RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 HIST1H2BNQ99877 126 aa8.75□□□□□ -1.01
NUP58-213ENST00000490231 HIST1H2BMQ99879 126 aa8.75□□□□□ -1.01
NUP58-213ENST00000490231 KRTAP4-1Q9BYQ7 146 aa8.75□□□□□ -1.01
NUP58-213ENST00000490231 SPANXB1Q9NS25 103 aaPredicted RBP8.75□□□□□ -1.01
NUP58-213ENST00000490231 H0Y8G0 127 aa8.74□□□□□ -1.01
NUP58-213ENST00000490231 NDUFC2O95298 119 aa8.73□□□□□ -1.01
NUP58-213ENST00000490231 PLNP26678 52 aa8.73□□□□□ -1.01
NUP58-213ENST00000490231 J3QQQ9 107 aa8.72□□□□□ -1.01
NUP58-213ENST00000490231 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
NUP58-213ENST00000490231 IGLV6-57P01721 117 aa8.72□□□□□ -1.01
NUP58-213ENST00000490231 NMUP48645 174 aa8.72□□□□□ -1.01
NUP58-213ENST00000490231 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
NUP58-213ENST00000490231 JOSD1Q15040 202 aaPredicted RBP8.71□□□□□ -1.02
NUP58-213ENST00000490231 S100A7L2Q5SY68 101 aa8.71□□□□□ -1.02
NUP58-213ENST00000490231 XP32Q5T750 250 aa8.71□□□□□ -1.02
NUP58-213ENST00000490231 COA6Q5JTJ3 125 aaKnown RBP8.7□□□□□ -1.02
NUP58-213ENST00000490231 TRAV23DV6A0A075B6W5 121 aa8.69□□□□□ -1.02
NUP58-213ENST00000490231 HERVK_113P61574 105 aa8.69□□□□□ -1.02
NUP58-213ENST00000490231 DPM2O94777 84 aa8.68□□□□□ -1.02
NUP58-213ENST00000490231 LGALS3P17931 250 aaKnown RBP8.68□□□□□ -1.02
NUP58-213ENST00000490231 C5orf52A6NGY3 159 aa8.67□□□□□ -1.02
NUP58-213ENST00000490231 ZNF73O43830 326 aaPredicted RBP8.67□□□□□ -1.02
NUP58-213ENST00000490231 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
NUP58-213ENST00000490231 HSPB8Q9UJY1 196 aa8.67□□□□□ -1.02
NUP58-213ENST00000490231 IGKCP01834 107 aa8.66□□□□□ -1.02
NUP58-213ENST00000490231 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.02
NUP58-213ENST00000490231 ST20-AS1Q8NBB2 130 aa8.64□□□□□ -1.03
NUP58-213ENST00000490231 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
NUP58-213ENST00000490231 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
NUP58-213ENST00000490231 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
NUP58-213ENST00000490231 EIF4EBP3O60516 100 aaPredicted RBP8.63□□□□□ -1.03
NUP58-213ENST00000490231 FABP4P15090 132 aa8.63□□□□□ -1.03
NUP58-213ENST00000490231 HINT1P49773 126 aaPredicted RBP8.63□□□□□ -1.03
NUP58-213ENST00000490231 ADAMTSL4-AS1Q5T5F5 129 aa8.63□□□□□ -1.03
NUP58-213ENST00000490231 NPC2P61916 151 aa8.62□□□□□ -1.03
NUP58-213ENST00000490231 SPRR1BP22528 89 aa8.61□□□□□ -1.03
NUP58-213ENST00000490231 E9PLD3 99 aa8.6□□□□□ -1.03
NUP58-213ENST00000490231 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
NUP58-213ENST00000490231 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
NUP58-213ENST00000490231 SLC25A34Q6PIV7 304 aa8.59□□□□□ -1.03
NUP58-213ENST00000490231 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
NUP58-213ENST00000490231 DHRS4-AS1Q9P1J3 65 aa8.58□□□□□ -1.04
NUP58-213ENST00000490231 SYS1-DBNDD2H3BUS1 97 aa8.56□□□□□ -1.04
NUP58-213ENST00000490231 LINC00308Q8TCZ7 52 aa8.56□□□□□ -1.04
NUP58-213ENST00000490231 LITAFQ99732 161 aa8.56□□□□□ -1.04
NUP58-213ENST00000490231 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
NUP58-213ENST00000490231 OR13C6PQ8NH95 151 aa8.55□□□□□ -1.04
NUP58-213ENST00000490231 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
NUP58-213ENST00000490231 TIMM17BO60830 172 aa8.54□□□□□ -1.04
NUP58-213ENST00000490231 C3orf79P0CE67 100 aa8.54□□□□□ -1.04
NUP58-213ENST00000490231 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
NUP58-213ENST00000490231 HRCT1Q6UXD1 115 aa8.54□□□□□ -1.04
NUP58-213ENST00000490231 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
NUP58-213ENST00000490231 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
NUP58-213ENST00000490231 ELOF1P60002 83 aaKnown RBP8.52□□□□□ -1.05
NUP58-213ENST00000490231 PCOTHQ58A44 107 aa8.52□□□□□ -1.05
NUP58-213ENST00000490231 PET117Q6UWS5 81 aa8.52□□□□□ -1.05
NUP58-213ENST00000490231 IGLV8-61A0A075B6I0 122 aa8.51□□□□□ -1.05
NUP58-213ENST00000490231 CD164Q04900 197 aa8.51□□□□□ -1.05
NUP58-213ENST00000490231 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
NUP58-213ENST00000490231 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
NUP58-213ENST00000490231 COX7BP24311 80 aa8.5□□□□□ -1.05
NUP58-213ENST00000490231 MT1HP80294 61 aa8.5□□□□□ -1.05
NUP58-213ENST00000490231 FSIP2Q5CZC0 6907 aa8.49□□□□□ -1.05
NUP58-213ENST00000490231 LINC00518Q8N0U6 118 aa8.49□□□□□ -1.05
NUP58-213ENST00000490231 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
NUP58-213ENST00000490231 TAL2Q16559 108 aa8.48□□□□□ -1.05
NUP58-213ENST00000490231 C6orf99Q4VX62 202 aa8.48□□□□□ -1.05
NUP58-213ENST00000490231 PRO1933Q9H354 126 aa8.48□□□□□ -1.05
NUP58-213ENST00000490231 TEX49A0A1B0GTD5 131 aa8.47□□□□□ -1.05
NUP58-213ENST00000490231 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
NUP58-213ENST00000490231 CFC1BP0CG36 223 aa8.47□□□□□ -1.05
NUP58-213ENST00000490231 Q1RN00 199 aa8.47□□□□□ -1.05
NUP58-213ENST00000490231 Q5XG85 94 aa8.47□□□□□ -1.05
NUP58-213ENST00000490231 TRBV7-6A0A0J9YX20 115 aa8.46□□□□□ -1.06
NUP58-213ENST00000490231 H7C2G1 150 aa8.45□□□□□ -1.06
NUP58-213ENST00000490231 KRTDAPP60985 99 aa8.45□□□□□ -1.06
NUP58-213ENST00000490231 SNRPEP62304 92 aaKnown RBP8.45□□□□□ -1.06
NUP58-213ENST00000490231 DEFB105AQ8NG35 78 aa8.45□□□□□ -1.06
NUP58-213ENST00000490231 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
NUP58-213ENST00000490231 TTTY13Q9BZ97 58 aa8.44□□□□□ -1.06
NUP58-213ENST00000490231 AKR1D1P51857 326 aa8.43□□□□□ -1.06
NUP58-213ENST00000490231 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
NUP58-213ENST00000490231 IGLV5-48A0A075B6I7 105 aa8.41□□□□□ -1.06
NUP58-213ENST00000490231 C1orf195Q5TG92 126 aa8.41□□□□□ -1.06
NUP58-213ENST00000490231 S100A6P06703 90 aa8.4□□□□□ -1.06
NUP58-213ENST00000490231 COPS9Q8WXC6 57 aa8.4□□□□□ -1.06
NUP58-213ENST00000490231 ANKRD39Q53RE8 183 aa8.39□□□□□ -1.07
NUP58-213ENST00000490231 IFITM1P13164 125 aa8.38□□□□□ -1.07
NUP58-213ENST00000490231 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
NUP58-213ENST00000490231 S100A2P29034 98 aa8.38□□□□□ -1.07
NUP58-213ENST00000490231 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
NUP58-213ENST00000490231 SCGB1D4Q6XE38 83 aa8.38□□□□□ -1.07
NUP58-213ENST00000490231 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
NUP58-213ENST00000490231 ATOH7Q8N100 152 aa8.37□□□□□ -1.07
NUP58-213ENST00000490231 A4D1N5 150 aa8.36□□□□□ -1.07
NUP58-213ENST00000490231 A6NDN8 102 aa8.36□□□□□ -1.07
NUP58-213ENST00000490231 SMCPP49901 116 aaPredicted RBP8.36□□□□□ -1.07
NUP58-213ENST00000490231 Q6ZVH6 145 aa8.36□□□□□ -1.07
NUP58-213ENST00000490231 A0A0G2JQZ4 141 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 279 ms