RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 LEPROTO15243 131 aa6.63□□□□□ -1.35
GPNMB-214ENST00000492858 COX7B2Q8TF08 81 aa6.63□□□□□ -1.35
GPNMB-214ENST00000492858 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
GPNMB-214ENST00000492858 IGLV8-61A0A075B6I0 122 aa6.62□□□□□ -1.35
GPNMB-214ENST00000492858 TSPEAR-AS2P59090 65 aa6.62□□□□□ -1.35
GPNMB-214ENST00000492858 Q8N377 158 aa6.62□□□□□ -1.35
GPNMB-214ENST00000492858 LOC105371267A0A1B0GV96 52 aa6.61□□□□□ -1.35
GPNMB-214ENST00000492858 PCOTHQ58A44 107 aa6.61□□□□□ -1.35
GPNMB-214ENST00000492858 PYY3Q5JQD4 70 aa6.61□□□□□ -1.35
GPNMB-214ENST00000492858 SFTA2Q6UW10 78 aa6.61□□□□□ -1.35
GPNMB-214ENST00000492858 VPREB1P12018 145 aa6.6□□□□□ -1.35
GPNMB-214ENST00000492858 ANKRD39Q53RE8 183 aa6.6□□□□□ -1.35
GPNMB-214ENST00000492858 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
GPNMB-214ENST00000492858 J3QQQ9 107 aa6.58□□□□□ -1.36
GPNMB-214ENST00000492858 NMUP48645 174 aa6.58□□□□□ -1.36
GPNMB-214ENST00000492858 HERVK_113P61574 105 aa6.58□□□□□ -1.36
GPNMB-214ENST00000492858 SLC25A20O43772 301 aa6.57□□□□□ -1.36
GPNMB-214ENST00000492858 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
GPNMB-214ENST00000492858 RPS29P62273 56 aaKnown RBP6.57□□□□□ -1.36
GPNMB-214ENST00000492858 ATOH7Q8N100 152 aa6.57□□□□□ -1.36
GPNMB-214ENST00000492858 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
GPNMB-214ENST00000492858 PFN2P35080 140 aa6.56□□□□□ -1.36
GPNMB-214ENST00000492858 HERV-K104P63124 156 aa6.56□□□□□ -1.36
GPNMB-214ENST00000492858 COX17Q14061 63 aa6.56□□□□□ -1.36
GPNMB-214ENST00000492858 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
GPNMB-214ENST00000492858 MYMXA0A1B0GTQ4 84 aa6.55□□□□□ -1.36
GPNMB-214ENST00000492858 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
GPNMB-214ENST00000492858 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
GPNMB-214ENST00000492858 Q8NDZ9 215 aa6.55□□□□□ -1.36
GPNMB-214ENST00000492858 SVIPQ8NHG7 77 aa6.55□□□□□ -1.36
GPNMB-214ENST00000492858 SND1-IT1Q9HBX3 110 aa6.55□□□□□ -1.36
GPNMB-214ENST00000492858 DLEU1O43261 78 aa6.54□□□□□ -1.36
GPNMB-214ENST00000492858 MOBPQ13875 183 aa6.54□□□□□ -1.36
GPNMB-214ENST00000492858 LITAFQ99732 161 aa6.54□□□□□ -1.36
GPNMB-214ENST00000492858 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
GPNMB-214ENST00000492858 TIMM17BO60830 172 aa6.53□□□□□ -1.36
GPNMB-214ENST00000492858 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
GPNMB-214ENST00000492858 ERG28Q9UKR5 140 aa6.53□□□□□ -1.36
GPNMB-214ENST00000492858 IGLV9-49A0A0B4J1Y8 123 aa6.52□□□□□ -1.37
GPNMB-214ENST00000492858 LINC00587B1AMM8 73 aa6.52□□□□□ -1.37
GPNMB-214ENST00000492858 COX8AP10176 69 aa6.52□□□□□ -1.37
GPNMB-214ENST00000492858 LGALS3P17931 250 aaKnown RBP6.52□□□□□ -1.37
GPNMB-214ENST00000492858 PCP2Q8IVA1 136 aa6.52□□□□□ -1.37
GPNMB-214ENST00000492858 BOD1L2Q8IYS8 172 aa6.52□□□□□ -1.37
GPNMB-214ENST00000492858 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
GPNMB-214ENST00000492858 HSBP1L1C9JCN9 74 aa6.51□□□□□ -1.37
GPNMB-214ENST00000492858 SMIM6P0DI80 62 aa6.51□□□□□ -1.37
GPNMB-214ENST00000492858 LINC00483Q53H64 154 aa6.51□□□□□ -1.37
GPNMB-214ENST00000492858 SMCR5Q8TEV8 140 aa6.51□□□□□ -1.37
GPNMB-214ENST00000492858 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
GPNMB-214ENST00000492858 GAGE2AQ6NT46 116 aa6.5□□□□□ -1.37
GPNMB-214ENST00000492858 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
GPNMB-214ENST00000492858 C9orf92A6NGG3 77 aa6.49□□□□□ -1.37
GPNMB-214ENST00000492858 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
GPNMB-214ENST00000492858 SPATA45Q537H7 98 aa6.49□□□□□ -1.37
GPNMB-214ENST00000492858 ADAMTSL4-AS1Q5T5F5 129 aa6.49□□□□□ -1.37
GPNMB-214ENST00000492858 VAMP8Q9BV40 100 aa6.49□□□□□ -1.37
GPNMB-214ENST00000492858 LCE2BO14633 110 aa6.48□□□□□ -1.37
GPNMB-214ENST00000492858 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
GPNMB-214ENST00000492858 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
GPNMB-214ENST00000492858 PAM16Q9Y3D7 125 aa6.48□□□□□ -1.37
GPNMB-214ENST00000492858 SPANXB1Q9NS25 103 aaPredicted RBP6.47□□□□□ -1.37
GPNMB-214ENST00000492858 HIGD1BQ9P298 99 aa6.47□□□□□ -1.37
GPNMB-214ENST00000492858 PRYO14603 147 aa6.46□□□□□ -1.38
GPNMB-214ENST00000492858 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.38
GPNMB-214ENST00000492858 Q6ZVH6 145 aa6.46□□□□□ -1.38
GPNMB-214ENST00000492858 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
GPNMB-214ENST00000492858 ETDCA0A1B0GVM5 59 aa6.45□□□□□ -1.38
GPNMB-214ENST00000492858 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
GPNMB-214ENST00000492858 MEIG1Q5JSS6 88 aa6.45□□□□□ -1.38
GPNMB-214ENST00000492858 C2orf91Q6ZV80 131 aa6.45□□□□□ -1.38
GPNMB-214ENST00000492858 LINC00158P58513 81 aa6.44□□□□□ -1.38
GPNMB-214ENST00000492858 LINC00518Q8N0U6 118 aa6.44□□□□□ -1.38
GPNMB-214ENST00000492858 C14orf144Q96I85 54 aa6.44□□□□□ -1.38
GPNMB-214ENST00000492858 NDUFC2O95298 119 aa6.43□□□□□ -1.38
GPNMB-214ENST00000492858 IFITM1P13164 125 aa6.43□□□□□ -1.38
GPNMB-214ENST00000492858 SPRR1AP35321 89 aa6.43□□□□□ -1.38
GPNMB-214ENST00000492858 SLC25A34Q6PIV7 304 aa6.43□□□□□ -1.38
GPNMB-214ENST00000492858 LINC00308Q8TCZ7 52 aa6.43□□□□□ -1.38
GPNMB-214ENST00000492858 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
GPNMB-214ENST00000492858 S100A12P80511 92 aa6.42□□□□□ -1.38
GPNMB-214ENST00000492858 C9orf153Q5TBE3 101 aa6.42□□□□□ -1.38
GPNMB-214ENST00000492858 A0A0U1RRA0 63 aa6.41□□□□□ -1.38
GPNMB-214ENST00000492858 CFC1P0CG37 223 aa6.41□□□□□ -1.38
GPNMB-214ENST00000492858 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
GPNMB-214ENST00000492858 KCNQ1DNQ9H478 68 aa6.41□□□□□ -1.38
GPNMB-214ENST00000492858 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
GPNMB-214ENST00000492858 IGLV6-57P01721 117 aa6.4□□□□□ -1.38
GPNMB-214ENST00000492858 TAL2Q16559 108 aa6.4□□□□□ -1.38
GPNMB-214ENST00000492858 C12orf57Q99622 126 aa6.4□□□□□ -1.38
GPNMB-214ENST00000492858 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
GPNMB-214ENST00000492858 NCR3O14931 201 aa6.39□□□□□ -1.39
GPNMB-214ENST00000492858 MUSTN1Q8IVN3 82 aa6.39□□□□□ -1.39
GPNMB-214ENST00000492858 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
GPNMB-214ENST00000492858 B5MCH6 92 aa6.38□□□□□ -1.39
GPNMB-214ENST00000492858 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
GPNMB-214ENST00000492858 COPS9Q8WXC6 57 aa6.38□□□□□ -1.39
GPNMB-214ENST00000492858 LIMD2Q9BT23 127 aa6.38□□□□□ -1.39
GPNMB-214ENST00000492858 TRBV10-3A0A0K0K1G6 114 aa6.36□□□□□ -1.39
GPNMB-214ENST00000492858 Q9BRP9 147 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms