RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 ZNF706Q9Y5V0 76 aaPredicted RBP12.58□□□□□ -0.4
HOXA9-205ENST00000489695 LGALS3P17931 250 aaKnown RBP12.57□□□□□ -0.4
HOXA9-205ENST00000489695 ETDCA0A1B0GVM5 59 aa12.56□□□□□ -0.4
HOXA9-205ENST00000489695 SMCR5Q8TEV8 140 aa12.55□□□□□ -0.4
HOXA9-205ENST00000489695 E9PLD3 99 aa12.54□□□□□ -0.4
HOXA9-205ENST00000489695 NDUFC2O95298 119 aa12.54□□□□□ -0.4
HOXA9-205ENST00000489695 SEC61BP60468 96 aaKnown RBP12.54□□□□□ -0.4
HOXA9-205ENST00000489695 S100A12P80511 92 aa12.54□□□□□ -0.4
HOXA9-205ENST00000489695 C4orf48Q5BLP8 95 aa12.54□□□□□ -0.4
HOXA9-205ENST00000489695 B5MCH6 92 aa12.53□□□□□ -0.4
HOXA9-205ENST00000489695 DDTP30046 118 aa12.53□□□□□ -0.4
HOXA9-205ENST00000489695 SPANXB1Q9NS25 103 aaPredicted RBP12.53□□□□□ -0.4
HOXA9-205ENST00000489695 SYS1-DBNDD2H3BUS1 97 aa12.52□□□□□ -0.41
HOXA9-205ENST00000489695 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
HOXA9-205ENST00000489695 MIEN1Q9BRT3 115 aa12.51□□□□□ -0.41
HOXA9-205ENST00000489695 IGLV6-57P01721 117 aa12.5□□□□□ -0.41
HOXA9-205ENST00000489695 KRTDAPP60985 99 aa12.5□□□□□ -0.41
HOXA9-205ENST00000489695 LINC00483Q53H64 154 aa12.5□□□□□ -0.41
HOXA9-205ENST00000489695 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
HOXA9-205ENST00000489695 ADAMTSL4-AS1Q5T5F5 129 aa12.49□□□□□ -0.41
HOXA9-205ENST00000489695 Q8NBF4 154 aa12.49□□□□□ -0.41
HOXA9-205ENST00000489695 SOSTDC1Q6X4U4 206 aa12.48□□□□□ -0.41
HOXA9-205ENST00000489695 SPINK1P00995 79 aa12.47□□□□□ -0.41
HOXA9-205ENST00000489695 LINC01545Q5VT33 79 aa12.47□□□□□ -0.41
HOXA9-205ENST00000489695 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
HOXA9-205ENST00000489695 PET117Q6UWS5 81 aa12.46□□□□□ -0.41
HOXA9-205ENST00000489695 ERC2-IT1O76042 136 aa12.45□□□□□ -0.42
HOXA9-205ENST00000489695 Q6ZRX8 168 aa12.45□□□□□ -0.42
HOXA9-205ENST00000489695 Q9BRP9 147 aa12.45□□□□□ -0.42
HOXA9-205ENST00000489695 S100A7L2Q5SY68 101 aa12.44□□□□□ -0.42
HOXA9-205ENST00000489695 LCE2CQ5TA81 110 aa12.44□□□□□ -0.42
HOXA9-205ENST00000489695 LITAFQ99732 161 aa12.43□□□□□ -0.42
HOXA9-205ENST00000489695 AKR1D1P51857 326 aa12.42□□□□□ -0.42
HOXA9-205ENST00000489695 TRAV23DV6A0A075B6W5 121 aa12.41□□□□□ -0.42
HOXA9-205ENST00000489695 LOC105371267A0A1B0GV96 52 aa12.41□□□□□ -0.42
HOXA9-205ENST00000489695 TIMM17BO60830 172 aa12.41□□□□□ -0.42
HOXA9-205ENST00000489695 NPC2P61916 151 aa12.41□□□□□ -0.42
HOXA9-205ENST00000489695 GAGE2AQ6NT46 116 aa12.41□□□□□ -0.42
HOXA9-205ENST00000489695 C20orf202A1L168 122 aa12.39□□□□□ -0.43
HOXA9-205ENST00000489695 ZNF73O43830 326 aaPredicted RBP12.38□□□□□ -0.43
HOXA9-205ENST00000489695 JOSD1Q15040 202 aaPredicted RBP12.38□□□□□ -0.43
HOXA9-205ENST00000489695 XP32Q5T750 250 aa12.38□□□□□ -0.43
HOXA9-205ENST00000489695 LINC00308Q8TCZ7 52 aa12.38□□□□□ -0.43
HOXA9-205ENST00000489695 SCGB1D1O95968 90 aa12.37□□□□□ -0.43
HOXA9-205ENST00000489695 SSBP3-AS1Q7Z2R9 100 aa12.37□□□□□ -0.43
HOXA9-205ENST00000489695 SPANXCQ9NY87 97 aa12.37□□□□□ -0.43
HOXA9-205ENST00000489695 CBY1Q9Y3M2 126 aa12.37□□□□□ -0.43
HOXA9-205ENST00000489695 RPS29P62273 56 aaKnown RBP12.36□□□□□ -0.43
HOXA9-205ENST00000489695 Q8N377 158 aa12.36□□□□□ -0.43
HOXA9-205ENST00000489695 ZNF815PA8K554 130 aa12.34□□□□□ -0.43
HOXA9-205ENST00000489695 KRTAP19-2Q3LHN2 52 aa12.34□□□□□ -0.43
HOXA9-205ENST00000489695 MOBPQ13875 183 aa12.32□□□□□ -0.44
HOXA9-205ENST00000489695 PYY3Q5JQD4 70 aa12.32□□□□□ -0.44
HOXA9-205ENST00000489695 ATOH7Q8N100 152 aa12.32□□□□□ -0.44
HOXA9-205ENST00000489695 TTTY13Q9BZ97 58 aa12.32□□□□□ -0.44
HOXA9-205ENST00000489695 IGLV9-49A0A0B4J1Y8 123 aa12.31□□□□□ -0.44
HOXA9-205ENST00000489695 HINT1P49773 126 aaPredicted RBP12.3□□□□□ -0.44
HOXA9-205ENST00000489695 MT1HP80294 61 aa12.3□□□□□ -0.44
HOXA9-205ENST00000489695 SLC25A20O43772 301 aa12.29□□□□□ -0.44
HOXA9-205ENST00000489695 SPANXDQ9BXN6 97 aa12.29□□□□□ -0.44
HOXA9-205ENST00000489695 OR13C6PQ8NH95 151 aa12.28□□□□□ -0.44
HOXA9-205ENST00000489695 LINC00518Q8N0U6 118 aa12.27□□□□□ -0.45
HOXA9-205ENST00000489695 ST20-AS1Q8NBB2 130 aa12.27□□□□□ -0.45
HOXA9-205ENST00000489695 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
HOXA9-205ENST00000489695 SPRR1BP22528 89 aa12.24□□□□□ -0.45
HOXA9-205ENST00000489695 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
HOXA9-205ENST00000489695 DHRS4-AS1Q9P1J3 65 aa12.24□□□□□ -0.45
HOXA9-205ENST00000489695 HSBP1L1C9JCN9 74 aa12.22□□□□□ -0.45
HOXA9-205ENST00000489695 SMIM6P0DI80 62 aa12.21□□□□□ -0.45
HOXA9-205ENST00000489695 SCGB1D4Q6XE38 83 aa12.21□□□□□ -0.45
HOXA9-205ENST00000489695 LORP23490 312 aaPredicted RBP12.2□□□□□ -0.46
HOXA9-205ENST00000489695 ELOF1P60002 83 aaKnown RBP12.2□□□□□ -0.46
HOXA9-205ENST00000489695 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
HOXA9-205ENST00000489695 VAMP8Q9BV40 100 aa12.2□□□□□ -0.46
HOXA9-205ENST00000489695 IFITM1P13164 125 aa12.19□□□□□ -0.46
HOXA9-205ENST00000489695 Q6ZVH6 145 aa12.19□□□□□ -0.46
HOXA9-205ENST00000489695 COPS9Q8WXC6 57 aa12.19□□□□□ -0.46
HOXA9-205ENST00000489695 COX7BP24311 80 aa12.18□□□□□ -0.46
HOXA9-205ENST00000489695 C6orf99Q4VX62 202 aa12.18□□□□□ -0.46
HOXA9-205ENST00000489695 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
HOXA9-205ENST00000489695 TRBV7-6A0A0J9YX20 115 aa12.17□□□□□ -0.46
HOXA9-205ENST00000489695 SLC25A34Q6PIV7 304 aa12.17□□□□□ -0.46
HOXA9-205ENST00000489695 PCP2Q8IVA1 136 aa12.16□□□□□ -0.46
HOXA9-205ENST00000489695 KRTAP10-6P60371 365 aaPredicted RBP12.15□□□□□ -0.46
HOXA9-205ENST00000489695 SPATA45Q537H7 98 aa12.15□□□□□ -0.46
HOXA9-205ENST00000489695 PCOTHQ58A44 107 aa12.14□□□□□ -0.47
HOXA9-205ENST00000489695 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
HOXA9-205ENST00000489695 C12orf57Q99622 126 aa12.13□□□□□ -0.47
HOXA9-205ENST00000489695 IGLV8-61A0A075B6I0 122 aa12.12□□□□□ -0.47
HOXA9-205ENST00000489695 LAMTOR3Q9UHA4 124 aa12.12□□□□□ -0.47
HOXA9-205ENST00000489695 A0A1B0GWB2 263 aa12.1□□□□□ -0.47
HOXA9-205ENST00000489695 A6NDN8 102 aa12.09□□□□□ -0.47
HOXA9-205ENST00000489695 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
HOXA9-205ENST00000489695 TAL2Q16559 108 aa12.08□□□□□ -0.48
HOXA9-205ENST00000489695 C14orf144Q96I85 54 aa12.07□□□□□ -0.48
HOXA9-205ENST00000489695 TRAV13-2A0A0B4J235 113 aa12.05□□□□□ -0.48
HOXA9-205ENST00000489695 A4D1N5 150 aa12.05□□□□□ -0.48
HOXA9-205ENST00000489695 COX8AP10176 69 aa12.05□□□□□ -0.48
HOXA9-205ENST00000489695 DEFB105AQ8NG35 78 aa12.05□□□□□ -0.48
HOXA9-205ENST00000489695 LIMD2Q9BT23 127 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms