RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 VPS13DQ5THJ4 4388 aa9.29□□□□□ -0.92
PARP1-209ENST00000498787 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.29□□□□□ -0.92
PARP1-209ENST00000498787 ETDCA0A1B0GVM5 59 aa9.28□□□□□ -0.92
PARP1-209ENST00000498787 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
PARP1-209ENST00000498787 RTL8CO15255 209 aa9.27□□□□□ -0.93
PARP1-209ENST00000498787 DHRS4-AS1Q9P1J3 65 aa9.27□□□□□ -0.93
PARP1-209ENST00000498787 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
PARP1-209ENST00000498787 SPRR1AP35321 89 aa9.26□□□□□ -0.93
PARP1-209ENST00000498787 DPH3Q96FX2 82 aa9.26□□□□□ -0.93
PARP1-209ENST00000498787 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
PARP1-209ENST00000498787 A0A1W2PNN7 141 aa9.24□□□□□ -0.93
PARP1-209ENST00000498787 RPL37AP8A6NKH3 93 aa9.24□□□□□ -0.93
PARP1-209ENST00000498787 JMJD7-PLA2G4BH0Y9G9 81 aa9.24□□□□□ -0.93
PARP1-209ENST00000498787 REG3GQ6UW15 175 aa9.24□□□□□ -0.93
PARP1-209ENST00000498787 KRTAP7-1Q8IUC3 87 aa9.23□□□□□ -0.93
PARP1-209ENST00000498787 TEX49A0A1B0GTD5 131 aa9.22□□□□□ -0.93
PARP1-209ENST00000498787 UBE2BP63146 152 aa9.22□□□□□ -0.93
PARP1-209ENST00000498787 Q6ZRX8 168 aa9.22□□□□□ -0.93
PARP1-209ENST00000498787 TENM2Q9NT68 2774 aa9.22□□□□□ -0.93
PARP1-209ENST00000498787 B5MCH6 92 aa9.21□□□□□ -0.94
PARP1-209ENST00000498787 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.94
PARP1-209ENST00000498787 Q6ZQY7 126 aa9.21□□□□□ -0.94
PARP1-209ENST00000498787 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
PARP1-209ENST00000498787 EPM2AB3EWF7 344 aa9.19□□□□□ -0.94
PARP1-209ENST00000498787 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
PARP1-209ENST00000498787 CHTF8P0CG12 524 aa9.19□□□□□ -0.94
PARP1-209ENST00000498787 TNP2Q05952 138 aa9.19□□□□□ -0.94
PARP1-209ENST00000498787 ALMS1Q8TCU4 4167 aa9.19□□□□□ -0.94
PARP1-209ENST00000498787 ACYP1P07311 99 aa9.18□□□□□ -0.94
PARP1-209ENST00000498787 VPS25Q9BRG1 176 aa9.18□□□□□ -0.94
PARP1-209ENST00000498787 LYSTQ99698 3801 aa9.18□□□□□ -0.94
PARP1-209ENST00000498787 DNAH6Q9C0G6 4158 aa9.17□□□□□ -0.94
PARP1-209ENST00000498787 LCE6AA0A183 80 aa9.17□□□□□ -0.94
PARP1-209ENST00000498787 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
PARP1-209ENST00000498787 OBSCN-AS1Q96MR7 158 aa9.17□□□□□ -0.94
PARP1-209ENST00000498787 H0Y9J4 135 aa9.16□□□□□ -0.94
PARP1-209ENST00000498787 LAMTOR3Q9UHA4 124 aa9.16□□□□□ -0.94
PARP1-209ENST00000498787 PDE6GP18545 87 aa9.15□□□□□ -0.94
PARP1-209ENST00000498787 LINC00336Q6ZUF6 198 aa9.15□□□□□ -0.94
PARP1-209ENST00000498787 PHF5AQ7RTV0 110 aaKnown RBP9.15□□□□□ -0.94
PARP1-209ENST00000498787 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
PARP1-209ENST00000498787 RBM3P98179 157 aaKnown RBP9.14□□□□□ -0.95
PARP1-209ENST00000498787 PLAC8Q9NZF1 115 aa9.14□□□□□ -0.95
PARP1-209ENST00000498787 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
PARP1-209ENST00000498787 BCE1O60756 84 aa9.11□□□□□ -0.95
PARP1-209ENST00000498787 UBE2AP49459 152 aa9.11□□□□□ -0.95
PARP1-209ENST00000498787 DSCR8Q96T75 97 aa9.11□□□□□ -0.95
PARP1-209ENST00000498787 TGP01266 2768 aa9.11□□□□□ -0.95
PARP1-209ENST00000498787 DNAH10Q8IVF4 4471 aa9.11□□□□□ -0.95
PARP1-209ENST00000498787 NDUFV3P56181 108 aaKnown RBP9.1□□□□□ -0.95
PARP1-209ENST00000498787 Q9BRP9 147 aa9.1□□□□□ -0.95
PARP1-209ENST00000498787 PANO1I0J062 215 aa9.09□□□□□ -0.95
PARP1-209ENST00000498787 C14orf132Q9NPU4 83 aa9.09□□□□□ -0.95
PARP1-209ENST00000498787 IGLV5-48A0A075B6I7 105 aa9.08□□□□□ -0.96
PARP1-209ENST00000498787 LOC110117498A0A087WWA1 95 aa9.07□□□□□ -0.96
PARP1-209ENST00000498787 CCKP06307 115 aa9.07□□□□□ -0.96
PARP1-209ENST00000498787 GAGE2AQ6NT46 116 aa9.07□□□□□ -0.96
PARP1-209ENST00000498787 SMCR5Q8TEV8 140 aa9.07□□□□□ -0.96
PARP1-209ENST00000498787 KRTAP10-2P60368 255 aa9.05□□□□□ -0.96
PARP1-209ENST00000498787 DEFB105AQ8NG35 78 aa9.05□□□□□ -0.96
PARP1-209ENST00000498787 HIGD2AQ9BW72 106 aa9.05□□□□□ -0.96
PARP1-209ENST00000498787 PRLHP81277 87 aa9.04□□□□□ -0.96
PARP1-209ENST00000498787 Q8N377 158 aa9.04□□□□□ -0.96
PARP1-209ENST00000498787 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
PARP1-209ENST00000498787 KMT2AQ03164 3969 aa9.04□□□□□ -0.96
PARP1-209ENST00000498787 F8WEM9 126 aa9.03□□□□□ -0.96
PARP1-209ENST00000498787 FUSP35637 526 aaKnown RBP eCLIP9.03□□□□□ -0.96
PARP1-209ENST00000498787 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
PARP1-209ENST00000498787 CDIP1Q9H305 208 aa9.02□□□□□ -0.97
PARP1-209ENST00000498787 DNAH2Q9P225 4427 aa9.02□□□□□ -0.97
PARP1-209ENST00000498787 TRBV7-4A0A0J9YYF1 115 aa9.01□□□□□ -0.97
PARP1-209ENST00000498787 ERC2-IT1O76042 136 aa9.01□□□□□ -0.97
PARP1-209ENST00000498787 Q6ZQT0 140 aa9.01□□□□□ -0.97
PARP1-209ENST00000498787 Q6ZSA8 131 aa9.01□□□□□ -0.97
PARP1-209ENST00000498787 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
PARP1-209ENST00000498787 A0A1B0GW54 56 aa9□□□□□ -0.97
PARP1-209ENST00000498787 KRTAP11-1Q8IUC1 163 aa9□□□□□ -0.97
PARP1-209ENST00000498787 DNAH17Q9UFH2 4485 aa8.99□□□□□ -0.97
PARP1-209ENST00000498787 A0A1B0GV72 72 aa8.99□□□□□ -0.97
PARP1-209ENST00000498787 SPRR1BP22528 89 aa8.99□□□□□ -0.97
PARP1-209ENST00000498787 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
PARP1-209ENST00000498787 ST20-AS1Q8NBB2 130 aa8.99□□□□□ -0.97
PARP1-209ENST00000498787 PSORS1C2Q9UIG4 136 aa8.99□□□□□ -0.97
PARP1-209ENST00000498787 C1orf137Q5JT78 98 aa8.98□□□□□ -0.97
PARP1-209ENST00000498787 LINC00643Q86TS7 51 aa8.98□□□□□ -0.97
PARP1-209ENST00000498787 CIRBP-AS1Q8TBR5 109 aa8.97□□□□□ -0.97
PARP1-209ENST00000498787 ZNF861PO60384 105 aa8.96□□□□□ -0.98
PARP1-209ENST00000498787 KRTAP10-1P60331 282 aa8.96□□□□□ -0.98
PARP1-209ENST00000498787 UBL5Q9BZL1 73 aa8.96□□□□□ -0.98
PARP1-209ENST00000498787 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
PARP1-209ENST00000498787 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
PARP1-209ENST00000498787 IGLV8-61A0A075B6I0 122 aa8.93□□□□□ -0.98
PARP1-209ENST00000498787 Q6JHZ5 121 aa8.93□□□□□ -0.98
PARP1-209ENST00000498787 HECTD4Q9Y4D8 3996 aa8.93□□□□□ -0.98
PARP1-209ENST00000498787 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
PARP1-209ENST00000498787 XGP55808 180 aa8.92□□□□□ -0.98
PARP1-209ENST00000498787 SMIM29Q86T20 159 aa8.92□□□□□ -0.98
PARP1-209ENST00000498787 LINC00846Q9NV44 126 aa8.92□□□□□ -0.98
PARP1-209ENST00000498787 SCGB1A1P11684 91 aa8.91□□□□□ -0.98
PARP1-209ENST00000498787 ATP5EP2Q5VTU8 51 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms