RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 SPANXB1Q9NS25 103 aaPredicted RBP7.11□□□□□ -1.27
SAMM50-205ENST00000493621 E9PLD3 99 aa7.1□□□□□ -1.27
SAMM50-205ENST00000493621 HBDP02042 147 aa7.1□□□□□ -1.27
SAMM50-205ENST00000493621 PRLHP81277 87 aa7.1□□□□□ -1.27
SAMM50-205ENST00000493621 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
SAMM50-205ENST00000493621 SPINK8P0C7L1 97 aa7.09□□□□□ -1.27
SAMM50-205ENST00000493621 SCGB3A1Q96QR1 104 aa7.09□□□□□ -1.27
SAMM50-205ENST00000493621 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
SAMM50-205ENST00000493621 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
SAMM50-205ENST00000493621 FAM19A1Q7Z5A9 133 aa7.08□□□□□ -1.28
SAMM50-205ENST00000493621 LINC01546A6NGU7 62 aa7.07□□□□□ -1.28
SAMM50-205ENST00000493621 ATP5LO75964 103 aa7.07□□□□□ -1.28
SAMM50-205ENST00000493621 C3orf22Q8N5N4 141 aa7.07□□□□□ -1.28
SAMM50-205ENST00000493621 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
SAMM50-205ENST00000493621 H0Y8G0 127 aa7.06□□□□□ -1.28
SAMM50-205ENST00000493621 H3BMG7 143 aa7.06□□□□□ -1.28
SAMM50-205ENST00000493621 PFN2P35080 140 aa7.06□□□□□ -1.28
SAMM50-205ENST00000493621 CEND1Q8N111 149 aa7.06□□□□□ -1.28
SAMM50-205ENST00000493621 TMEM126AQ9H061 195 aa7.06□□□□□ -1.28
SAMM50-205ENST00000493621 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
SAMM50-205ENST00000493621 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
SAMM50-205ENST00000493621 VPREB1P12018 145 aa7.04□□□□□ -1.28
SAMM50-205ENST00000493621 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
SAMM50-205ENST00000493621 M0R378 163 aa7.03□□□□□ -1.28
SAMM50-205ENST00000493621 NMUP48645 174 aa7.03□□□□□ -1.28
SAMM50-205ENST00000493621 SND1-IT1Q9HBX3 110 aa7.03□□□□□ -1.28
SAMM50-205ENST00000493621 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
SAMM50-205ENST00000493621 DPM2O94777 84 aa7.02□□□□□ -1.29
SAMM50-205ENST00000493621 PMVKQ15126 192 aa7.02□□□□□ -1.29
SAMM50-205ENST00000493621 SPAG11AQ6PDA7 123 aa7.02□□□□□ -1.29
SAMM50-205ENST00000493621 HIGD2AQ9BW72 106 aa7.02□□□□□ -1.29
SAMM50-205ENST00000493621 A0A096LNJ9 63 aa7.01□□□□□ -1.29
SAMM50-205ENST00000493621 IGKCP01834 107 aa7.01□□□□□ -1.29
SAMM50-205ENST00000493621 FXYD2P54710 66 aa7.01□□□□□ -1.29
SAMM50-205ENST00000493621 FP248Q71RG6 208 aaPredicted RBP7.01□□□□□ -1.29
SAMM50-205ENST00000493621 LINC00337Q8N6G1 96 aa7.01□□□□□ -1.29
SAMM50-205ENST00000493621 PPDPFLQ8WWR9 84 aa7.01□□□□□ -1.29
SAMM50-205ENST00000493621 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
SAMM50-205ENST00000493621 PRO0461Q9UI25 63 aa7.01□□□□□ -1.29
SAMM50-205ENST00000493621 TRBV20-1A0A075B6N2 111 aa7□□□□□ -1.29
SAMM50-205ENST00000493621 LINC01549A6NIU2 74 aa7□□□□□ -1.29
SAMM50-205ENST00000493621 PLNP26678 52 aa7□□□□□ -1.29
SAMM50-205ENST00000493621 Q8NDZ9 215 aa7□□□□□ -1.29
SAMM50-205ENST00000493621 NHP2Q9NX24 153 aaKnown RBP7□□□□□ -1.29
SAMM50-205ENST00000493621 IGLV5-39A0A0G2JS06 123 aa6.99□□□□□ -1.29
SAMM50-205ENST00000493621 LINC01547P58512 204 aaPredicted RBP6.99□□□□□ -1.29
SAMM50-205ENST00000493621 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
SAMM50-205ENST00000493621 C4orf48Q5BLP8 95 aa6.99□□□□□ -1.29
SAMM50-205ENST00000493621 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
SAMM50-205ENST00000493621 ZNF625Q96I27 306 aaPredicted RBP6.99□□□□□ -1.29
SAMM50-205ENST00000493621 SPRR4Q96PI1 79 aa6.99□□□□□ -1.29
SAMM50-205ENST00000493621 COX17Q14061 63 aa6.98□□□□□ -1.29
SAMM50-205ENST00000493621 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
SAMM50-205ENST00000493621 ASB16-AS1Q495Z4 193 aa6.98□□□□□ -1.29
SAMM50-205ENST00000493621 Q6Q795 121 aa6.98□□□□□ -1.29
SAMM50-205ENST00000493621 ZNF22P17026 224 aaPredicted RBP6.97□□□□□ -1.29
SAMM50-205ENST00000493621 DAND5Q8N907 189 aa6.97□□□□□ -1.29
SAMM50-205ENST00000493621 NAA38Q9BRA0 125 aaKnown RBP6.97□□□□□ -1.29
SAMM50-205ENST00000493621 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
SAMM50-205ENST00000493621 KRTAP4-1Q9BYQ7 146 aa6.97□□□□□ -1.29
SAMM50-205ENST00000493621 TRAV12-1A0A0B4J245 112 aa6.96□□□□□ -1.3
SAMM50-205ENST00000493621 LCE2DQ5TA82 110 aaPredicted RBP6.96□□□□□ -1.3
SAMM50-205ENST00000493621 TEN1Q86WV5 123 aa6.96□□□□□ -1.3
SAMM50-205ENST00000493621 Q8NBF4 154 aa6.96□□□□□ -1.3
SAMM50-205ENST00000493621 HIST1H4GQ99525 98 aa6.96□□□□□ -1.3
SAMM50-205ENST00000493621 SPANXCQ9NY87 97 aa6.96□□□□□ -1.3
SAMM50-205ENST00000493621 ZNF706Q9Y5V0 76 aaPredicted RBP6.96□□□□□ -1.3
SAMM50-205ENST00000493621 K7ERJ3 54 aa6.93□□□□□ -1.3
SAMM50-205ENST00000493621 LINC00158P58513 81 aa6.93□□□□□ -1.3
SAMM50-205ENST00000493621 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
SAMM50-205ENST00000493621 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
SAMM50-205ENST00000493621 MYMXA0A1B0GTQ4 84 aa6.92□□□□□ -1.3
SAMM50-205ENST00000493621 SPINK1P00995 79 aa6.92□□□□□ -1.3
SAMM50-205ENST00000493621 TMEM170BQ5T4T1 132 aa6.91□□□□□ -1.3
SAMM50-205ENST00000493621 SFTA2Q6UW10 78 aa6.91□□□□□ -1.3
SAMM50-205ENST00000493621 SMCR5Q8TEV8 140 aa6.91□□□□□ -1.3
SAMM50-205ENST00000493621 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
SAMM50-205ENST00000493621 C11orf86A6NJI1 115 aa6.9□□□□□ -1.3
SAMM50-205ENST00000493621 PRYO14603 147 aa6.9□□□□□ -1.3
SAMM50-205ENST00000493621 MT-ATP8P03928 68 aa6.9□□□□□ -1.3
SAMM50-205ENST00000493621 FSIP2Q5CZC0 6907 aa6.9□□□□□ -1.31
SAMM50-205ENST00000493621 NCR3O14931 201 aa6.89□□□□□ -1.31
SAMM50-205ENST00000493621 SNCGO76070 127 aa6.89□□□□□ -1.31
SAMM50-205ENST00000493621 SCGB1C2P0DMR2 95 aa6.89□□□□□ -1.31
SAMM50-205ENST00000493621 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
SAMM50-205ENST00000493621 ETDCA0A1B0GVM5 59 aa6.88□□□□□ -1.31
SAMM50-205ENST00000493621 IFITM1P13164 125 aa6.88□□□□□ -1.31
SAMM50-205ENST00000493621 HERVK_113P61574 105 aa6.88□□□□□ -1.31
SAMM50-205ENST00000493621 IGLV9-49A0A0B4J1Y8 123 aa6.87□□□□□ -1.31
SAMM50-205ENST00000493621 SPRR1AP35321 89 aa6.87□□□□□ -1.31
SAMM50-205ENST00000493621 NDUFV3P56181 108 aaKnown RBP6.87□□□□□ -1.31
SAMM50-205ENST00000493621 MOBPQ13875 183 aa6.87□□□□□ -1.31
SAMM50-205ENST00000493621 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
SAMM50-205ENST00000493621 GAGE2AQ6NT46 116 aa6.87□□□□□ -1.31
SAMM50-205ENST00000493621 Q8N377 158 aa6.87□□□□□ -1.31
SAMM50-205ENST00000493621 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
SAMM50-205ENST00000493621 PSMB2P49721 201 aa6.86□□□□□ -1.31
SAMM50-205ENST00000493621 SMCPP49901 116 aaPredicted RBP6.86□□□□□ -1.31
SAMM50-205ENST00000493621 KCNQ1DNQ9H478 68 aa6.86□□□□□ -1.31
SAMM50-205ENST00000493621 SS18L2Q9UHA2 77 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms