RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 YPEL4Q96NS1 127 aa9.56□□□□□ -0.88
COL9A1-210ENST00000493682 CRCT1Q9UGL9 99 aa9.56□□□□□ -0.88
COL9A1-210ENST00000493682 SNAPINO95295 136 aa9.55□□□□□ -0.88
COL9A1-210ENST00000493682 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
COL9A1-210ENST00000493682 MIEN1Q9BRT3 115 aa9.55□□□□□ -0.88
COL9A1-210ENST00000493682 TRAV23DV6A0A075B6W5 121 aa9.54□□□□□ -0.88
COL9A1-210ENST00000493682 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.54□□□□□ -0.88
COL9A1-210ENST00000493682 J3QQQ9 107 aa9.54□□□□□ -0.88
COL9A1-210ENST00000493682 NDUFC2O95298 119 aa9.54□□□□□ -0.88
COL9A1-210ENST00000493682 SVBPQ8N300 66 aa9.54□□□□□ -0.88
COL9A1-210ENST00000493682 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
COL9A1-210ENST00000493682 PLNP26678 52 aa9.52□□□□□ -0.89
COL9A1-210ENST00000493682 KRTAP19-2Q3LHN2 52 aa9.52□□□□□ -0.89
COL9A1-210ENST00000493682 ZNF73O43830 326 aaPredicted RBP9.51□□□□□ -0.89
COL9A1-210ENST00000493682 NMUP48645 174 aa9.51□□□□□ -0.89
COL9A1-210ENST00000493682 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
COL9A1-210ENST00000493682 LEPROTL1O95214 131 aa9.5□□□□□ -0.89
COL9A1-210ENST00000493682 SOSTDC1Q6X4U4 206 aa9.5□□□□□ -0.89
COL9A1-210ENST00000493682 C5orf52A6NGY3 159 aa9.49□□□□□ -0.89
COL9A1-210ENST00000493682 LGALS3P17931 250 aaKnown RBP9.49□□□□□ -0.89
COL9A1-210ENST00000493682 HERVK_113P61574 105 aa9.49□□□□□ -0.89
COL9A1-210ENST00000493682 DPM2O94777 84 aa9.48□□□□□ -0.89
COL9A1-210ENST00000493682 NPC2P61916 151 aa9.48□□□□□ -0.89
COL9A1-210ENST00000493682 PCOTHQ58A44 107 aa9.48□□□□□ -0.89
COL9A1-210ENST00000493682 PMCHL2Q9BQD1 86 aa9.48□□□□□ -0.89
COL9A1-210ENST00000493682 LINC00310P59036 64 aa9.47□□□□□ -0.89
COL9A1-210ENST00000493682 MT1HP80294 61 aa9.47□□□□□ -0.89
COL9A1-210ENST00000493682 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
COL9A1-210ENST00000493682 SERF1AO75920 110 aa9.46□□□□□ -0.9
COL9A1-210ENST00000493682 IGLV8-61A0A075B6I0 122 aa9.45□□□□□ -0.9
COL9A1-210ENST00000493682 IGKCP01834 107 aa9.45□□□□□ -0.9
COL9A1-210ENST00000493682 SPRR1BP22528 89 aa9.45□□□□□ -0.9
COL9A1-210ENST00000493682 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
COL9A1-210ENST00000493682 LIMD2Q9BT23 127 aa9.45□□□□□ -0.9
COL9A1-210ENST00000493682 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
COL9A1-210ENST00000493682 C9orf92A6NGG3 77 aa9.44□□□□□ -0.9
COL9A1-210ENST00000493682 HINT1P49773 126 aaPredicted RBP9.44□□□□□ -0.9
COL9A1-210ENST00000493682 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
COL9A1-210ENST00000493682 TRGC2P03986 189 aa9.43□□□□□ -0.9
COL9A1-210ENST00000493682 FABP4P15090 132 aa9.43□□□□□ -0.9
COL9A1-210ENST00000493682 CBY1Q9Y3M2 126 aa9.43□□□□□ -0.9
COL9A1-210ENST00000493682 SLC25A34Q6PIV7 304 aa9.42□□□□□ -0.9
COL9A1-210ENST00000493682 CFC1BP0CG36 223 aa9.41□□□□□ -0.9
COL9A1-210ENST00000493682 DHRS4-AS1Q9P1J3 65 aa9.4□□□□□ -0.9
COL9A1-210ENST00000493682 OR13C6PQ8NH95 151 aa9.39□□□□□ -0.91
COL9A1-210ENST00000493682 LAMTOR3Q9UHA4 124 aa9.39□□□□□ -0.91
COL9A1-210ENST00000493682 E9PLD3 99 aa9.38□□□□□ -0.91
COL9A1-210ENST00000493682 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
COL9A1-210ENST00000493682 LINC00308Q8TCZ7 52 aa9.37□□□□□ -0.91
COL9A1-210ENST00000493682 LITAFQ99732 161 aa9.37□□□□□ -0.91
COL9A1-210ENST00000493682 CD164Q04900 197 aa9.35□□□□□ -0.91
COL9A1-210ENST00000493682 KRTAP10-6P60371 365 aaPredicted RBP9.34□□□□□ -0.91
COL9A1-210ENST00000493682 Q1RN00 199 aa9.34□□□□□ -0.91
COL9A1-210ENST00000493682 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
COL9A1-210ENST00000493682 COX7BP24311 80 aa9.33□□□□□ -0.92
COL9A1-210ENST00000493682 ELOF1P60002 83 aaKnown RBP9.33□□□□□ -0.92
COL9A1-210ENST00000493682 TAL2Q16559 108 aa9.33□□□□□ -0.92
COL9A1-210ENST00000493682 ANKRD39Q53RE8 183 aa9.33□□□□□ -0.92
COL9A1-210ENST00000493682 DEFB105AQ8NG35 78 aa9.33□□□□□ -0.92
COL9A1-210ENST00000493682 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
COL9A1-210ENST00000493682 H7C2G1 150 aa9.32□□□□□ -0.92
COL9A1-210ENST00000493682 TIMM17BO60830 172 aa9.32□□□□□ -0.92
COL9A1-210ENST00000493682 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
COL9A1-210ENST00000493682 TEX49A0A1B0GTD5 131 aa9.3□□□□□ -0.92
COL9A1-210ENST00000493682 C1orf195Q5TG92 126 aa9.29□□□□□ -0.92
COL9A1-210ENST00000493682 Q5XG85 94 aa9.29□□□□□ -0.92
COL9A1-210ENST00000493682 SMIM29Q86T20 159 aa9.28□□□□□ -0.92
COL9A1-210ENST00000493682 LINC00518Q8N0U6 118 aa9.28□□□□□ -0.92
COL9A1-210ENST00000493682 SYS1-DBNDD2H3BUS1 97 aa9.27□□□□□ -0.93
COL9A1-210ENST00000493682 AKR1D1P51857 326 aa9.27□□□□□ -0.93
COL9A1-210ENST00000493682 ZNF815PA8K554 130 aa9.26□□□□□ -0.93
COL9A1-210ENST00000493682 M0R2T5 61 aa9.26□□□□□ -0.93
COL9A1-210ENST00000493682 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
COL9A1-210ENST00000493682 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
COL9A1-210ENST00000493682 TTTY13Q9BZ97 58 aa9.25□□□□□ -0.93
COL9A1-210ENST00000493682 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
COL9A1-210ENST00000493682 COLCA2A8K830 154 aa9.24□□□□□ -0.93
COL9A1-210ENST00000493682 LINC01545Q5VT33 79 aa9.23□□□□□ -0.93
COL9A1-210ENST00000493682 COX6B2Q6YFQ2 88 aa9.23□□□□□ -0.93
COL9A1-210ENST00000493682 IGLV5-48A0A075B6I7 105 aa9.22□□□□□ -0.93
COL9A1-210ENST00000493682 A0A1B0GWB2 263 aa9.21□□□□□ -0.94
COL9A1-210ENST00000493682 LCE3BQ5TA77 95 aa9.21□□□□□ -0.94
COL9A1-210ENST00000493682 KRTAP4-12Q9BQ66 201 aa9.21□□□□□ -0.94
COL9A1-210ENST00000493682 FLGP20930 4061 aaPredicted RBP9.18□□□□□ -0.94
COL9A1-210ENST00000493682 PET117Q6UWS5 81 aa9.18□□□□□ -0.94
COL9A1-210ENST00000493682 A6NDN8 102 aa9.16□□□□□ -0.94
COL9A1-210ENST00000493682 TCL1BO95988 128 aa9.15□□□□□ -0.94
COL9A1-210ENST00000493682 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
COL9A1-210ENST00000493682 HIST1H2BKO60814 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BJP06899 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BOP23527 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BBP33778 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BDP58876 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BCP62807 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST2H2BEQ16778 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.14□□□□□ -0.95
COL9A1-210ENST00000493682 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BHQ93079 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BNQ99877 126 aa9.14□□□□□ -0.95
COL9A1-210ENST00000493682 HIST1H2BMQ99879 126 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms