RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 PRB4P10163 310 aaPredicted RBP1.23□□□□□ -2.21
CBX3-208ENST00000497498 PDE6GP18545 87 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 XCL1P47992 114 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 ZNF137PP52743 207 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 ERHP84090 104 aaKnown RBP1.23□□□□□ -2.21
CBX3-208ENST00000497498 CIRBPQ14011 172 aaKnown RBP1.23□□□□□ -2.21
CBX3-208ENST00000497498 Q1T7F1 81 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.23□□□□□ -2.21
CBX3-208ENST00000497498 GDF5OSQ5U4N7 250 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 SPANXN1Q5VSR9 72 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 C10orf113Q5VZT2 155 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 ATP11AUNQ6ZP68 121 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 C7orf65Q6ZTY9 151 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 LCA10Q71F78 164 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 PHF5AQ7RTV0 110 aaKnown RBP1.23□□□□□ -2.21
CBX3-208ENST00000497498 VN1R4Q7Z5H5 301 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 Q86TA4 180 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 DYNAPQ8N1N2 210 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 C20orf197Q8N268 126 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 FAM216BQ8N7L0 139 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 TMEM263Q8WUH6 116 aaKnown RBP1.23□□□□□ -2.21
CBX3-208ENST00000497498 CNFNQ9BYD5 112 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 CYP4F30PQ9H0H9 118 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 TMEM14CQ9P0S9 112 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 DOCK11Q5JSL3 2073 aa1.23□□□□□ -2.21
CBX3-208ENST00000497498 DNAH17Q9UFH2 4485 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 TANC2Q9HCD6 1990 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 IGLV3-32A0A0A0MS00 114 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 IGHV3-21A0A0B4J1V1 117 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 TRAV41A0A0B4J266 112 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 TMEM30CPA0ZSE6 113 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 E7EQL1 145 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 H0YGX0 51 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 H3BSH0 61 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 ZNF73O43830 326 aaPredicted RBP1.22□□□□□ -2.21
CBX3-208ENST00000497498 IGHV1-69P01742 117 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 ARMS2P0C7Q2 107 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 CGB3P0DN86 165 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 CGB7P0DN87 165 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 RPS27P42677 84 aaKnown RBP1.22□□□□□ -2.21
CBX3-208ENST00000497498 ZNF80P51504 273 aaPredicted RBP1.22□□□□□ -2.21
CBX3-208ENST00000497498 MIAQ16674 131 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 C10orf128Q5T292 105 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 SFTA2Q6UW10 78 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 MIR17HGQ75NE6 70 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 FAM19A3Q7Z5A8 133 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 DCANP1Q8TF63 244 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 CCL13Q99616 98 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 LIMD2Q9BT23 127 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 SMIM2Q9BVW6 85 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 TMEM14BQ9NUH8 114 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 UBE2D4Q9Y2X8 147 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 PHLDA3Q9Y5J5 127 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 FAT1Q14517 4588 aa1.22□□□□□ -2.21
CBX3-208ENST00000497498 DNAJC13O75165 2243 aa1.21□□□□□ -2.21
CBX3-208ENST00000497498 SYNE2Q8WXH0 6885 aaKnown RBP1.21□□□□□ -2.22
CBX3-208ENST00000497498 IGHV1-45A0A0A0MS14 117 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 IGHV3-43A0A0B4J1X8 118 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 F8WEM9 126 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 TMEM256-PLSCR3K7ERE1 68 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 M0R378 163 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 NDUFB1O75438 58 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 NDUFA3O95167 84 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 IGHV3-53P01767 116 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 CTSGP08311 255 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 BAALC-AS2P0C853 105 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 MIFP14174 115 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 ZNF22P17026 224 aaPredicted RBP1.21□□□□□ -2.22
CBX3-208ENST00000497498 FUSP35637 526 aaKnown RBP eCLIP1.21□□□□□ -2.22
CBX3-208ENST00000497498 PRCDQ00LT1 54 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 PIGYQ3MUY2 71 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 FAM27BQ5VT28 67 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 LYZL1Q6UWQ5 148 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 FP248Q71RG6 208 aaPredicted RBP1.21□□□□□ -2.22
CBX3-208ENST00000497498 COX14Q96I36 57 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 FAM167A-AS1Q96KT0 104 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 CCL26Q9Y258 94 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 LENEPQ9Y5L5 61 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 FREM3P0C091 2139 aa1.21□□□□□ -2.22
CBX3-208ENST00000497498 PKHD1L1Q86WI1 4243 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 CR1P17927 2039 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 KIAA1549Q9HCM3 1950 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 IGKV1-12A0A0C4DH73 117 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 FAM223BA6NKX1 122 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 C8orf87E5RJ46 101 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 I3L3M4 83 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 IGKV1D-12P01611 117 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 CRPP02741 224 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 CCL4P13236 92 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 MP68P56378 58 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 ELOF1P60002 83 aaKnown RBP1.2□□□□□ -2.22
CBX3-208ENST00000497498 FAM74A4Q5TZK3 123 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 LYPD5Q6UWN5 251 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 MUSTN1Q8IVN3 82 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 Q8N2B8 174 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 Q8N6K4 173 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 FDCSPQ8NFU4 85 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 SMCR5Q8TEV8 140 aa1.2□□□□□ -2.22
CBX3-208ENST00000497498 RNASE6Q93091 150 aaKnown RBP1.2□□□□□ -2.22
CBX3-208ENST00000497498 DIRC1Q969H9 104 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms