RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 C7orf33Q8WU49 177 aa7□□□□□ -1.29
ITSN1-231ENST00000489261 LINC00476Q8WZB0 136 aa7□□□□□ -1.29
ITSN1-231ENST00000489261 PDE6GP18545 87 aa6.99□□□□□ -1.29
ITSN1-231ENST00000489261 SERTAD4-AS1Q5TG53 156 aa6.99□□□□□ -1.29
ITSN1-231ENST00000489261 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
ITSN1-231ENST00000489261 IGLV1-50A0A075B6I6 118 aa6.98□□□□□ -1.29
ITSN1-231ENST00000489261 XGP55808 180 aa6.98□□□□□ -1.29
ITSN1-231ENST00000489261 Q6Q795 121 aa6.98□□□□□ -1.29
ITSN1-231ENST00000489261 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
ITSN1-231ENST00000489261 DNAH1Q9P2D7 4330 aa6.98□□□□□ -1.29
ITSN1-231ENST00000489261 ALMS1Q8TCU4 4167 aa6.98□□□□□ -1.29
ITSN1-231ENST00000489261 MT-ATP8P03928 68 aa6.97□□□□□ -1.29
ITSN1-231ENST00000489261 CCKP06307 115 aa6.97□□□□□ -1.29
ITSN1-231ENST00000489261 SPRR1AP35321 89 aa6.97□□□□□ -1.29
ITSN1-231ENST00000489261 RBM3P98179 157 aaKnown RBP6.97□□□□□ -1.29
ITSN1-231ENST00000489261 GAGE2AQ6NT46 116 aa6.97□□□□□ -1.29
ITSN1-231ENST00000489261 SDIM1Q6ZPB5 146 aa6.97□□□□□ -1.29
ITSN1-231ENST00000489261 Q6ZQY7 126 aa6.97□□□□□ -1.29
ITSN1-231ENST00000489261 MRPL55Q7Z7F7 128 aaKnown RBP6.97□□□□□ -1.29
ITSN1-231ENST00000489261 LINC00643Q86TS7 51 aa6.97□□□□□ -1.29
ITSN1-231ENST00000489261 PLECQ15149 4684 aaKnown RBP6.97□□□□□ -1.29
ITSN1-231ENST00000489261 LRCOL1A6NCL2 159 aa6.96□□□□□ -1.3
ITSN1-231ENST00000489261 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
ITSN1-231ENST00000489261 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
ITSN1-231ENST00000489261 C14orf132Q9NPU4 83 aa6.96□□□□□ -1.3
ITSN1-231ENST00000489261 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.3
ITSN1-231ENST00000489261 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
ITSN1-231ENST00000489261 LY6G6CO95867 125 aa6.95□□□□□ -1.3
ITSN1-231ENST00000489261 LAMTOR3Q9UHA4 124 aa6.95□□□□□ -1.3
ITSN1-231ENST00000489261 ETDCA0A1B0GVM5 59 aa6.94□□□□□ -1.3
ITSN1-231ENST00000489261 Q6ZRN7 208 aaPredicted RBP6.94□□□□□ -1.3
ITSN1-231ENST00000489261 B5MCH6 92 aa6.93□□□□□ -1.3
ITSN1-231ENST00000489261 KRTAP4-16G5E9R7 235 aaPredicted RBP6.93□□□□□ -1.3
ITSN1-231ENST00000489261 LCE2DQ5TA82 110 aaPredicted RBP6.93□□□□□ -1.3
ITSN1-231ENST00000489261 DSCR8Q96T75 97 aa6.93□□□□□ -1.3
ITSN1-231ENST00000489261 A0A096LNI7 61 aa6.92□□□□□ -1.3
ITSN1-231ENST00000489261 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
ITSN1-231ENST00000489261 Q6ZRX8 168 aa6.92□□□□□ -1.3
ITSN1-231ENST00000489261 FAM19A5Q7Z5A7 132 aaPredicted RBP6.92□□□□□ -1.3
ITSN1-231ENST00000489261 KRTAP7-1Q8IUC3 87 aa6.92□□□□□ -1.3
ITSN1-231ENST00000489261 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
ITSN1-231ENST00000489261 NDUFV3P56181 108 aaKnown RBP6.91□□□□□ -1.3
ITSN1-231ENST00000489261 REG3GQ6UW15 175 aa6.91□□□□□ -1.3
ITSN1-231ENST00000489261 Q6ZR54 194 aa6.91□□□□□ -1.3
ITSN1-231ENST00000489261 KMT2AQ03164 3969 aa6.91□□□□□ -1.3
ITSN1-231ENST00000489261 EPPK1P58107 5090 aaKnown RBP6.9□□□□□ -1.3
ITSN1-231ENST00000489261 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
ITSN1-231ENST00000489261 RPL37AP8A6NKH3 93 aa6.9□□□□□ -1.3
ITSN1-231ENST00000489261 Q6ZQT0 140 aa6.9□□□□□ -1.3
ITSN1-231ENST00000489261 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
ITSN1-231ENST00000489261 A0A1W2PNN7 141 aa6.88□□□□□ -1.31
ITSN1-231ENST00000489261 Q6JHZ5 121 aa6.88□□□□□ -1.31
ITSN1-231ENST00000489261 A0A087WTM6 91 aa6.87□□□□□ -1.31
ITSN1-231ENST00000489261 TRBV7-4A0A0J9YYF1 115 aa6.87□□□□□ -1.31
ITSN1-231ENST00000489261 ATP5EP2Q5VTU8 51 aa6.87□□□□□ -1.31
ITSN1-231ENST00000489261 SMCR5Q8TEV8 140 aa6.87□□□□□ -1.31
ITSN1-231ENST00000489261 LINC00846Q9NV44 126 aa6.87□□□□□ -1.31
ITSN1-231ENST00000489261 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
ITSN1-231ENST00000489261 A0A1B0GW54 56 aa6.86□□□□□ -1.31
ITSN1-231ENST00000489261 H0Y9J4 135 aa6.86□□□□□ -1.31
ITSN1-231ENST00000489261 M0R2N4 97 aa6.86□□□□□ -1.31
ITSN1-231ENST00000489261 UBL5Q9BZL1 73 aa6.86□□□□□ -1.31
ITSN1-231ENST00000489261 EPM2AB3EWF7 344 aa6.85□□□□□ -1.31
ITSN1-231ENST00000489261 UBE2BP63146 152 aa6.85□□□□□ -1.31
ITSN1-231ENST00000489261 C1orf134Q5TEV5 83 aa6.85□□□□□ -1.31
ITSN1-231ENST00000489261 Q8N377 158 aa6.85□□□□□ -1.31
ITSN1-231ENST00000489261 Q9BRP9 147 aa6.85□□□□□ -1.31
ITSN1-231ENST00000489261 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
ITSN1-231ENST00000489261 DNAH6Q9C0G6 4158 aa6.83□□□□□ -1.32
ITSN1-231ENST00000489261 A0A1B0GV72 72 aa6.83□□□□□ -1.32
ITSN1-231ENST00000489261 LINC01547P58512 204 aaPredicted RBP6.83□□□□□ -1.32
ITSN1-231ENST00000489261 VPS13DQ5THJ4 4388 aa6.83□□□□□ -1.32
ITSN1-231ENST00000489261 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
ITSN1-231ENST00000489261 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
ITSN1-231ENST00000489261 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
ITSN1-231ENST00000489261 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
ITSN1-231ENST00000489261 CHTF8P0CG12 524 aa6.8□□□□□ -1.32
ITSN1-231ENST00000489261 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
ITSN1-231ENST00000489261 SPACA4Q8TDM5 124 aa6.8□□□□□ -1.32
ITSN1-231ENST00000489261 RTL8CO15255 209 aa6.79□□□□□ -1.32
ITSN1-231ENST00000489261 ANAPC13Q9BS18 74 aa6.79□□□□□ -1.32
ITSN1-231ENST00000489261 BCE1O60756 84 aa6.78□□□□□ -1.32
ITSN1-231ENST00000489261 ERC2-IT1O76042 136 aa6.78□□□□□ -1.32
ITSN1-231ENST00000489261 TNP2Q05952 138 aa6.78□□□□□ -1.32
ITSN1-231ENST00000489261 IGKV3D-7A0A0C4DH55 119 aa6.77□□□□□ -1.33
ITSN1-231ENST00000489261 F8WEM9 126 aa6.77□□□□□ -1.33
ITSN1-231ENST00000489261 FUSP35637 526 aaKnown RBP eCLIP6.77□□□□□ -1.33
ITSN1-231ENST00000489261 ST20-AS1Q8NBB2 130 aa6.77□□□□□ -1.33
ITSN1-231ENST00000489261 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
ITSN1-231ENST00000489261 SPRR1BP22528 89 aa6.76□□□□□ -1.33
ITSN1-231ENST00000489261 UBE2AP49459 152 aa6.76□□□□□ -1.33
ITSN1-231ENST00000489261 CXCL6P80162 114 aa6.76□□□□□ -1.33
ITSN1-231ENST00000489261 Q6ZVQ6 151 aa6.76□□□□□ -1.33
ITSN1-231ENST00000489261 IGLV8-61A0A075B6I0 122 aa6.75□□□□□ -1.33
ITSN1-231ENST00000489261 C1orf137Q5JT78 98 aa6.75□□□□□ -1.33
ITSN1-231ENST00000489261 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
ITSN1-231ENST00000489261 SMIM29Q86T20 159 aa6.75□□□□□ -1.33
ITSN1-231ENST00000489261 PLAC8Q9NZF1 115 aa6.75□□□□□ -1.33
ITSN1-231ENST00000489261 PRLHP81277 87 aa6.74□□□□□ -1.33
ITSN1-231ENST00000489261 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms