RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 PLNP26678 52 aa9.15□□□□□ -0.94
SRGAP3-209ENST00000490889 MIEN1Q9BRT3 115 aa9.15□□□□□ -0.94
SRGAP3-209ENST00000490889 FSIP2Q5CZC0 6907 aa9.15□□□□□ -0.95
SRGAP3-209ENST00000490889 TRGC2P03986 189 aa9.14□□□□□ -0.95
SRGAP3-209ENST00000490889 NPC2P61916 151 aa9.14□□□□□ -0.95
SRGAP3-209ENST00000490889 DPM2O94777 84 aa9.13□□□□□ -0.95
SRGAP3-209ENST00000490889 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
SRGAP3-209ENST00000490889 NMUP48645 174 aa9.13□□□□□ -0.95
SRGAP3-209ENST00000490889 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
SRGAP3-209ENST00000490889 ZNF73O43830 326 aaPredicted RBP9.12□□□□□ -0.95
SRGAP3-209ENST00000490889 HERVK_113P61574 105 aa9.12□□□□□ -0.95
SRGAP3-209ENST00000490889 JOSD1Q15040 202 aaPredicted RBP9.12□□□□□ -0.95
SRGAP3-209ENST00000490889 KRTAP19-2Q3LHN2 52 aa9.12□□□□□ -0.95
SRGAP3-209ENST00000490889 FABP4P15090 132 aa9.11□□□□□ -0.95
SRGAP3-209ENST00000490889 A0A0J9YXY3 114 aa9.1□□□□□ -0.95
SRGAP3-209ENST00000490889 IGKCP01834 107 aa9.1□□□□□ -0.95
SRGAP3-209ENST00000490889 HSPB8Q9UJY1 196 aa9.08□□□□□ -0.96
SRGAP3-209ENST00000490889 SPRR1BP22528 89 aa9.06□□□□□ -0.96
SRGAP3-209ENST00000490889 HRCT1Q6UXD1 115 aa9.06□□□□□ -0.96
SRGAP3-209ENST00000490889 C5orf52A6NGY3 159 aa9.05□□□□□ -0.96
SRGAP3-209ENST00000490889 E9PLD3 99 aa9.05□□□□□ -0.96
SRGAP3-209ENST00000490889 LITAFQ99732 161 aa9.05□□□□□ -0.96
SRGAP3-209ENST00000490889 CRCT1Q9UGL9 99 aa9.05□□□□□ -0.96
SRGAP3-209ENST00000490889 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
SRGAP3-209ENST00000490889 C9orf92A6NGG3 77 aa9.03□□□□□ -0.96
SRGAP3-209ENST00000490889 MT1HP80294 61 aa9.03□□□□□ -0.96
SRGAP3-209ENST00000490889 HINT1P49773 126 aaPredicted RBP9.02□□□□□ -0.97
SRGAP3-209ENST00000490889 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
SRGAP3-209ENST00000490889 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
SRGAP3-209ENST00000490889 OR13C6PQ8NH95 151 aa9.01□□□□□ -0.97
SRGAP3-209ENST00000490889 LIMD2Q9BT23 127 aa9.01□□□□□ -0.97
SRGAP3-209ENST00000490889 IGLV8-61A0A075B6I0 122 aa9□□□□□ -0.97
SRGAP3-209ENST00000490889 DHRS4-AS1Q9P1J3 65 aa8.99□□□□□ -0.97
SRGAP3-209ENST00000490889 CBY1Q9Y3M2 126 aa8.99□□□□□ -0.97
SRGAP3-209ENST00000490889 LAMTOR3Q9UHA4 124 aa8.98□□□□□ -0.97
SRGAP3-209ENST00000490889 COLCA2A8K830 154 aa8.97□□□□□ -0.97
SRGAP3-209ENST00000490889 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
SRGAP3-209ENST00000490889 SLC25A34Q6PIV7 304 aa8.97□□□□□ -0.97
SRGAP3-209ENST00000490889 TIMM17BO60830 172 aa8.96□□□□□ -0.98
SRGAP3-209ENST00000490889 Q1RN00 199 aa8.96□□□□□ -0.98
SRGAP3-209ENST00000490889 C6orf99Q4VX62 202 aa8.96□□□□□ -0.98
SRGAP3-209ENST00000490889 SPANXDQ9BXN6 97 aa8.96□□□□□ -0.98
SRGAP3-209ENST00000490889 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
SRGAP3-209ENST00000490889 SYS1-DBNDD2H3BUS1 97 aa8.95□□□□□ -0.98
SRGAP3-209ENST00000490889 COX7BP24311 80 aa8.95□□□□□ -0.98
SRGAP3-209ENST00000490889 H7C2G1 150 aa8.94□□□□□ -0.98
SRGAP3-209ENST00000490889 DEFB105AQ8NG35 78 aa8.94□□□□□ -0.98
SRGAP3-209ENST00000490889 ZNF815PA8K554 130 aa8.92□□□□□ -0.98
SRGAP3-209ENST00000490889 CD164Q04900 197 aa8.92□□□□□ -0.98
SRGAP3-209ENST00000490889 TAL2Q16559 108 aa8.92□□□□□ -0.98
SRGAP3-209ENST00000490889 LINC01545Q5VT33 79 aa8.92□□□□□ -0.98
SRGAP3-209ENST00000490889 SMIM29Q86T20 159 aa8.92□□□□□ -0.98
SRGAP3-209ENST00000490889 PRO1933Q9H354 126 aa8.92□□□□□ -0.98
SRGAP3-209ENST00000490889 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
SRGAP3-209ENST00000490889 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
SRGAP3-209ENST00000490889 TEX49A0A1B0GTD5 131 aa8.9□□□□□ -0.98
SRGAP3-209ENST00000490889 CFC1BP0CG36 223 aa8.9□□□□□ -0.98
SRGAP3-209ENST00000490889 C1orf195Q5TG92 126 aa8.9□□□□□ -0.98
SRGAP3-209ENST00000490889 KRTAP10-6P60371 365 aaPredicted RBP8.89□□□□□ -0.99
SRGAP3-209ENST00000490889 Q5XG85 94 aa8.89□□□□□ -0.99
SRGAP3-209ENST00000490889 LINC00518Q8N0U6 118 aa8.89□□□□□ -0.99
SRGAP3-209ENST00000490889 SLC7A5P1Q8MH63 180 aa8.88□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BKO60814 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BJP06899 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BOP23527 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BBP33778 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BDP58876 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BCP62807 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST2H2BEQ16778 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 PET117Q6UWS5 81 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BHQ93079 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BNQ99877 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 HIST1H2BMQ99879 126 aa8.87□□□□□ -0.99
SRGAP3-209ENST00000490889 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
SRGAP3-209ENST00000490889 TRBV7-6A0A0J9YX20 115 aa8.85□□□□□ -0.99
SRGAP3-209ENST00000490889 AKR1D1P51857 326 aa8.85□□□□□ -0.99
SRGAP3-209ENST00000490889 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
SRGAP3-209ENST00000490889 FLGP20930 4061 aaPredicted RBP8.85□□□□□ -0.99
SRGAP3-209ENST00000490889 A0A1B0GWB2 263 aa8.83□□□□□ -1
SRGAP3-209ENST00000490889 C3orf79P0CE67 100 aa8.83□□□□□ -1
SRGAP3-209ENST00000490889 A6NDN8 102 aa8.8□□□□□ -1
SRGAP3-209ENST00000490889 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
SRGAP3-209ENST00000490889 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
SRGAP3-209ENST00000490889 M0R2T5 61 aa8.78□□□□□ -1
SRGAP3-209ENST00000490889 MUSTN1Q8IVN3 82 aa8.78□□□□□ -1
SRGAP3-209ENST00000490889 IFITM1P13164 125 aa8.77□□□□□ -1.01
SRGAP3-209ENST00000490889 KRTDAPP60985 99 aa8.77□□□□□ -1.01
SRGAP3-209ENST00000490889 COX6B2Q6YFQ2 88 aa8.76□□□□□ -1.01
SRGAP3-209ENST00000490889 SMIM11BQ8TCY0 68 aa8.76□□□□□ -1.01
SRGAP3-209ENST00000490889 PCP2Q8IVA1 136 aa8.75□□□□□ -1.01
SRGAP3-209ENST00000490889 A4D1N5 150 aa8.74□□□□□ -1.01
SRGAP3-209ENST00000490889 ATOH7Q8N100 152 aa8.74□□□□□ -1.01
SRGAP3-209ENST00000490889 COPS9Q8WXC6 57 aa8.74□□□□□ -1.01
SRGAP3-209ENST00000490889 TCL1BO95988 128 aa8.73□□□□□ -1.01
SRGAP3-209ENST00000490889 Q6ZVH6 145 aa8.73□□□□□ -1.01
SRGAP3-209ENST00000490889 COA6Q5JTJ3 125 aaKnown RBP8.72□□□□□ -1.01
SRGAP3-209ENST00000490889 NHP2Q9NX24 153 aaKnown RBP8.71□□□□□ -1.02
SRGAP3-209ENST00000490889 TRAV13-2A0A0B4J235 113 aa8.7□□□□□ -1.02
SRGAP3-209ENST00000490889 C20orf202A1L168 122 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms