RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MEIG1Q5JSS6 88 aa4.74□□□□□ -1.65
SMARCB1-207ENST00000491967 PET117Q6UWS5 81 aa4.74□□□□□ -1.65
SMARCB1-207ENST00000491967 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
SMARCB1-207ENST00000491967 J3QQQ9 107 aa4.73□□□□□ -1.65
SMARCB1-207ENST00000491967 NDUFC2O95298 119 aa4.73□□□□□ -1.65
SMARCB1-207ENST00000491967 IGLV6-57P01721 117 aa4.73□□□□□ -1.65
SMARCB1-207ENST00000491967 NMUP48645 174 aa4.73□□□□□ -1.65
SMARCB1-207ENST00000491967 RPS29P62273 56 aaKnown RBP4.73□□□□□ -1.65
SMARCB1-207ENST00000491967 Q8NBF4 154 aa4.73□□□□□ -1.65
SMARCB1-207ENST00000491967 Q9BRP9 147 aa4.73□□□□□ -1.65
SMARCB1-207ENST00000491967 ETDCA0A1B0GVM5 59 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 C20orf202A1L168 122 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 ERC2-IT1O76042 136 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 DPM2O94777 84 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 IGKCP01834 107 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 LINC01545Q5VT33 79 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 Q6ZRX8 168 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 SSBP3-AS1Q7Z2R9 100 aa4.72□□□□□ -1.65
SMARCB1-207ENST00000491967 DDTP30046 118 aa4.71□□□□□ -1.66
SMARCB1-207ENST00000491967 ASB16-AS1Q495Z4 193 aa4.71□□□□□ -1.66
SMARCB1-207ENST00000491967 C4orf48Q5BLP8 95 aa4.71□□□□□ -1.66
SMARCB1-207ENST00000491967 ATOH7Q8N100 152 aa4.71□□□□□ -1.66
SMARCB1-207ENST00000491967 DAND5Q8N907 189 aa4.71□□□□□ -1.66
SMARCB1-207ENST00000491967 SPANXB1Q9NS25 103 aaPredicted RBP4.71□□□□□ -1.66
SMARCB1-207ENST00000491967 EIF4EBP3O60516 100 aaPredicted RBP4.7□□□□□ -1.66
SMARCB1-207ENST00000491967 SCGB1D1O95968 90 aa4.7□□□□□ -1.66
SMARCB1-207ENST00000491967 ADAMTSL4-AS1Q5T5F5 129 aa4.7□□□□□ -1.66
SMARCB1-207ENST00000491967 SOSTDC1Q6X4U4 206 aa4.7□□□□□ -1.66
SMARCB1-207ENST00000491967 Q8N377 158 aa4.7□□□□□ -1.66
SMARCB1-207ENST00000491967 CRCT1Q9UGL9 99 aa4.7□□□□□ -1.66
SMARCB1-207ENST00000491967 E9PLD3 99 aa4.69□□□□□ -1.66
SMARCB1-207ENST00000491967 HERVK_113P61574 105 aa4.69□□□□□ -1.66
SMARCB1-207ENST00000491967 S100A12P80511 92 aa4.69□□□□□ -1.66
SMARCB1-207ENST00000491967 GAGE2AQ6NT46 116 aa4.69□□□□□ -1.66
SMARCB1-207ENST00000491967 A0A0J9YXY3 114 aa4.68□□□□□ -1.66
SMARCB1-207ENST00000491967 LGALS3P17931 250 aaKnown RBP4.68□□□□□ -1.66
SMARCB1-207ENST00000491967 AKR1D1P51857 326 aa4.68□□□□□ -1.66
SMARCB1-207ENST00000491967 LITAFQ99732 161 aa4.68□□□□□ -1.66
SMARCB1-207ENST00000491967 SLC25A20O43772 301 aa4.67□□□□□ -1.66
SMARCB1-207ENST00000491967 ZNF73O43830 326 aaPredicted RBP4.67□□□□□ -1.66
SMARCB1-207ENST00000491967 MOBPQ13875 183 aa4.67□□□□□ -1.66
SMARCB1-207ENST00000491967 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
SMARCB1-207ENST00000491967 FSIP2Q5CZC0 6907 aa4.66□□□□□ -1.66
SMARCB1-207ENST00000491967 TRAV23DV6A0A075B6W5 121 aa4.66□□□□□ -1.66
SMARCB1-207ENST00000491967 TIMM17BO60830 172 aa4.66□□□□□ -1.66
SMARCB1-207ENST00000491967 SPRR1BP22528 89 aa4.66□□□□□ -1.66
SMARCB1-207ENST00000491967 JOSD1Q15040 202 aaPredicted RBP4.66□□□□□ -1.66
SMARCB1-207ENST00000491967 IGLV9-49A0A0B4J1Y8 123 aa4.65□□□□□ -1.67
SMARCB1-207ENST00000491967 HSBP1L1C9JCN9 74 aa4.65□□□□□ -1.67
SMARCB1-207ENST00000491967 ANKRD39Q53RE8 183 aa4.65□□□□□ -1.67
SMARCB1-207ENST00000491967 S100A7L2Q5SY68 101 aa4.65□□□□□ -1.67
SMARCB1-207ENST00000491967 XP32Q5T750 250 aa4.65□□□□□ -1.67
SMARCB1-207ENST00000491967 MIEN1Q9BRT3 115 aa4.65□□□□□ -1.67
SMARCB1-207ENST00000491967 TTTY13Q9BZ97 58 aa4.65□□□□□ -1.67
SMARCB1-207ENST00000491967 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
SMARCB1-207ENST00000491967 PYY3Q5JQD4 70 aa4.64□□□□□ -1.67
SMARCB1-207ENST00000491967 LINC00308Q8TCZ7 52 aa4.64□□□□□ -1.67
SMARCB1-207ENST00000491967 SPANXCQ9NY87 97 aa4.64□□□□□ -1.67
SMARCB1-207ENST00000491967 CBY1Q9Y3M2 126 aa4.64□□□□□ -1.67
SMARCB1-207ENST00000491967 ST20-AS1Q8NBB2 130 aa4.63□□□□□ -1.67
SMARCB1-207ENST00000491967 LOC105371267A0A1B0GV96 52 aa4.62□□□□□ -1.67
SMARCB1-207ENST00000491967 ZNF815PA8K554 130 aa4.62□□□□□ -1.67
SMARCB1-207ENST00000491967 LCE2CQ5TA81 110 aa4.62□□□□□ -1.67
SMARCB1-207ENST00000491967 PCP2Q8IVA1 136 aa4.62□□□□□ -1.67
SMARCB1-207ENST00000491967 PAM16Q9Y3D7 125 aa4.62□□□□□ -1.67
SMARCB1-207ENST00000491967 NPC2P61916 151 aa4.61□□□□□ -1.67
SMARCB1-207ENST00000491967 SPATA45Q537H7 98 aa4.61□□□□□ -1.67
SMARCB1-207ENST00000491967 VAMP8Q9BV40 100 aa4.61□□□□□ -1.67
SMARCB1-207ENST00000491967 SPANXDQ9BXN6 97 aa4.61□□□□□ -1.67
SMARCB1-207ENST00000491967 DHRS4-AS1Q9P1J3 65 aa4.61□□□□□ -1.67
SMARCB1-207ENST00000491967 TRBV7-6A0A0J9YX20 115 aa4.6□□□□□ -1.67
SMARCB1-207ENST00000491967 HINT1P49773 126 aaPredicted RBP4.6□□□□□ -1.67
SMARCB1-207ENST00000491967 ELOF1P60002 83 aaKnown RBP4.6□□□□□ -1.67
SMARCB1-207ENST00000491967 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
SMARCB1-207ENST00000491967 C14orf144Q96I85 54 aa4.6□□□□□ -1.67
SMARCB1-207ENST00000491967 CD164Q04900 197 aa4.59□□□□□ -1.67
SMARCB1-207ENST00000491967 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
SMARCB1-207ENST00000491967 C9orf153Q5TBE3 101 aa4.59□□□□□ -1.67
SMARCB1-207ENST00000491967 Q5XG85 94 aa4.59□□□□□ -1.67
SMARCB1-207ENST00000491967 SLC25A34Q6PIV7 304 aa4.59□□□□□ -1.67
SMARCB1-207ENST00000491967 SCGB1D4Q6XE38 83 aa4.59□□□□□ -1.67
SMARCB1-207ENST00000491967 COX8AP10176 69 aa4.58□□□□□ -1.68
SMARCB1-207ENST00000491967 SMCPP49901 116 aaPredicted RBP4.58□□□□□ -1.68
SMARCB1-207ENST00000491967 IGLV5-48A0A075B6I7 105 aa4.57□□□□□ -1.68
SMARCB1-207ENST00000491967 COX7BP24311 80 aa4.57□□□□□ -1.68
SMARCB1-207ENST00000491967 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
SMARCB1-207ENST00000491967 C6orf99Q4VX62 202 aa4.57□□□□□ -1.68
SMARCB1-207ENST00000491967 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
SMARCB1-207ENST00000491967 OR13C6PQ8NH95 151 aa4.57□□□□□ -1.68
SMARCB1-207ENST00000491967 LAMTOR3Q9UHA4 124 aa4.57□□□□□ -1.68
SMARCB1-207ENST00000491967 IFITM1P13164 125 aa4.56□□□□□ -1.68
SMARCB1-207ENST00000491967 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
SMARCB1-207ENST00000491967 TEX49A0A1B0GTD5 131 aa4.55□□□□□ -1.68
SMARCB1-207ENST00000491967 SMIM6P0DI80 62 aa4.55□□□□□ -1.68
SMARCB1-207ENST00000491967 Q6ZVH6 145 aa4.55□□□□□ -1.68
SMARCB1-207ENST00000491967 PRO1933Q9H354 126 aa4.55□□□□□ -1.68
SMARCB1-207ENST00000491967 A0A1B0GWB2 263 aa4.54□□□□□ -1.68
SMARCB1-207ENST00000491967 DLEU1O43261 78 aa4.54□□□□□ -1.68
SMARCB1-207ENST00000491967 TAL2Q16559 108 aa4.53□□□□□ -1.68
SMARCB1-207ENST00000491967 MUSTN1Q8IVN3 82 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms