RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 TTTY10Q9BZA0 68 aa3.54□□□□□ -1.84
PDCD4-211ENST00000498367 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
PDCD4-211ENST00000498367 DEFB123Q8N688 67 aa3.52□□□□□ -1.85
PDCD4-211ENST00000498367 LOC730098B7Z3J9 87 aa3.51□□□□□ -1.85
PDCD4-211ENST00000498367 ASXL3Q9C0F0 2248 aa3.51□□□□□ -1.85
PDCD4-211ENST00000498367 AHCTF1Q8WYP5 2266 aa3.5□□□□□ -1.85
PDCD4-211ENST00000498367 ASCC3Q8N3C0 2202 aaKnown RBP3.49□□□□□ -1.85
PDCD4-211ENST00000498367 NOTCH3Q9UM47 2321 aa3.49□□□□□ -1.85
PDCD4-211ENST00000498367 ICE1Q9Y2F5 2266 aa3.49□□□□□ -1.85
PDCD4-211ENST00000498367 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
PDCD4-211ENST00000498367 LYNX1P0DP58 116 aa3.47□□□□□ -1.85
PDCD4-211ENST00000498367 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
PDCD4-211ENST00000498367 SORL1Q92673 2214 aa3.47□□□□□ -1.85
PDCD4-211ENST00000498367 CNOT1A5YKK6 2376 aaKnown RBP3.46□□□□□ -1.86
PDCD4-211ENST00000498367 CACNA1EQ15878 2313 aa3.45□□□□□ -1.86
PDCD4-211ENST00000498367 I3L2K1 104 aa3.45□□□□□ -1.86
PDCD4-211ENST00000498367 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
PDCD4-211ENST00000498367 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
PDCD4-211ENST00000498367 IGLV5-48A0A075B6I7 105 aa3.43□□□□□ -1.86
PDCD4-211ENST00000498367 H0YAA0 97 aa3.42□□□□□ -1.86
PDCD4-211ENST00000498367 BRD3OSQ6XYD6 125 aa3.42□□□□□ -1.86
PDCD4-211ENST00000498367 RPL39P62891 51 aaKnown RBP3.41□□□□□ -1.86
PDCD4-211ENST00000498367 DEFB103AP81534 67 aa3.4□□□□□ -1.87
PDCD4-211ENST00000498367 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
PDCD4-211ENST00000498367 PDE4DIPQ5VU43 2346 aa3.39□□□□□ -1.87
PDCD4-211ENST00000498367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.39□□□□□ -1.873e-9■■■■■ 30.4
PDCD4-211ENST00000498367 WFDC10BQ8IUB3 73 aa3.38□□□□□ -1.87
PDCD4-211ENST00000498367 WFDC13Q8IUB5 93 aa3.38□□□□□ -1.87
PDCD4-211ENST00000498367 COX6A2Q02221 97 aa3.37□□□□□ -1.87
PDCD4-211ENST00000498367 DEFB131AP59861 70 aa3.36□□□□□ -1.87
PDCD4-211ENST00000498367 RPL39LQ96EH5 51 aaKnown RBP3.36□□□□□ -1.87
PDCD4-211ENST00000498367 PRCDQ00LT1 54 aa3.35□□□□□ -1.87
PDCD4-211ENST00000498367 A0A1B0GVY2 172 aa3.34□□□□□ -1.87
PDCD4-211ENST00000498367 H3BSH0 61 aa3.34□□□□□ -1.87
PDCD4-211ENST00000498367 Q6ZSA8 131 aa3.34□□□□□ -1.87
PDCD4-211ENST00000498367 K7EIL1 84 aa3.32□□□□□ -1.88
PDCD4-211ENST00000498367 H1FX-AS1Q4G0G2 97 aa3.32□□□□□ -1.88
PDCD4-211ENST00000498367 RPS27P42677 84 aaKnown RBP3.31□□□□□ -1.88
PDCD4-211ENST00000498367 CACNA1GO43497 2377 aa3.31□□□□□ -1.88
PDCD4-211ENST00000498367 H3BUA1 57 aa3.29□□□□□ -1.88
PDCD4-211ENST00000498367 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
PDCD4-211ENST00000498367 FAM208BQ5VWN6 2430 aa3.29□□□□□ -1.88
PDCD4-211ENST00000498367 NAV3Q8IVL0 2385 aa3.28□□□□□ -1.88
PDCD4-211ENST00000498367 CACNA1BQ00975 2339 aa3.27□□□□□ -1.89
PDCD4-211ENST00000498367 PTPRQQ9UMZ3 2332 aa3.27□□□□□ -1.89
PDCD4-211ENST00000498367 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
PDCD4-211ENST00000498367 PRO0255Q9UI72 69 aa3.27□□□□□ -1.89
PDCD4-211ENST00000498367 TRIOBPQ9H2D6 2365 aa3.27□□□□□ -1.89
PDCD4-211ENST00000498367 DOPEY2Q9Y3R5 2298 aa3.27□□□□□ -1.89
PDCD4-211ENST00000498367 ALMS1Q8TCU4 4167 aa3.26□□□□□ -1.89
PDCD4-211ENST00000498367 SPINK9Q5DT21 86 aa3.26□□□□□ -1.89
PDCD4-211ENST00000498367 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
PDCD4-211ENST00000498367 KAAG1Q9UBP8 84 aa3.26□□□□□ -1.89
PDCD4-211ENST00000498367 DEFB130BP0DP73 79 aa3.25□□□□□ -1.89
PDCD4-211ENST00000498367 DEFB130AP0DP74 79 aa3.25□□□□□ -1.89
PDCD4-211ENST00000498367 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
PDCD4-211ENST00000498367 KRTAP10-1P60331 282 aa3.24□□□□□ -1.89
PDCD4-211ENST00000498367 DEFB119Q8N690 84 aa3.24□□□□□ -1.89
PDCD4-211ENST00000498367 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
PDCD4-211ENST00000498367 KNL1Q8NG31 2342 aa3.22□□□□□ -1.89
PDCD4-211ENST00000498367 M0QY20 66 aa3.22□□□□□ -1.89
PDCD4-211ENST00000498367 WT1-ASQ06250 92 aa3.22□□□□□ -1.89
PDCD4-211ENST00000498367 Q5VSD8 79 aa3.22□□□□□ -1.89
PDCD4-211ENST00000498367 COL6A6A6NMZ7 2263 aa3.21□□□□□ -1.9
PDCD4-211ENST00000498367 ZDBF2Q9HCK1 2354 aa3.2□□□□□ -1.9
PDCD4-211ENST00000498367 OTOGLQ3ZCN5 2332 aa3.2□□□□□ -1.9
PDCD4-211ENST00000498367 PIEZO2Q9H5I5 2752 aa3.2□□□□□ -1.9
PDCD4-211ENST00000498367 DEFB109BQ30KR1 87 aa3.2□□□□□ -1.9
PDCD4-211ENST00000498367 LEAP2Q969E1 77 aa3.2□□□□□ -1.9
PDCD4-211ENST00000498367 APLNQ9ULZ1 77 aa3.2□□□□□ -1.9
PDCD4-211ENST00000498367 FLG2Q5D862 2391 aaPredicted RBP3.2□□□□□ -1.9
PDCD4-211ENST00000498367 MMP24-AS1A0A0U1RRL7 71 aa3.19□□□□□ -1.9
PDCD4-211ENST00000498367 SPRR1AP35321 89 aa3.18□□□□□ -1.9
PDCD4-211ENST00000498367 WNK2Q9Y3S1 2297 aa3.18□□□□□ -1.9
PDCD4-211ENST00000498367 BAHCC1Q9P281 2608 aa3.18□□□□□ -1.9
PDCD4-211ENST00000498367 JMJD1CQ15652 2540 aa3.17□□□□□ -1.9
PDCD4-211ENST00000498367 LELP1Q5T871 98 aa3.17□□□□□ -1.9
PDCD4-211ENST00000498367 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
PDCD4-211ENST00000498367 DEFB105AQ8NG35 78 aa3.17□□□□□ -1.9
PDCD4-211ENST00000498367 TPRP12270 2363 aaKnown RBP3.12□□□□□ -1.91
PDCD4-211ENST00000498367 NOTCH2Q04721 2471 aa3.12□□□□□ -1.91
PDCD4-211ENST00000498367 CNTRLQ7Z7A1 2325 aa3.1□□□□□ -1.91
PDCD4-211ENST00000498367 TMEM167AQ8TBQ9 72 aa3.09□□□□□ -1.91
PDCD4-211ENST00000498367 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.91
PDCD4-211ENST00000498367 PTPRZ1P23471 2315 aaPredicted RBP3.08□□□□□ -1.92
PDCD4-211ENST00000498367 K7EIM0 57 aa3.06□□□□□ -1.92
PDCD4-211ENST00000498367 SPRR1BP22528 89 aa3.06□□□□□ -1.92
PDCD4-211ENST00000498367 PRLHP81277 87 aa3.06□□□□□ -1.92
PDCD4-211ENST00000498367 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
PDCD4-211ENST00000498367 KRTAP13-3Q3SY46 172 aa3.04□□□□□ -1.92
PDCD4-211ENST00000498367 NOP10Q9NPE3 64 aaKnown RBP3.04□□□□□ -1.92
PDCD4-211ENST00000498367 CLPSL2Q6UWE3 100 aa3.02□□□□□ -1.93
PDCD4-211ENST00000498367 PKDREJQ9NTG1 2253 aa3.01□□□□□ -1.93
PDCD4-211ENST00000498367 S4R3F8 94 aa3□□□□□ -1.93
PDCD4-211ENST00000498367 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
PDCD4-211ENST00000498367 PLCE1Q9P212 2302 aa2.99□□□□□ -1.93
PDCD4-211ENST00000498367 A8MTW9 85 aa2.97□□□□□ -1.93
PDCD4-211ENST00000498367 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
PDCD4-211ENST00000498367 ZNF462Q96JM2 2506 aa2.97□□□□□ -1.93
PDCD4-211ENST00000498367 ROS1P08922 2347 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms