RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SMCR5Q8TEV8 140 aa5.29□□□□□ -1.56
SNX17-207ENST00000489402 TMEM223A0PJW6 202 aa5.28□□□□□ -1.56
SNX17-207ENST00000489402 SMIM13P0DJ93 91 aa5.28□□□□□ -1.56
SNX17-207ENST00000489402 SPRR1AP35321 89 aa5.28□□□□□ -1.56
SNX17-207ENST00000489402 HERV-K104P63124 156 aa5.28□□□□□ -1.56
SNX17-207ENST00000489402 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
SNX17-207ENST00000489402 KCNQ1DNQ9H478 68 aa5.28□□□□□ -1.56
SNX17-207ENST00000489402 LINC00587B1AMM8 73 aa5.27□□□□□ -1.57
SNX17-207ENST00000489402 HSBP1O75506 76 aa5.27□□□□□ -1.57
SNX17-207ENST00000489402 LINC00483Q53H64 154 aa5.27□□□□□ -1.57
SNX17-207ENST00000489402 GAGE2AQ6NT46 116 aa5.27□□□□□ -1.57
SNX17-207ENST00000489402 IGLV9-49A0A0B4J1Y8 123 aa5.26□□□□□ -1.57
SNX17-207ENST00000489402 TRBV10-3A0A0K0K1G6 114 aa5.26□□□□□ -1.57
SNX17-207ENST00000489402 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
SNX17-207ENST00000489402 MOBPQ13875 183 aa5.26□□□□□ -1.57
SNX17-207ENST00000489402 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
SNX17-207ENST00000489402 MAP1LC3CQ9BXW4 147 aa5.26□□□□□ -1.57
SNX17-207ENST00000489402 TRAV12-1A0A0B4J245 112 aa5.25□□□□□ -1.57
SNX17-207ENST00000489402 KRTAP4-16G5E9R7 235 aaPredicted RBP5.25□□□□□ -1.57
SNX17-207ENST00000489402 C3orf79P0CE67 100 aa5.25□□□□□ -1.57
SNX17-207ENST00000489402 SSBP3-AS1Q7Z2R9 100 aa5.25□□□□□ -1.57
SNX17-207ENST00000489402 IFI27L1Q96BM0 104 aa5.25□□□□□ -1.57
SNX17-207ENST00000489402 MYMXA0A1B0GTQ4 84 aa5.24□□□□□ -1.57
SNX17-207ENST00000489402 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
SNX17-207ENST00000489402 SLC25A20O43772 301 aa5.24□□□□□ -1.57
SNX17-207ENST00000489402 Q8N377 158 aa5.24□□□□□ -1.57
SNX17-207ENST00000489402 B5MCH6 92 aa5.23□□□□□ -1.57
SNX17-207ENST00000489402 LEPROTL1O95214 131 aa5.23□□□□□ -1.57
SNX17-207ENST00000489402 SCGB1D1O95968 90 aa5.23□□□□□ -1.57
SNX17-207ENST00000489402 KRTDAPP60985 99 aa5.23□□□□□ -1.57
SNX17-207ENST00000489402 DDTP30046 118 aa5.22□□□□□ -1.57
SNX17-207ENST00000489402 Q6ZRX8 168 aa5.22□□□□□ -1.57
SNX17-207ENST00000489402 HSPB8Q9UJY1 196 aa5.22□□□□□ -1.57
SNX17-207ENST00000489402 TRBV10-2A0A0K0K1G8 114 aa5.21□□□□□ -1.58
SNX17-207ENST00000489402 SYS1-DBNDD2H3BUS1 97 aa5.21□□□□□ -1.58
SNX17-207ENST00000489402 ERC2-IT1O76042 136 aa5.21□□□□□ -1.58
SNX17-207ENST00000489402 C9orf153Q5TBE3 101 aa5.21□□□□□ -1.58
SNX17-207ENST00000489402 PET117Q6UWS5 81 aa5.21□□□□□ -1.58
SNX17-207ENST00000489402 MIEN1Q9BRT3 115 aa5.21□□□□□ -1.58
SNX17-207ENST00000489402 SPANXB1Q9NS25 103 aaPredicted RBP5.21□□□□□ -1.58
SNX17-207ENST00000489402 LOC107984156A0A0G2JMH3 177 aa5.2□□□□□ -1.58
SNX17-207ENST00000489402 PCP4L1A6NKN8 68 aa5.2□□□□□ -1.58
SNX17-207ENST00000489402 H0Y8G0 127 aa5.2□□□□□ -1.58
SNX17-207ENST00000489402 S100A7L2Q5SY68 101 aa5.2□□□□□ -1.58
SNX17-207ENST00000489402 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
SNX17-207ENST00000489402 ARL17AQ8IVW1 177 aa5.2□□□□□ -1.58
SNX17-207ENST00000489402 Q9BRP9 147 aa5.2□□□□□ -1.58
SNX17-207ENST00000489402 LINC01545Q5VT33 79 aa5.19□□□□□ -1.58
SNX17-207ENST00000489402 C20orf202A1L168 122 aa5.18□□□□□ -1.58
SNX17-207ENST00000489402 TSTD3H0UI37 97 aa5.18□□□□□ -1.58
SNX17-207ENST00000489402 LEPROTO15243 131 aa5.18□□□□□ -1.58
SNX17-207ENST00000489402 VAMP8Q9BV40 100 aa5.18□□□□□ -1.58
SNX17-207ENST00000489402 PRO1933Q9H354 126 aa5.18□□□□□ -1.58
SNX17-207ENST00000489402 TRAV23DV6A0A075B6W5 121 aa5.17□□□□□ -1.58
SNX17-207ENST00000489402 NDUFC2O95298 119 aa5.17□□□□□ -1.58
SNX17-207ENST00000489402 IGLV6-57P01721 117 aa5.17□□□□□ -1.58
SNX17-207ENST00000489402 NMUP48645 174 aa5.17□□□□□ -1.58
SNX17-207ENST00000489402 TSPEAR-AS2P59090 65 aa5.17□□□□□ -1.58
SNX17-207ENST00000489402 HERVK_113P61574 105 aa5.17□□□□□ -1.58
SNX17-207ENST00000489402 J3QQQ9 107 aa5.16□□□□□ -1.58
SNX17-207ENST00000489402 ZNF73O43830 326 aaPredicted RBP5.16□□□□□ -1.58
SNX17-207ENST00000489402 LGALS3P17931 250 aaKnown RBP5.16□□□□□ -1.58
SNX17-207ENST00000489402 PLNP26678 52 aa5.16□□□□□ -1.58
SNX17-207ENST00000489402 HINT1P49773 126 aaPredicted RBP5.16□□□□□ -1.58
SNX17-207ENST00000489402 LIMD2Q9BT23 127 aa5.16□□□□□ -1.58
SNX17-207ENST00000489402 PAM16Q9Y3D7 125 aa5.16□□□□□ -1.58
SNX17-207ENST00000489402 CBY1Q9Y3M2 126 aa5.16□□□□□ -1.58
SNX17-207ENST00000489402 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.59
SNX17-207ENST00000489402 SPATA45Q537H7 98 aa5.15□□□□□ -1.59
SNX17-207ENST00000489402 LCE3BQ5TA77 95 aa5.15□□□□□ -1.59
SNX17-207ENST00000489402 SLC25A34Q6PIV7 304 aa5.15□□□□□ -1.59
SNX17-207ENST00000489402 ATOH7Q8N100 152 aa5.15□□□□□ -1.59
SNX17-207ENST00000489402 ST20-AS1Q8NBB2 130 aa5.14□□□□□ -1.59
SNX17-207ENST00000489402 DPM2O94777 84 aa5.13□□□□□ -1.59
SNX17-207ENST00000489402 NPC2P61916 151 aa5.13□□□□□ -1.59
SNX17-207ENST00000489402 IGLV8-61A0A075B6I0 122 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 IGKCP01834 107 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 CFC1BP0CG36 223 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 PCOTHQ58A44 107 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 HRCT1Q6UXD1 115 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 C14orf144Q96I85 54 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 PMCHL2Q9BQD1 86 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 UQCR10Q9UDW1 63 aa5.12□□□□□ -1.59
SNX17-207ENST00000489402 C9orf92A6NGG3 77 aa5.11□□□□□ -1.59
SNX17-207ENST00000489402 HSBP1L1C9JCN9 74 aa5.11□□□□□ -1.59
SNX17-207ENST00000489402 SOSTDC1Q6X4U4 206 aa5.11□□□□□ -1.59
SNX17-207ENST00000489402 DHRS4-AS1Q9P1J3 65 aa5.11□□□□□ -1.59
SNX17-207ENST00000489402 LAMTOR3Q9UHA4 124 aa5.11□□□□□ -1.59
SNX17-207ENST00000489402 A0A0J9YXY3 114 aa5.1□□□□□ -1.59
SNX17-207ENST00000489402 SPRR1BP22528 89 aa5.1□□□□□ -1.59
SNX17-207ENST00000489402 MT1HP80294 61 aa5.1□□□□□ -1.59
SNX17-207ENST00000489402 ANKRD39Q53RE8 183 aa5.1□□□□□ -1.59
SNX17-207ENST00000489402 OR13C6PQ8NH95 151 aa5.1□□□□□ -1.59
SNX17-207ENST00000489402 DLEU1O43261 78 aa5.09□□□□□ -1.59
SNX17-207ENST00000489402 COX8AP10176 69 aa5.09□□□□□ -1.59
SNX17-207ENST00000489402 ADAMTSL4-AS1Q5T5F5 129 aa5.09□□□□□ -1.59
SNX17-207ENST00000489402 SPANXCQ9NY87 97 aa5.09□□□□□ -1.59
SNX17-207ENST00000489402 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
SNX17-207ENST00000489402 E9PLD3 99 aa5.08□□□□□ -1.6
SNX17-207ENST00000489402 COX7BP24311 80 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms