RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TSPEAR-AS2P59090 65 aa10.71□□□□□ -0.69
SMPDL3A-202ENST00000487215 NDUFC2O95298 119 aa10.7□□□□□ -0.7
SMPDL3A-202ENST00000487215 IGKCP01834 107 aa10.7□□□□□ -0.7
SMPDL3A-202ENST00000487215 MT1HP80294 61 aa10.7□□□□□ -0.7
SMPDL3A-202ENST00000487215 S100A7L2Q5SY68 101 aa10.7□□□□□ -0.7
SMPDL3A-202ENST00000487215 JOSD1Q15040 202 aaPredicted RBP10.69□□□□□ -0.7
SMPDL3A-202ENST00000487215 Q6ZRX8 168 aa10.69□□□□□ -0.7
SMPDL3A-202ENST00000487215 FABP4P15090 132 aa10.68□□□□□ -0.7
SMPDL3A-202ENST00000487215 Q9BRP9 147 aa10.68□□□□□ -0.7
SMPDL3A-202ENST00000487215 CBY1Q9Y3M2 126 aa10.68□□□□□ -0.7
SMPDL3A-202ENST00000487215 LINC00310P59036 64 aa10.67□□□□□ -0.7
SMPDL3A-202ENST00000487215 IGLV6-57P01721 117 aa10.66□□□□□ -0.7
SMPDL3A-202ENST00000487215 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
SMPDL3A-202ENST00000487215 PMCHL2Q9BQD1 86 aa10.64□□□□□ -0.71
SMPDL3A-202ENST00000487215 TRAV23DV6A0A075B6W5 121 aa10.63□□□□□ -0.71
SMPDL3A-202ENST00000487215 HINT1P49773 126 aaPredicted RBP10.63□□□□□ -0.71
SMPDL3A-202ENST00000487215 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
SMPDL3A-202ENST00000487215 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
SMPDL3A-202ENST00000487215 PCOTHQ58A44 107 aa10.62□□□□□ -0.71
SMPDL3A-202ENST00000487215 IGLV8-61A0A075B6I0 122 aa10.6□□□□□ -0.71
SMPDL3A-202ENST00000487215 A0A0J9YXY3 114 aa10.6□□□□□ -0.71
SMPDL3A-202ENST00000487215 E9PLD3 99 aa10.6□□□□□ -0.71
SMPDL3A-202ENST00000487215 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
SMPDL3A-202ENST00000487215 LORP23490 312 aaPredicted RBP10.59□□□□□ -0.71
SMPDL3A-202ENST00000487215 COLCA2A8K830 154 aa10.58□□□□□ -0.72
SMPDL3A-202ENST00000487215 NPC2P61916 151 aa10.57□□□□□ -0.72
SMPDL3A-202ENST00000487215 ADAMTSL4-AS1Q5T5F5 129 aa10.57□□□□□ -0.72
SMPDL3A-202ENST00000487215 KRTAP10-6P60371 365 aaPredicted RBP10.56□□□□□ -0.72
SMPDL3A-202ENST00000487215 SOSTDC1Q6X4U4 206 aa10.56□□□□□ -0.72
SMPDL3A-202ENST00000487215 SLC25A34Q6PIV7 304 aa10.55□□□□□ -0.72
SMPDL3A-202ENST00000487215 ST20-AS1Q8NBB2 130 aa10.55□□□□□ -0.72
SMPDL3A-202ENST00000487215 SPANXCQ9NY87 97 aa10.55□□□□□ -0.72
SMPDL3A-202ENST00000487215 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
SMPDL3A-202ENST00000487215 SYS1-DBNDD2H3BUS1 97 aa10.54□□□□□ -0.72
SMPDL3A-202ENST00000487215 TIMM17BO60830 172 aa10.53□□□□□ -0.72
SMPDL3A-202ENST00000487215 OR13C6PQ8NH95 151 aa10.53□□□□□ -0.72
SMPDL3A-202ENST00000487215 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.73
SMPDL3A-202ENST00000487215 LINC00308Q8TCZ7 52 aa10.52□□□□□ -0.73
SMPDL3A-202ENST00000487215 LIMD2Q9BT23 127 aa10.52□□□□□ -0.73
SMPDL3A-202ENST00000487215 DHRS4-AS1Q9P1J3 65 aa10.52□□□□□ -0.73
SMPDL3A-202ENST00000487215 HRCT1Q6UXD1 115 aa10.5□□□□□ -0.73
SMPDL3A-202ENST00000487215 SLC7A5P1Q8MH63 180 aa10.5□□□□□ -0.73
SMPDL3A-202ENST00000487215 SPANXDQ9BXN6 97 aa10.5□□□□□ -0.73
SMPDL3A-202ENST00000487215 PET117Q6UWS5 81 aa10.49□□□□□ -0.73
SMPDL3A-202ENST00000487215 LINC00518Q8N0U6 118 aa10.49□□□□□ -0.73
SMPDL3A-202ENST00000487215 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
SMPDL3A-202ENST00000487215 LITAFQ99732 161 aa10.48□□□□□ -0.73
SMPDL3A-202ENST00000487215 ZNF815PA8K554 130 aa10.47□□□□□ -0.73
SMPDL3A-202ENST00000487215 SPRR1BP22528 89 aa10.47□□□□□ -0.73
SMPDL3A-202ENST00000487215 LAMTOR3Q9UHA4 124 aa10.47□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BKO60814 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BJP06899 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BOP23527 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BBP33778 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BDP58876 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BCP62807 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST2H2BEQ16778 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BHQ93079 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BNQ99877 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 HIST1H2BMQ99879 126 aa10.46□□□□□ -0.73
SMPDL3A-202ENST00000487215 M0R2T5 61 aa10.44□□□□□ -0.74
SMPDL3A-202ENST00000487215 COPS9Q8WXC6 57 aa10.44□□□□□ -0.74
SMPDL3A-202ENST00000487215 COX7BP24311 80 aa10.43□□□□□ -0.74
SMPDL3A-202ENST00000487215 ELOF1P60002 83 aaKnown RBP10.42□□□□□ -0.74
SMPDL3A-202ENST00000487215 TAL2Q16559 108 aa10.4□□□□□ -0.74
SMPDL3A-202ENST00000487215 C6orf99Q4VX62 202 aa10.4□□□□□ -0.74
SMPDL3A-202ENST00000487215 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
SMPDL3A-202ENST00000487215 SCGB1D4Q6XE38 83 aa10.39□□□□□ -0.75
SMPDL3A-202ENST00000487215 FLGP20930 4061 aaPredicted RBP10.39□□□□□ -0.75
SMPDL3A-202ENST00000487215 CD164Q04900 197 aa10.38□□□□□ -0.75
SMPDL3A-202ENST00000487215 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
SMPDL3A-202ENST00000487215 C20orf202A1L168 122 aa10.37□□□□□ -0.75
SMPDL3A-202ENST00000487215 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
SMPDL3A-202ENST00000487215 COX6B2Q6YFQ2 88 aa10.37□□□□□ -0.75
SMPDL3A-202ENST00000487215 PRO1933Q9H354 126 aa10.37□□□□□ -0.75
SMPDL3A-202ENST00000487215 IFITM1P13164 125 aa10.36□□□□□ -0.75
SMPDL3A-202ENST00000487215 Q6ZVH6 145 aa10.36□□□□□ -0.75
SMPDL3A-202ENST00000487215 TTTY13Q9BZ97 58 aa10.36□□□□□ -0.75
SMPDL3A-202ENST00000487215 AKR1D1P51857 326 aa10.35□□□□□ -0.75
SMPDL3A-202ENST00000487215 KRTDAPP60985 99 aa10.35□□□□□ -0.75
SMPDL3A-202ENST00000487215 RPL37P61927 97 aaKnown RBP10.35□□□□□ -0.75
SMPDL3A-202ENST00000487215 DEFB105AQ8NG35 78 aa10.35□□□□□ -0.75
SMPDL3A-202ENST00000487215 A0A1B0GWB2 263 aa10.34□□□□□ -0.75
SMPDL3A-202ENST00000487215 H7C2G1 150 aa10.34□□□□□ -0.75
SMPDL3A-202ENST00000487215 Q1RN00 199 aa10.33□□□□□ -0.76
SMPDL3A-202ENST00000487215 COA6Q5JTJ3 125 aaKnown RBP10.33□□□□□ -0.76
SMPDL3A-202ENST00000487215 A4D1N5 150 aa10.32□□□□□ -0.76
SMPDL3A-202ENST00000487215 A6NDN8 102 aa10.31□□□□□ -0.76
SMPDL3A-202ENST00000487215 C1orf195Q5TG92 126 aa10.31□□□□□ -0.76
SMPDL3A-202ENST00000487215 Q5XG85 94 aa10.31□□□□□ -0.76
SMPDL3A-202ENST00000487215 NHP2Q9NX24 153 aaKnown RBP10.29□□□□□ -0.76
SMPDL3A-202ENST00000487215 IGLV5-48A0A075B6I7 105 aa10.27□□□□□ -0.77
SMPDL3A-202ENST00000487215 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
SMPDL3A-202ENST00000487215 LCE2BO14633 110 aa10.26□□□□□ -0.77
SMPDL3A-202ENST00000487215 ANKRD39Q53RE8 183 aa10.26□□□□□ -0.77
SMPDL3A-202ENST00000487215 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
SMPDL3A-202ENST00000487215 SNRPEP62304 92 aaKnown RBP10.25□□□□□ -0.77
SMPDL3A-202ENST00000487215 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
SMPDL3A-202ENST00000487215 A0A0G2JQZ4 141 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms