RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ERG28Q9UKR5 140 aa2.63□□□□□ -1.99
PTPN4-210ENST00000485247 CYSLTR1Q9Y271 337 aa2.63□□□□□ -1.99
PTPN4-210ENST00000485247 TRAV9-1A0A075B6T8 112 aa2.62□□□□□ -1.99
PTPN4-210ENST00000485247 IGIPA6NJ69 53 aa2.62□□□□□ -1.99
PTPN4-210ENST00000485247 C1orf195Q5TG92 126 aa2.62□□□□□ -1.99
PTPN4-210ENST00000485247 S100ZQ8WXG8 99 aa2.62□□□□□ -1.99
PTPN4-210ENST00000485247 Q9BRP9 147 aa2.62□□□□□ -1.99
PTPN4-210ENST00000485247 KCNQ1DNQ9H478 68 aa2.62□□□□□ -1.99
PTPN4-210ENST00000485247 FAM236DA0A1B0GTK5 79 aa2.61□□□□□ -1.99
PTPN4-210ENST00000485247 NCR3O14931 201 aa2.61□□□□□ -1.99
PTPN4-210ENST00000485247 FAM236CP0DP71 79 aa2.61□□□□□ -1.99
PTPN4-210ENST00000485247 CEBPGP53567 150 aa2.61□□□□□ -1.99
PTPN4-210ENST00000485247 COX17Q14061 63 aa2.61□□□□□ -1.99
PTPN4-210ENST00000485247 NAT8BQ9UHF3 227 aa2.61□□□□□ -1.99
PTPN4-210ENST00000485247 TRBV10-3A0A0K0K1G6 114 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 TINCRA0A1B0GVN0 87 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 SMLR1H3BR10 107 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 PPBPP02775 128 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 TMEM136Q6ZRR5 245 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 ORMDL3Q8N138 153 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 ST20-AS1Q8NBB2 130 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 PRELID3AQ96N28 172 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 BATF3Q9NR55 127 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 OSTCQ9NRP0 149 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 DHRS4-AS1Q9P1J3 65 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 V9GYV3 84 aa2.6□□□□□ -1.99
PTPN4-210ENST00000485247 KANTRA0A1W2PQU2 76 aa2.59□□□□□ -1.99
PTPN4-210ENST00000485247 HMSDA8MTL9 139 aa2.59□□□□□ -1.99
PTPN4-210ENST00000485247 LINC00158P58513 81 aa2.59□□□□□ -1.99
PTPN4-210ENST00000485247 FAM74A3Q4VXF1 159 aa2.59□□□□□ -1.99
PTPN4-210ENST00000485247 MRPL54Q6P161 138 aaKnown RBP2.59□□□□□ -1.99
PTPN4-210ENST00000485247 Q6ZRX8 168 aa2.59□□□□□ -1.99
PTPN4-210ENST00000485247 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
PTPN4-210ENST00000485247 MDN1Q9NU22 5596 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 A0A1B0GW15 77 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 F8W036 122 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 TAGLN2P37802 199 aaKnown RBP2.58□□□□□ -2
PTPN4-210ENST00000485247 S100A12P80511 92 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 ZNF345Q14585 488 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 ORMDL2Q53FV1 153 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 LINC00299Q6ZSB3 139 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 BOD1L2Q8IYS8 172 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 Q8N8P6 123 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 MAP1LC3AQ9H492 121 aa2.58□□□□□ -2
PTPN4-210ENST00000485247 A8MU10 97 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 TMEM250H0YL14 139 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 H3BRM9 83 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 ADCYAP1P18509 176 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 RPL23P62829 140 aaKnown RBP2.57□□□□□ -2
PTPN4-210ENST00000485247 CD164Q04900 197 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 PMVKQ15126 192 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 C6orf99Q4VX62 202 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 C10orf91Q5T1B1 145 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 Q5XG85 94 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 OBSCN-AS1Q96MR7 158 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 SMIM7Q9BQ49 75 aa2.57□□□□□ -2
PTPN4-210ENST00000485247 A0A0G2JQZ4 141 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 A6NN06 94 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 S100A8P05109 93 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 Q1RN00 199 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 ALKAL2Q6UX46 152 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 PCP2Q8IVA1 136 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 SCGB3A1Q96QR1 104 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 CST9LQ9H4G1 147 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 LAMTOR3Q9UHA4 124 aa2.56□□□□□ -2
PTPN4-210ENST00000485247 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
PTPN4-210ENST00000485247 A0A1B0GXF2 115 aa2.55□□□□□ -2
PTPN4-210ENST00000485247 JOSD1Q15040 202 aaPredicted RBP2.55□□□□□ -2
PTPN4-210ENST00000485247 SLC25A34Q6PIV7 304 aa2.55□□□□□ -2
PTPN4-210ENST00000485247 Q6ZVH6 145 aa2.55□□□□□ -2
PTPN4-210ENST00000485247 TOMM6Q96B49 74 aa2.55□□□□□ -2
PTPN4-210ENST00000485247 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
PTPN4-210ENST00000485247 SPRR1BP22528 89 aa2.54□□□□□ -2
PTPN4-210ENST00000485247 G0S2P27469 103 aa2.54□□□□□ -2
PTPN4-210ENST00000485247 DDTP30046 118 aa2.54□□□□□ -2
PTPN4-210ENST00000485247 PRO1933Q9H354 126 aa2.54□□□□□ -2
PTPN4-210ENST00000485247 LAMTOR2Q9Y2Q5 125 aa2.54□□□□□ -2
PTPN4-210ENST00000485247 LOC107984156A0A0G2JMH3 177 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 K7EMI3 77 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 SMIM13P0DJ93 91 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 ZNF22P17026 224 aaPredicted RBP2.53□□□□□ -2
PTPN4-210ENST00000485247 AKR1D1P51857 326 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 SFTA2Q6UW10 78 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 ARL17AQ8IVW1 177 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 Q96NJ1 140 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 RBM12B-AS1Q9P1G2 102 aa2.53□□□□□ -2
PTPN4-210ENST00000485247 TCL1BO95988 128 aa2.52□□□□□ -2.01
PTPN4-210ENST00000485247 IGLC3P0DOY3 106 aa2.52□□□□□ -2.01
PTPN4-210ENST00000485247 SPRR2EP22531 72 aa2.52□□□□□ -2.01
PTPN4-210ENST00000485247 SPRR2BP35325 72 aa2.52□□□□□ -2.01
PTPN4-210ENST00000485247 SPRR2AP35326 72 aa2.52□□□□□ -2.01
PTPN4-210ENST00000485247 ADIRFQ15847 76 aa2.52□□□□□ -2.01
PTPN4-210ENST00000485247 MIR7-3HGQ8N6C7 128 aa2.52□□□□□ -2.01
PTPN4-210ENST00000485247 NXT2Q9NPJ8 142 aaKnown RBP2.52□□□□□ -2.01
PTPN4-210ENST00000485247 CXCL6P80162 114 aa2.51□□□□□ -2.01
PTPN4-210ENST00000485247 MEIG1Q5JSS6 88 aa2.51□□□□□ -2.01
PTPN4-210ENST00000485247 S100A7L2Q5SY68 101 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms