RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 XAGE1AQ9HD64 81 aa6.57□□□□□ -1.36
PRPF3-206ENST00000493553 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
PRPF3-206ENST00000493553 A0A087WYN8 130 aa6.56□□□□□ -1.36
PRPF3-206ENST00000493553 hADV29S1A0JD25 119 aa6.56□□□□□ -1.36
PRPF3-206ENST00000493553 PSCAO43653 123 aa6.56□□□□□ -1.36
PRPF3-206ENST00000493553 PRR3P79522 188 aaKnown RBP6.56□□□□□ -1.36
PRPF3-206ENST00000493553 LINC00575Q6W349 94 aa6.56□□□□□ -1.36
PRPF3-206ENST00000493553 TRBV10-3A0A0K0K1G6 114 aa6.55□□□□□ -1.36
PRPF3-206ENST00000493553 ZNF73O43830 326 aaPredicted RBP6.55□□□□□ -1.36
PRPF3-206ENST00000493553 COX7BP24311 80 aa6.55□□□□□ -1.36
PRPF3-206ENST00000493553 GAGE2EQ4V326 116 aa6.55□□□□□ -1.36
PRPF3-206ENST00000493553 GAGE2DQ9UEU5 116 aa6.55□□□□□ -1.36
PRPF3-206ENST00000493553 CMYA5Q8N3K9 4069 aa6.55□□□□□ -1.36
PRPF3-206ENST00000493553 PDE6GP18545 87 aa6.54□□□□□ -1.36
PRPF3-206ENST00000493553 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
PRPF3-206ENST00000493553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.54□□□□□ -1.36
PRPF3-206ENST00000493553 Q6ZRP5 223 aa6.54□□□□□ -1.36
PRPF3-206ENST00000493553 OBSCN-AS1Q96MR7 158 aa6.53□□□□□ -1.36
PRPF3-206ENST00000493553 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
PRPF3-206ENST00000493553 KCNQ1DNQ9H478 68 aa6.52□□□□□ -1.37
PRPF3-206ENST00000493553 NBDYA0A0U1RRE5 68 aa6.51□□□□□ -1.37
PRPF3-206ENST00000493553 PRYO14603 147 aa6.51□□□□□ -1.37
PRPF3-206ENST00000493553 Q8NDZ9 215 aa6.51□□□□□ -1.37
PRPF3-206ENST00000493553 PCP4P48539 62 aa6.5□□□□□ -1.37
PRPF3-206ENST00000493553 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
PRPF3-206ENST00000493553 DHRS4-AS1Q9P1J3 65 aa6.5□□□□□ -1.37
PRPF3-206ENST00000493553 LINC00474Q9P2X8 69 aa6.5□□□□□ -1.37
PRPF3-206ENST00000493553 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
PRPF3-206ENST00000493553 C16orf90A8MZG2 172 aa6.48□□□□□ -1.37
PRPF3-206ENST00000493553 Q6Q795 121 aa6.48□□□□□ -1.37
PRPF3-206ENST00000493553 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
PRPF3-206ENST00000493553 RBM3P98179 157 aaKnown RBP6.47□□□□□ -1.37
PRPF3-206ENST00000493553 GAGE2BQ13066 116 aa6.47□□□□□ -1.37
PRPF3-206ENST00000493553 GAGE2AQ6NT46 116 aa6.47□□□□□ -1.37
PRPF3-206ENST00000493553 C7orf33Q8WU49 177 aa6.47□□□□□ -1.37
PRPF3-206ENST00000493553 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
PRPF3-206ENST00000493553 ETDCA0A1B0GVM5 59 aa6.46□□□□□ -1.38
PRPF3-206ENST00000493553 CCKP06307 115 aa6.46□□□□□ -1.38
PRPF3-206ENST00000493553 XGP55808 180 aa6.46□□□□□ -1.38
PRPF3-206ENST00000493553 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.38
PRPF3-206ENST00000493553 LAMTOR3Q9UHA4 124 aa6.46□□□□□ -1.38
PRPF3-206ENST00000493553 IGLV1-50A0A075B6I6 118 aa6.45□□□□□ -1.38
PRPF3-206ENST00000493553 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
PRPF3-206ENST00000493553 CASC10Q5T4H9 136 aa6.45□□□□□ -1.38
PRPF3-206ENST00000493553 Q6ZQY7 126 aa6.45□□□□□ -1.38
PRPF3-206ENST00000493553 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
PRPF3-206ENST00000493553 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
PRPF3-206ENST00000493553 HUWE1Q7Z6Z7 4374 aaKnown RBP6.44□□□□□ -1.38
PRPF3-206ENST00000493553 SDIM1Q6ZPB5 146 aa6.44□□□□□ -1.38
PRPF3-206ENST00000493553 KRTAP1-5Q9BYS1 174 aa6.44□□□□□ -1.38
PRPF3-206ENST00000493553 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
PRPF3-206ENST00000493553 MT-ATP8P03928 68 aa6.43□□□□□ -1.38
PRPF3-206ENST00000493553 SPRR1AP35321 89 aa6.43□□□□□ -1.38
PRPF3-206ENST00000493553 SERTAD4-AS1Q5TG53 156 aa6.43□□□□□ -1.38
PRPF3-206ENST00000493553 ATP5EP2Q5VTU8 51 aa6.43□□□□□ -1.38
PRPF3-206ENST00000493553 C9orf163Q8N9P6 203 aa6.43□□□□□ -1.38
PRPF3-206ENST00000493553 TRBV7-7A0A0K0K1E9 115 aa6.42□□□□□ -1.38
PRPF3-206ENST00000493553 Q6ZRX8 168 aa6.42□□□□□ -1.38
PRPF3-206ENST00000493553 A0A1B0GW54 56 aa6.41□□□□□ -1.38
PRPF3-206ENST00000493553 LRCOL1A6NCL2 159 aa6.4□□□□□ -1.38
PRPF3-206ENST00000493553 NDUFV3P56181 108 aaKnown RBP6.4□□□□□ -1.38
PRPF3-206ENST00000493553 REG3GQ6UW15 175 aa6.4□□□□□ -1.38
PRPF3-206ENST00000493553 FAM19A5Q7Z5A7 132 aaPredicted RBP6.4□□□□□ -1.38
PRPF3-206ENST00000493553 UBL5Q9BZL1 73 aa6.4□□□□□ -1.38
PRPF3-206ENST00000493553 A0A096LNI7 61 aa6.38□□□□□ -1.39
PRPF3-206ENST00000493553 A0A1B0GV72 72 aa6.38□□□□□ -1.39
PRPF3-206ENST00000493553 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
PRPF3-206ENST00000493553 Q6JHZ5 121 aa6.38□□□□□ -1.39
PRPF3-206ENST00000493553 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
PRPF3-206ENST00000493553 DNAH9Q9NYC9 4486 aa6.38□□□□□ -1.39
PRPF3-206ENST00000493553 RPL37AP8A6NKH3 93 aa6.37□□□□□ -1.39
PRPF3-206ENST00000493553 H0Y9J4 135 aa6.37□□□□□ -1.39
PRPF3-206ENST00000493553 Q6ZQT0 140 aa6.37□□□□□ -1.39
PRPF3-206ENST00000493553 Q6ZR54 194 aa6.37□□□□□ -1.39
PRPF3-206ENST00000493553 TRBV7-4A0A0J9YYF1 115 aa6.36□□□□□ -1.39
PRPF3-206ENST00000493553 FAM168BA1KXE4 195 aa6.36□□□□□ -1.39
PRPF3-206ENST00000493553 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
PRPF3-206ENST00000493553 LCE1AQ5T7P2 110 aa6.36□□□□□ -1.39
PRPF3-206ENST00000493553 IGLV5-48A0A075B6I7 105 aa6.35□□□□□ -1.39
PRPF3-206ENST00000493553 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.35□□□□□ -1.39
PRPF3-206ENST00000493553 IGKV2-24A0A0C4DH68 120 aa6.35□□□□□ -1.39
PRPF3-206ENST00000493553 UBE2BP63146 152 aa6.35□□□□□ -1.39
PRPF3-206ENST00000493553 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
PRPF3-206ENST00000493553 LINC00846Q9NV44 126 aa6.35□□□□□ -1.39
PRPF3-206ENST00000493553 A0A087WTM6 91 aa6.34□□□□□ -1.39
PRPF3-206ENST00000493553 C3orf84H3BNL1 204 aa6.34□□□□□ -1.39
PRPF3-206ENST00000493553 COL7A1Q02388 2944 aa6.33□□□□□ -1.4
PRPF3-206ENST00000493553 F8WEM9 126 aa6.33□□□□□ -1.4
PRPF3-206ENST00000493553 FUSP35637 526 aaKnown RBP eCLIP6.33□□□□□ -1.4
PRPF3-206ENST00000493553 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
PRPF3-206ENST00000493553 KRTAP29-1A8MX34 341 aaPredicted RBP6.32□□□□□ -1.4
PRPF3-206ENST00000493553 SMCR5Q8TEV8 140 aa6.32□□□□□ -1.4
PRPF3-206ENST00000493553 DPH3Q96FX2 82 aa6.32□□□□□ -1.4
PRPF3-206ENST00000493553 ANAPC13Q9BS18 74 aa6.32□□□□□ -1.4
PRPF3-206ENST00000493553 DYNC2H1Q8NCM8 4307 aaKnown RBP6.32□□□□□ -1.4
PRPF3-206ENST00000493553 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
PRPF3-206ENST00000493553 EPM2AB3EWF7 344 aa6.31□□□□□ -1.4
PRPF3-206ENST00000493553 M0R2N4 97 aa6.31□□□□□ -1.4
PRPF3-206ENST00000493553 FAM19A1Q7Z5A9 133 aa6.31□□□□□ -1.4
PRPF3-206ENST00000493553 Q8N377 158 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms