RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 LIMD2Q9BT23 127 aa0.74□□□□□ -2.29
NEK2-204ENST00000489633 HILPDAQ9Y5L2 63 aa0.74□□□□□ -2.29
NEK2-204ENST00000489633 RBAKDNA6NC62 111 aa0.73□□□□□ -2.29
NEK2-204ENST00000489633 M0R1W7 72 aa0.73□□□□□ -2.29
NEK2-204ENST00000489633 IL7P13232 177 aa0.73□□□□□ -2.29
NEK2-204ENST00000489633 RPS25P62851 125 aaKnown RBP0.73□□□□□ -2.29
NEK2-204ENST00000489633 RBM3P98179 157 aaKnown RBP0.73□□□□□ -2.29
NEK2-204ENST00000489633 FAM74A4Q5TZK3 123 aa0.73□□□□□ -2.29
NEK2-204ENST00000489633 Q8N6K4 173 aa0.73□□□□□ -2.29
NEK2-204ENST00000489633 WFDC6Q9BQY6 131 aa0.73□□□□□ -2.29
NEK2-204ENST00000489633 TCRBV3S1A0A5B6 114 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 ZNF670-ZNF695F2Z2N8 137 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 GYPAP02724 150 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 SSBP1Q04837 148 aaKnown RBP0.72□□□□□ -2.29
NEK2-204ENST00000489633 WFDC2Q14508 124 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 ZNF56Q15929 161 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 CYP2G1PQ6ZSU1 146 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 Q86TA4 180 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 C5orf56Q8N8D9 126 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 ARL11Q969Q4 196 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 TMEM141Q96I45 108 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 DSCR8Q96T75 97 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 SPANXDQ9BXN6 97 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 RERGLQ9H628 205 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 TMEM14BQ9NUH8 114 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 SCP2D1Q9UJQ7 156 aa0.72□□□□□ -2.29
NEK2-204ENST00000489633 IGKCP01834 107 aa0.71□□□□□ -2.3
NEK2-204ENST00000489633 FXYD3Q14802 87 aa0.71□□□□□ -2.3
NEK2-204ENST00000489633 IQCJQ1A5X6 159 aa0.71□□□□□ -2.3
NEK2-204ENST00000489633 C12orf73Q69YU5 71 aa0.71□□□□□ -2.3
NEK2-204ENST00000489633 OR2T2Q6IF00 324 aa0.71□□□□□ -2.3
NEK2-204ENST00000489633 RPRMQ9NS64 109 aa0.71□□□□□ -2.3
NEK2-204ENST00000489633 LSM2Q9Y333 95 aaKnown RBP0.71□□□□□ -2.3
NEK2-204ENST00000489633 FXYD1O00168 92 aa0.7□□□□□ -2.3
NEK2-204ENST00000489633 NDUFA2O43678 99 aa0.7□□□□□ -2.3
NEK2-204ENST00000489633 NDUFB6O95139 128 aa0.7□□□□□ -2.3
NEK2-204ENST00000489633 SPART-AS1P0CW21 52 aa0.7□□□□□ -2.3
NEK2-204ENST00000489633 LINC00694P0DN24 101 aa0.7□□□□□ -2.3
NEK2-204ENST00000489633 SPTSSAQ969W0 71 aa0.7□□□□□ -2.3
NEK2-204ENST00000489633 KAAG1Q9UBP8 84 aa0.7□□□□□ -2.3
NEK2-204ENST00000489633 FAM25AB3EWG3 89 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 FAM25CB3EWG5 89 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 FAM25GB3EWG6 89 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 G3V318 75 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 SNCGO76070 127 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 IL5P05113 134 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 SLC25A6P12236 298 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 ZNF137PP52743 207 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 EMX2Q04743 252 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 SLC48A1Q6P1K1 146 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 Q6ZUT4 128 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 FAM107BQ9H098 131 aa0.69□□□□□ -2.3
NEK2-204ENST00000489633 FAM236AA0A1B0GUQ0 79 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 FAM236BA0A1B0GV22 79 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 LOC101927531A0A1B0GV80 90 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 F2Z2F3 143 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 K7EP13 123 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 CCL22O00626 93 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 SMIM6P0DI80 62 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 FGF7P21781 194 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 CBLN1P23435 193 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 SNRPFP62306 86 aaKnown RBP0.68□□□□□ -2.3
NEK2-204ENST00000489633 SPATA8Q6RVD6 105 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 SNRNP25Q9BV90 132 aaKnown RBP0.68□□□□□ -2.3
NEK2-204ENST00000489633 TMEM242Q9NWH2 141 aa0.68□□□□□ -2.3
NEK2-204ENST00000489633 RPL37P61927 97 aaKnown RBP0.67□□□□□ -2.3
NEK2-204ENST00000489633 C9orf116Q5BN46 136 aaPredicted RBP0.67□□□□□ -2.3
NEK2-204ENST00000489633 MINOS1Q5TGZ0 78 aa0.67□□□□□ -2.3
NEK2-204ENST00000489633 ZNF818PQ6ZRF7 136 aa0.67□□□□□ -2.3
NEK2-204ENST00000489633 LINC00208Q96KT6 92 aa0.67□□□□□ -2.3
NEK2-204ENST00000489633 LINC00470Q9BZP3 86 aa0.67□□□□□ -2.3
NEK2-204ENST00000489633 NAA60Q9H7X0 242 aa0.67□□□□□ -2.3
NEK2-204ENST00000489633 NDUFA12Q9UI09 145 aa0.67□□□□□ -2.3
NEK2-204ENST00000489633 TRAV12-3A0A0B4J271 114 aa0.66□□□□□ -2.3
NEK2-204ENST00000489633 LOC285095A0A1B0GVY8 99 aa0.66□□□□□ -2.3
NEK2-204ENST00000489633 PITX3O75364 302 aa0.66□□□□□ -2.3
NEK2-204ENST00000489633 CCL3L1P16619 93 aa0.66□□□□□ -2.3
NEK2-204ENST00000489633 TSKUQ8WUA8 353 aa0.66□□□□□ -2.3
NEK2-204ENST00000489633 IFI27L1Q96BM0 104 aa0.66□□□□□ -2.3
NEK2-204ENST00000489633 C10orf95Q9H7T3 257 aa0.66□□□□□ -2.3
NEK2-204ENST00000489633 TRBV7-1A0A0A6YYK4 115 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 TRBV10-3A0A0K0K1G6 114 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 MIC13Q5XKP0 118 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 RPL13AP3Q6NVV1 102 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 COX7B2Q8TF08 81 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 DPH3Q96FX2 82 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 PRR15LQ9BU68 103 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 PDCD10Q9BUL8 212 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 V9GYV3 84 aa0.65□□□□□ -2.31
NEK2-204ENST00000489633 APOC4-APOC2K7ER74 178 aa0.64□□□□□ -2.31
NEK2-204ENST00000489633 MT1BP07438 61 aa0.64□□□□□ -2.31
NEK2-204ENST00000489633 SPINK7P58062 85 aa0.64□□□□□ -2.31
NEK2-204ENST00000489633 TDRG1Q3Y452 100 aa0.64□□□□□ -2.31
NEK2-204ENST00000489633 PPP3R2Q96LZ3 170 aa0.64□□□□□ -2.31
NEK2-204ENST00000489633 SDF2Q99470 211 aa0.64□□□□□ -2.31
NEK2-204ENST00000489633 MRPS10P82664 201 aaKnown RBP0.63□□□□□ -2.31
NEK2-204ENST00000489633 AQP10Q96PS8 301 aa0.63□□□□□ -2.31
NEK2-204ENST00000489633 SERP1Q9Y6X1 66 aa0.63□□□□□ -2.31
NEK2-204ENST00000489633 IFNGP01579 166 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms