RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 MIEN1Q9BRT3 115 aa6.84□□□□□ -1.31
CPSF3-204ENST00000489403 TRAV23DV6A0A075B6W5 121 aa6.83□□□□□ -1.32
CPSF3-204ENST00000489403 J3QQQ9 107 aa6.83□□□□□ -1.32
CPSF3-204ENST00000489403 JOSD1Q15040 202 aaPredicted RBP6.83□□□□□ -1.32
CPSF3-204ENST00000489403 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
CPSF3-204ENST00000489403 S100A7L2Q5SY68 101 aa6.83□□□□□ -1.32
CPSF3-204ENST00000489403 LEPROTL1O95214 131 aa6.82□□□□□ -1.32
CPSF3-204ENST00000489403 LINC00310P59036 64 aa6.82□□□□□ -1.32
CPSF3-204ENST00000489403 SOSTDC1Q6X4U4 206 aa6.82□□□□□ -1.32
CPSF3-204ENST00000489403 ST20-AS1Q8NBB2 130 aa6.82□□□□□ -1.32
CPSF3-204ENST00000489403 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
CPSF3-204ENST00000489403 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
CPSF3-204ENST00000489403 PLNP26678 52 aa6.81□□□□□ -1.32
CPSF3-204ENST00000489403 NMUP48645 174 aa6.81□□□□□ -1.32
CPSF3-204ENST00000489403 PMCHL2Q9BQD1 86 aa6.81□□□□□ -1.32
CPSF3-204ENST00000489403 LGALS3P17931 250 aaKnown RBP6.8□□□□□ -1.32
CPSF3-204ENST00000489403 HERVK_113P61574 105 aa6.8□□□□□ -1.32
CPSF3-204ENST00000489403 NPC2P61916 151 aa6.8□□□□□ -1.32
CPSF3-204ENST00000489403 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
CPSF3-204ENST00000489403 SERF1AO75920 110 aa6.79□□□□□ -1.32
CPSF3-204ENST00000489403 DPM2O94777 84 aa6.79□□□□□ -1.32
CPSF3-204ENST00000489403 IGKCP01834 107 aa6.78□□□□□ -1.32
CPSF3-204ENST00000489403 TRGC2P03986 189 aa6.78□□□□□ -1.32
CPSF3-204ENST00000489403 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
CPSF3-204ENST00000489403 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
CPSF3-204ENST00000489403 A0A0J9YXY3 114 aa6.77□□□□□ -1.33
CPSF3-204ENST00000489403 C5orf52A6NGY3 159 aa6.77□□□□□ -1.33
CPSF3-204ENST00000489403 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
CPSF3-204ENST00000489403 FABP4P15090 132 aa6.76□□□□□ -1.33
CPSF3-204ENST00000489403 SPRR1BP22528 89 aa6.76□□□□□ -1.33
CPSF3-204ENST00000489403 HRCT1Q6UXD1 115 aa6.76□□□□□ -1.33
CPSF3-204ENST00000489403 HSPB8Q9UJY1 196 aa6.76□□□□□ -1.33
CPSF3-204ENST00000489403 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
CPSF3-204ENST00000489403 MT1HP80294 61 aa6.75□□□□□ -1.33
CPSF3-204ENST00000489403 PCOTHQ58A44 107 aa6.75□□□□□ -1.33
CPSF3-204ENST00000489403 LIMD2Q9BT23 127 aa6.75□□□□□ -1.33
CPSF3-204ENST00000489403 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
CPSF3-204ENST00000489403 E9PLD3 99 aa6.74□□□□□ -1.33
CPSF3-204ENST00000489403 CBY1Q9Y3M2 126 aa6.74□□□□□ -1.33
CPSF3-204ENST00000489403 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
CPSF3-204ENST00000489403 SLC25A34Q6PIV7 304 aa6.72□□□□□ -1.33
CPSF3-204ENST00000489403 LINC00308Q8TCZ7 52 aa6.72□□□□□ -1.33
CPSF3-204ENST00000489403 LITAFQ99732 161 aa6.72□□□□□ -1.33
CPSF3-204ENST00000489403 SPANXCQ9NY87 97 aa6.72□□□□□ -1.33
CPSF3-204ENST00000489403 DHRS4-AS1Q9P1J3 65 aa6.72□□□□□ -1.33
CPSF3-204ENST00000489403 OR13C6PQ8NH95 151 aa6.71□□□□□ -1.34
CPSF3-204ENST00000489403 LAMTOR3Q9UHA4 124 aa6.71□□□□□ -1.34
CPSF3-204ENST00000489403 CFC1BP0CG36 223 aa6.69□□□□□ -1.34
CPSF3-204ENST00000489403 ELOF1P60002 83 aaKnown RBP6.69□□□□□ -1.34
CPSF3-204ENST00000489403 TIMM17BO60830 172 aa6.68□□□□□ -1.34
CPSF3-204ENST00000489403 Q1RN00 199 aa6.68□□□□□ -1.34
CPSF3-204ENST00000489403 SPANXDQ9BXN6 97 aa6.68□□□□□ -1.34
CPSF3-204ENST00000489403 H3BS24 57 aa6.67□□□□□ -1.34
CPSF3-204ENST00000489403 COX7BP24311 80 aa6.67□□□□□ -1.34
CPSF3-204ENST00000489403 CD164Q04900 197 aa6.67□□□□□ -1.34
CPSF3-204ENST00000489403 C6orf99Q4VX62 202 aa6.67□□□□□ -1.34
CPSF3-204ENST00000489403 H7C2G1 150 aa6.66□□□□□ -1.34
CPSF3-204ENST00000489403 TAL2Q16559 108 aa6.66□□□□□ -1.34
CPSF3-204ENST00000489403 DEFB105AQ8NG35 78 aa6.66□□□□□ -1.34
CPSF3-204ENST00000489403 PRO1933Q9H354 126 aa6.66□□□□□ -1.34
CPSF3-204ENST00000489403 ZNF815PA8K554 130 aa6.65□□□□□ -1.34
CPSF3-204ENST00000489403 SYS1-DBNDD2H3BUS1 97 aa6.65□□□□□ -1.34
CPSF3-204ENST00000489403 KRTAP10-6P60371 365 aaPredicted RBP6.65□□□□□ -1.34
CPSF3-204ENST00000489403 TTTY13Q9BZ97 58 aa6.65□□□□□ -1.34
CPSF3-204ENST00000489403 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
CPSF3-204ENST00000489403 COLCA2A8K830 154 aa6.64□□□□□ -1.35
CPSF3-204ENST00000489403 Q5XG85 94 aa6.64□□□□□ -1.35
CPSF3-204ENST00000489403 SMIM29Q86T20 159 aa6.64□□□□□ -1.35
CPSF3-204ENST00000489403 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
CPSF3-204ENST00000489403 C1orf195Q5TG92 126 aa6.63□□□□□ -1.35
CPSF3-204ENST00000489403 LINC00518Q8N0U6 118 aa6.63□□□□□ -1.35
CPSF3-204ENST00000489403 A0A0G2JQZ4 141 aa6.62□□□□□ -1.35
CPSF3-204ENST00000489403 RPL37P61927 97 aaKnown RBP6.62□□□□□ -1.35
CPSF3-204ENST00000489403 LINC01545Q5VT33 79 aa6.62□□□□□ -1.35
CPSF3-204ENST00000489403 AKR1D1P51857 326 aa6.61□□□□□ -1.35
CPSF3-204ENST00000489403 IGLV5-48A0A075B6I7 105 aa6.6□□□□□ -1.35
CPSF3-204ENST00000489403 TRBV7-6A0A0J9YX20 115 aa6.6□□□□□ -1.35
CPSF3-204ENST00000489403 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
CPSF3-204ENST00000489403 PET117Q6UWS5 81 aa6.59□□□□□ -1.35
CPSF3-204ENST00000489403 M0R2T5 61 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BKO60814 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BJP06899 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BOP23527 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BBP33778 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BDP58876 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BCP62807 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST2H2BEQ16778 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BHQ93079 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BNQ99877 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 HIST1H2BMQ99879 126 aa6.58□□□□□ -1.36
CPSF3-204ENST00000489403 C3orf79P0CE67 100 aa6.56□□□□□ -1.36
CPSF3-204ENST00000489403 SCGB1D4Q6XE38 83 aa6.56□□□□□ -1.36
CPSF3-204ENST00000489403 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
CPSF3-204ENST00000489403 TMA7Q9Y2S6 64 aaKnown RBP6.56□□□□□ -1.36
CPSF3-204ENST00000489403 A6NDN8 102 aa6.55□□□□□ -1.36
CPSF3-204ENST00000489403 SLC7A5P1Q8MH63 180 aa6.55□□□□□ -1.36
CPSF3-204ENST00000489403 IFITM1P13164 125 aa6.54□□□□□ -1.36
CPSF3-204ENST00000489403 COPS9Q8WXC6 57 aa6.54□□□□□ -1.36
CPSF3-204ENST00000489403 A4D1N5 150 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms