RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 NPC2P61916 151 aa12.32□□□□□ -0.44
HMG20B-214ENST00000493191 NDUFA5Q16718 116 aa12.32□□□□□ -0.44
HMG20B-214ENST00000493191 EIF4EBP3O60516 100 aaPredicted RBP12.31□□□□□ -0.44
HMG20B-214ENST00000493191 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
HMG20B-214ENST00000493191 LGALS3P17931 250 aaKnown RBP12.31□□□□□ -0.44
HMG20B-214ENST00000493191 NMUP48645 174 aa12.31□□□□□ -0.44
HMG20B-214ENST00000493191 SOSTDC1Q6X4U4 206 aa12.31□□□□□ -0.44
HMG20B-214ENST00000493191 PCOTHQ58A44 107 aa12.3□□□□□ -0.44
HMG20B-214ENST00000493191 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
HMG20B-214ENST00000493191 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
HMG20B-214ENST00000493191 HERVK_113P61574 105 aa12.29□□□□□ -0.44
HMG20B-214ENST00000493191 MT1HP80294 61 aa12.28□□□□□ -0.44
HMG20B-214ENST00000493191 IGLV8-61A0A075B6I0 122 aa12.27□□□□□ -0.45
HMG20B-214ENST00000493191 C9orf92A6NGG3 77 aa12.27□□□□□ -0.45
HMG20B-214ENST00000493191 DPM2O94777 84 aa12.27□□□□□ -0.45
HMG20B-214ENST00000493191 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
HMG20B-214ENST00000493191 C5orf52A6NGY3 159 aa12.25□□□□□ -0.45
HMG20B-214ENST00000493191 SERF1AO75920 110 aa12.25□□□□□ -0.45
HMG20B-214ENST00000493191 HINT1P49773 126 aaPredicted RBP12.25□□□□□ -0.45
HMG20B-214ENST00000493191 LINC00310P59036 64 aa12.25□□□□□ -0.45
HMG20B-214ENST00000493191 LIMD2Q9BT23 127 aa12.25□□□□□ -0.45
HMG20B-214ENST00000493191 A0A0J9YXY3 114 aa12.24□□□□□ -0.45
HMG20B-214ENST00000493191 IGKCP01834 107 aa12.24□□□□□ -0.45
HMG20B-214ENST00000493191 FABP4P15090 132 aa12.24□□□□□ -0.45
HMG20B-214ENST00000493191 TRGC2P03986 189 aa12.22□□□□□ -0.45
HMG20B-214ENST00000493191 HSPB8Q9UJY1 196 aa12.22□□□□□ -0.45
HMG20B-214ENST00000493191 SPRR1BP22528 89 aa12.21□□□□□ -0.45
HMG20B-214ENST00000493191 SLC25A34Q6PIV7 304 aa12.2□□□□□ -0.46
HMG20B-214ENST00000493191 OR13C6PQ8NH95 151 aa12.19□□□□□ -0.46
HMG20B-214ENST00000493191 CBY1Q9Y3M2 126 aa12.19□□□□□ -0.46
HMG20B-214ENST00000493191 CFC1BP0CG36 223 aa12.18□□□□□ -0.46
HMG20B-214ENST00000493191 DHRS4-AS1Q9P1J3 65 aa12.18□□□□□ -0.46
HMG20B-214ENST00000493191 LAMTOR3Q9UHA4 124 aa12.18□□□□□ -0.46
HMG20B-214ENST00000493191 E9PLD3 99 aa12.14□□□□□ -0.47
HMG20B-214ENST00000493191 LINC00308Q8TCZ7 52 aa12.14□□□□□ -0.47
HMG20B-214ENST00000493191 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
HMG20B-214ENST00000493191 H7C2G1 150 aa12.12□□□□□ -0.47
HMG20B-214ENST00000493191 LORP23490 312 aaPredicted RBP12.12□□□□□ -0.47
HMG20B-214ENST00000493191 Q1RN00 199 aa12.12□□□□□ -0.47
HMG20B-214ENST00000493191 LITAFQ99732 161 aa12.12□□□□□ -0.47
HMG20B-214ENST00000493191 KRTAP10-6P60371 365 aaPredicted RBP12.11□□□□□ -0.47
HMG20B-214ENST00000493191 DEFB105AQ8NG35 78 aa12.11□□□□□ -0.47
HMG20B-214ENST00000493191 CD164Q04900 197 aa12.1□□□□□ -0.47
HMG20B-214ENST00000493191 TAL2Q16559 108 aa12.1□□□□□ -0.47
HMG20B-214ENST00000493191 COX7BP24311 80 aa12.09□□□□□ -0.47
HMG20B-214ENST00000493191 SPANXDQ9BXN6 97 aa12.09□□□□□ -0.47
HMG20B-214ENST00000493191 ELOF1P60002 83 aaKnown RBP12.08□□□□□ -0.48
HMG20B-214ENST00000493191 PRO1933Q9H354 126 aa12.08□□□□□ -0.48
HMG20B-214ENST00000493191 C6orf99Q4VX62 202 aa12.07□□□□□ -0.48
HMG20B-214ENST00000493191 TIMM17BO60830 172 aa12.05□□□□□ -0.48
HMG20B-214ENST00000493191 TEX49A0A1B0GTD5 131 aa12.04□□□□□ -0.48
HMG20B-214ENST00000493191 M0R2T5 61 aa12.04□□□□□ -0.48
HMG20B-214ENST00000493191 C1orf195Q5TG92 126 aa12.03□□□□□ -0.48
HMG20B-214ENST00000493191 FLGP20930 4061 aaPredicted RBP12.02□□□□□ -0.49
HMG20B-214ENST00000493191 A0A0G2JQZ4 141 aa12.02□□□□□ -0.49
HMG20B-214ENST00000493191 AKR1D1P51857 326 aa12.02□□□□□ -0.49
HMG20B-214ENST00000493191 Q5XG85 94 aa12.01□□□□□ -0.49
HMG20B-214ENST00000493191 SMIM29Q86T20 159 aa12.01□□□□□ -0.49
HMG20B-214ENST00000493191 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
HMG20B-214ENST00000493191 ZNF815PA8K554 130 aa12□□□□□ -0.49
HMG20B-214ENST00000493191 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
HMG20B-214ENST00000493191 RPL37P61927 97 aaKnown RBP12□□□□□ -0.49
HMG20B-214ENST00000493191 TTTY13Q9BZ97 58 aa12□□□□□ -0.49
HMG20B-214ENST00000493191 COX6B2Q6YFQ2 88 aa11.99□□□□□ -0.49
HMG20B-214ENST00000493191 TRBV7-6A0A0J9YX20 115 aa11.95□□□□□ -0.5
HMG20B-214ENST00000493191 COLCA2A8K830 154 aa11.95□□□□□ -0.5
HMG20B-214ENST00000493191 LINC01545Q5VT33 79 aa11.94□□□□□ -0.5
HMG20B-214ENST00000493191 A0A1B0GWB2 263 aa11.93□□□□□ -0.5
HMG20B-214ENST00000493191 IGLV5-48A0A075B6I7 105 aa11.92□□□□□ -0.5
HMG20B-214ENST00000493191 PET117Q6UWS5 81 aa11.89□□□□□ -0.51
HMG20B-214ENST00000493191 A6NDN8 102 aa11.88□□□□□ -0.51
HMG20B-214ENST00000493191 TCL1BO95988 128 aa11.86□□□□□ -0.51
HMG20B-214ENST00000493191 SCGB1D4Q6XE38 83 aa11.86□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
HMG20B-214ENST00000493191 A4D1N5 150 aa11.82□□□□□ -0.52
HMG20B-214ENST00000493191 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
HMG20B-214ENST00000493191 C3orf79P0CE67 100 aa11.81□□□□□ -0.52
HMG20B-214ENST00000493191 IFITM1P13164 125 aa11.81□□□□□ -0.52
HMG20B-214ENST00000493191 MUSTN1Q8IVN3 82 aa11.8□□□□□ -0.52
HMG20B-214ENST00000493191 SLC7A5P1Q8MH63 180 aa11.79□□□□□ -0.52
HMG20B-214ENST00000493191 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
HMG20B-214ENST00000493191 Q6Q795 121 aa11.78□□□□□ -0.52
HMG20B-214ENST00000493191 SMIM11BQ8TCY0 68 aa11.78□□□□□ -0.52
HMG20B-214ENST00000493191 ANKRD39Q53RE8 183 aa11.77□□□□□ -0.53
HMG20B-214ENST00000493191 F8WEM9 126 aa11.76□□□□□ -0.53
HMG20B-214ENST00000493191 KRTDAPP60985 99 aa11.76□□□□□ -0.53
HMG20B-214ENST00000493191 PCP2Q8IVA1 136 aa11.76□□□□□ -0.53
HMG20B-214ENST00000493191 Q6ZVH6 145 aa11.75□□□□□ -0.53
HMG20B-214ENST00000493191 TRAV13-2A0A0B4J235 113 aa11.74□□□□□ -0.53
HMG20B-214ENST00000493191 ATP11AUNQ6ZP68 121 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms