RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 BPY2O14599 106 aa7.78□□□□□ -1.16
UBE3D-206ENST00000505226 IGKV4-1P06312 121 aa7.78□□□□□ -1.16
UBE3D-206ENST00000505226 NREPQ16612 68 aa7.78□□□□□ -1.16
UBE3D-206ENST00000505226 INAFM1C9JVW0 142 aa7.77□□□□□ -1.16
UBE3D-206ENST00000505226 C3orf84H3BNL1 204 aa7.77□□□□□ -1.17
UBE3D-206ENST00000505226 ESRGQ1W209 222 aa7.77□□□□□ -1.17
UBE3D-206ENST00000505226 SERTAD4-AS1Q5TG53 156 aa7.77□□□□□ -1.17
UBE3D-206ENST00000505226 FP248Q71RG6 208 aaPredicted RBP7.77□□□□□ -1.17
UBE3D-206ENST00000505226 Q6ZTC4 211 aa7.76□□□□□ -1.17
UBE3D-206ENST00000505226 DEFB105AQ8NG35 78 aa7.76□□□□□ -1.17
UBE3D-206ENST00000505226 Q8N377 158 aa7.76□□□□□ -1.17
UBE3D-206ENST00000505226 TMEM254Q8TBM7 123 aa7.74□□□□□ -1.17
UBE3D-206ENST00000505226 OCR1Q9BZK8 76 aa7.74□□□□□ -1.17
UBE3D-206ENST00000505226 LINC00474Q9P2X8 69 aa7.74□□□□□ -1.17
UBE3D-206ENST00000505226 C7orf33Q8WU49 177 aa7.73□□□□□ -1.17
UBE3D-206ENST00000505226 KCNQ1DNQ9H478 68 aa7.73□□□□□ -1.17
UBE3D-206ENST00000505226 IGKV2D-24A0A075B6R9 120 aa7.72□□□□□ -1.17
UBE3D-206ENST00000505226 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
UBE3D-206ENST00000505226 CMYA5Q8N3K9 4069 aa7.71□□□□□ -1.17
UBE3D-206ENST00000505226 C1orf43Q9BWL3 253 aa7.71□□□□□ -1.17
UBE3D-206ENST00000505226 FAM168BA1KXE4 195 aa7.71□□□□□ -1.18
UBE3D-206ENST00000505226 H3BNG1 76 aa7.71□□□□□ -1.18
UBE3D-206ENST00000505226 SYCNQ0VAF6 134 aa7.71□□□□□ -1.18
UBE3D-206ENST00000505226 LINC00336Q6ZUF6 198 aa7.71□□□□□ -1.18
UBE3D-206ENST00000505226 IGLV5-48A0A075B6I7 105 aa7.7□□□□□ -1.18
UBE3D-206ENST00000505226 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
UBE3D-206ENST00000505226 Q9BRP9 147 aa7.7□□□□□ -1.18
UBE3D-206ENST00000505226 NDUFC1O43677 76 aa7.7□□□□□ -1.18
UBE3D-206ENST00000505226 KRTAP10-11P60412 298 aa7.7□□□□□ -1.18
UBE3D-206ENST00000505226 A0A1W2PNM2 257 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 FAM229BQ4G0N7 80 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 A0A0U1RQV1 116 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 KRTAP7-1Q8IUC3 87 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 ST20-AS1Q8NBB2 130 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 MRAPQ8TCY5 172 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 ERC2-IT1O76042 136 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 NKAPP1Q8N9T2 125 aa7.69□□□□□ -1.18
UBE3D-206ENST00000505226 SMIM26A0A096LP01 95 aa7.68□□□□□ -1.18
UBE3D-206ENST00000505226 KRTAP4-16G5E9R7 235 aaPredicted RBP7.68□□□□□ -1.18
UBE3D-206ENST00000505226 HIGD2AQ9BW72 106 aa7.68□□□□□ -1.18
UBE3D-206ENST00000505226 FLNBO75369 2602 aaKnown RBP7.68□□□□□ -1.18
UBE3D-206ENST00000505226 LINC01556Q5JQF7 62 aa7.67□□□□□ -1.18
UBE3D-206ENST00000505226 CASC10Q5T4H9 136 aa7.67□□□□□ -1.18
UBE3D-206ENST00000505226 BAHCC1Q9P281 2608 aa7.67□□□□□ -1.18
UBE3D-206ENST00000505226 J3QKU1 62 aa7.67□□□□□ -1.18
UBE3D-206ENST00000505226 KMT2BQ9UMN6 2715 aaPredicted RBP7.67□□□□□ -1.18
UBE3D-206ENST00000505226 Q6ZRX8 168 aa7.66□□□□□ -1.18
UBE3D-206ENST00000505226 TNP2Q05952 138 aa7.66□□□□□ -1.18
UBE3D-206ENST00000505226 PRYO14603 147 aa7.65□□□□□ -1.18
UBE3D-206ENST00000505226 SMIM29Q86T20 159 aa7.65□□□□□ -1.18
UBE3D-206ENST00000505226 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.19
UBE3D-206ENST00000505226 IGLV1-50A0A075B6I6 118 aa7.64□□□□□ -1.19
UBE3D-206ENST00000505226 F8P00451 2351 aa7.64□□□□□ -1.19
UBE3D-206ENST00000505226 FBN1P35555 2871 aaKnown RBP7.64□□□□□ -1.19
UBE3D-206ENST00000505226 MAST4O15021 2626 aa7.63□□□□□ -1.19
UBE3D-206ENST00000505226 DEFB131BA0A096LNP1 70 aa7.63□□□□□ -1.19
UBE3D-206ENST00000505226 PKIGQ9Y2B9 76 aa7.63□□□□□ -1.19
UBE3D-206ENST00000505226 DNAH10Q8IVF4 4471 aa7.63□□□□□ -1.19
UBE3D-206ENST00000505226 SPRR1AP35321 89 aa7.63□□□□□ -1.19
UBE3D-206ENST00000505226 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
UBE3D-206ENST00000505226 A0A0G2JQZ4 141 aa7.62□□□□□ -1.19
UBE3D-206ENST00000505226 A0A1W2PNN7 141 aa7.62□□□□□ -1.19
UBE3D-206ENST00000505226 ATP5EP56381 51 aaPredicted RBP7.62□□□□□ -1.19
UBE3D-206ENST00000505226 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
UBE3D-206ENST00000505226 F8WDY8 70 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 FUSP35637 526 aaKnown RBP eCLIP7.61□□□□□ -1.19
UBE3D-206ENST00000505226 DSCR10P59022 87 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 LYSTQ99698 3801 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 PRO0628Q9UI54 55 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 DNAH3Q8TD57 4116 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 DNAH10OSP0CZ25 163 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 STAB1Q9NY15 2570 aa7.61□□□□□ -1.19
UBE3D-206ENST00000505226 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
UBE3D-206ENST00000505226 Q8NBF4 154 aa7.6□□□□□ -1.19
UBE3D-206ENST00000505226 NOTCH1P46531 2555 aa7.6□□□□□ -1.19
UBE3D-206ENST00000505226 ETDCA0A1B0GVM5 59 aa7.59□□□□□ -1.19
UBE3D-206ENST00000505226 MPLKIPQ8TAP9 179 aa7.59□□□□□ -1.19
UBE3D-206ENST00000505226 K7EQZ3 153 aa7.59□□□□□ -1.19
UBE3D-206ENST00000505226 C11orf45Q8TAV5 145 aa7.59□□□□□ -1.19
UBE3D-206ENST00000505226 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
UBE3D-206ENST00000505226 IGLV5-37A0A075B6J1 123 aa7.58□□□□□ -1.2
UBE3D-206ENST00000505226 LCE6AA0A183 80 aa7.58□□□□□ -1.2
UBE3D-206ENST00000505226 LINC00588Q9Y4M8 146 aa7.57□□□□□ -1.2
UBE3D-206ENST00000505226 MRPL55Q7Z7F7 128 aaKnown RBP7.56□□□□□ -1.2
UBE3D-206ENST00000505226 A0A1B0GW54 56 aa7.55□□□□□ -1.2
UBE3D-206ENST00000505226 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
UBE3D-206ENST00000505226 UBE2BP63146 152 aa7.54□□□□□ -1.2
UBE3D-206ENST00000505226 ZCCHC13Q8WW36 166 aaKnown RBP7.54□□□□□ -1.2
UBE3D-206ENST00000505226 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
UBE3D-206ENST00000505226 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
UBE3D-206ENST00000505226 LINC00476Q8WZB0 136 aa7.53□□□□□ -1.2
UBE3D-206ENST00000505226 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
UBE3D-206ENST00000505226 LRCOL1A6NCL2 159 aa7.53□□□□□ -1.2
UBE3D-206ENST00000505226 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.52□□□□□ -1.21
UBE3D-206ENST00000505226 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
UBE3D-206ENST00000505226 NBEAL1Q6ZS30 2694 aa7.51□□□□□ -1.21
UBE3D-206ENST00000505226 hDV103S1A0JD37 113 aa7.51□□□□□ -1.21
UBE3D-206ENST00000505226 REG3GQ6UW15 175 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms