RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
MRPL28-210ENST00000483764 RTL8CO15255 209 aa11.13□□□□□ -0.63
MRPL28-210ENST00000483764 CNBPP62633 177 aaKnown RBP11.13□□□□□ -0.63
MRPL28-210ENST00000483764 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
MRPL28-210ENST00000483764 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.12□□□□□ -0.63
MRPL28-210ENST00000483764 TRAV23DV6A0A075B6W5 121 aa11.12□□□□□ -0.63
MRPL28-210ENST00000483764 NDUFV3P56181 108 aaKnown RBP11.12□□□□□ -0.63
MRPL28-210ENST00000483764 RPL18AQ02543 176 aaKnown RBP11.12□□□□□ -0.63
MRPL28-210ENST00000483764 PDE6GP18545 87 aa11.11□□□□□ -0.63
MRPL28-210ENST00000483764 CCKP06307 115 aa11.1□□□□□ -0.63
MRPL28-210ENST00000483764 TLX1NBP0CAT3 122 aa11.1□□□□□ -0.63
MRPL28-210ENST00000483764 VPREB1P12018 145 aa11.09□□□□□ -0.63
MRPL28-210ENST00000483764 TNP2Q05952 138 aa11.09□□□□□ -0.63
MRPL28-210ENST00000483764 Q8NDZ9 215 aa11.09□□□□□ -0.63
MRPL28-210ENST00000483764 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
MRPL28-210ENST00000483764 C14orf132Q9NPU4 83 aa11.09□□□□□ -0.63
MRPL28-210ENST00000483764 DNAH17Q9UFH2 4485 aa11.08□□□□□ -0.64
MRPL28-210ENST00000483764 ZNF73O43830 326 aaPredicted RBP11.08□□□□□ -0.64
MRPL28-210ENST00000483764 PLA2G2DQ9UNK4 145 aa11.08□□□□□ -0.64
MRPL28-210ENST00000483764 RYR3Q15413 4870 aa11.08□□□□□ -0.64
MRPL28-210ENST00000483764 TRBV10-3A0A0K0K1G6 114 aa11.07□□□□□ -0.64
MRPL28-210ENST00000483764 COX7BP24311 80 aa11.07□□□□□ -0.64
MRPL28-210ENST00000483764 ATP5EP2Q5VTU8 51 aa11.06□□□□□ -0.64
MRPL28-210ENST00000483764 Q6JHZ5 121 aa11.06□□□□□ -0.64
MRPL28-210ENST00000483764 ELOF1P60002 83 aaKnown RBP11.05□□□□□ -0.64
MRPL28-210ENST00000483764 XAGE1AQ9HD64 81 aa11.05□□□□□ -0.64
MRPL28-210ENST00000483764 LOC110117498A0A087WWA1 95 aa11.04□□□□□ -0.64
MRPL28-210ENST00000483764 Q6ZRP5 223 aa11.04□□□□□ -0.64
MRPL28-210ENST00000483764 RYR2Q92736 4967 aa11.04□□□□□ -0.64
MRPL28-210ENST00000483764 C9orf163Q8N9P6 203 aa11.04□□□□□ -0.64
MRPL28-210ENST00000483764 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
MRPL28-210ENST00000483764 LOC107984640A0A0U1RRK4 108 aa11.03□□□□□ -0.64
MRPL28-210ENST00000483764 RBM3P98179 157 aaKnown RBP11.03□□□□□ -0.64
MRPL28-210ENST00000483764 FRAS1Q86XX4 4008 aa11.02□□□□□ -0.65
MRPL28-210ENST00000483764 IGLV5-37A0A075B6J1 123 aa11□□□□□ -0.65
MRPL28-210ENST00000483764 C9orf129Q5T035 196 aaKnown RBP10.99□□□□□ -0.65
MRPL28-210ENST00000483764 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
MRPL28-210ENST00000483764 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
MRPL28-210ENST00000483764 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
MRPL28-210ENST00000483764 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
MRPL28-210ENST00000483764 IGLV5-52A0A0A0MRZ9 124 aa10.98□□□□□ -0.65
MRPL28-210ENST00000483764 Q6ZQY7 126 aa10.98□□□□□ -0.65
MRPL28-210ENST00000483764 DSCR8Q96T75 97 aa10.98□□□□□ -0.65
MRPL28-210ENST00000483764 KCNQ1DNQ9H478 68 aa10.98□□□□□ -0.65
MRPL28-210ENST00000483764 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
MRPL28-210ENST00000483764 LAMTOR3Q9UHA4 124 aa10.98□□□□□ -0.65
MRPL28-210ENST00000483764 C16orf90A8MZG2 172 aa10.96□□□□□ -0.65
MRPL28-210ENST00000483764 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
MRPL28-210ENST00000483764 UBL5Q9BZL1 73 aa10.96□□□□□ -0.65
MRPL28-210ENST00000483764 FAT2Q9NYQ8 4349 aa10.96□□□□□ -0.66
MRPL28-210ENST00000483764 A0A096LNI7 61 aa10.95□□□□□ -0.66
MRPL28-210ENST00000483764 Q6ZQT0 140 aa10.95□□□□□ -0.66
MRPL28-210ENST00000483764 KRTAP10-2P60368 255 aa10.94□□□□□ -0.66
MRPL28-210ENST00000483764 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
MRPL28-210ENST00000483764 FAM236AA0A1B0GUQ0 79 aa10.94□□□□□ -0.66
MRPL28-210ENST00000483764 FAM236BA0A1B0GV22 79 aa10.94□□□□□ -0.66
MRPL28-210ENST00000483764 PRYO14603 147 aa10.94□□□□□ -0.66
MRPL28-210ENST00000483764 DNAH11Q96DT5 4516 aa10.93□□□□□ -0.66
MRPL28-210ENST00000483764 HECTD4Q9Y4D8 3996 aa10.92□□□□□ -0.66
MRPL28-210ENST00000483764 ATOX1O00244 68 aa10.92□□□□□ -0.66
MRPL28-210ENST00000483764 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
MRPL28-210ENST00000483764 HIST1H4AP62805 103 aaKnown RBP10.91□□□□□ -0.66
MRPL28-210ENST00000483764 CHTF8P0CG12 524 aa10.9□□□□□ -0.66
MRPL28-210ENST00000483764 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
MRPL28-210ENST00000483764 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
MRPL28-210ENST00000483764 FAM168BA1KXE4 195 aa10.89□□□□□ -0.67
MRPL28-210ENST00000483764 SERTAD4-AS1Q5TG53 156 aa10.89□□□□□ -0.67
MRPL28-210ENST00000483764 C7orf33Q8WU49 177 aa10.89□□□□□ -0.67
MRPL28-210ENST00000483764 PKD1P98161 4303 aa10.87□□□□□ -0.67
MRPL28-210ENST00000483764 A0A1B0GW54 56 aa10.87□□□□□ -0.67
MRPL28-210ENST00000483764 PANO1I0J062 215 aa10.86□□□□□ -0.67
MRPL28-210ENST00000483764 KRTAP7-1Q8IUC3 87 aa10.86□□□□□ -0.67
MRPL28-210ENST00000483764 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
MRPL28-210ENST00000483764 A0A1W2PNN7 141 aa10.85□□□□□ -0.67
MRPL28-210ENST00000483764 SPRR1AP35321 89 aa10.85□□□□□ -0.67
MRPL28-210ENST00000483764 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
MRPL28-210ENST00000483764 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.85□□□□□ -0.67
MRPL28-210ENST00000483764 IGLV1-50A0A075B6I6 118 aa10.84□□□□□ -0.67
MRPL28-210ENST00000483764 UQCRQO14949 82 aa10.84□□□□□ -0.67
MRPL28-210ENST00000483764 SPACA4Q8TDM5 124 aa10.84□□□□□ -0.67
MRPL28-210ENST00000483764 A0A1B0GVY2 172 aa10.84□□□□□ -0.67
MRPL28-210ENST00000483764 BCE1O60756 84 aa10.84□□□□□ -0.67
MRPL28-210ENST00000483764 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
MRPL28-210ENST00000483764 CXCL6P80162 114 aa10.83□□□□□ -0.68
MRPL28-210ENST00000483764 Q6ZRX8 168 aa10.83□□□□□ -0.68
MRPL28-210ENST00000483764 DNAH5Q8TE73 4624 aa10.82□□□□□ -0.68
MRPL28-210ENST00000483764 ETDCA0A1B0GVM5 59 aa10.82□□□□□ -0.68
MRPL28-210ENST00000483764 MRPL55Q7Z7F7 128 aaKnown RBP10.81□□□□□ -0.68
MRPL28-210ENST00000483764 KRTAP10-1P60331 282 aa10.8□□□□□ -0.68
MRPL28-210ENST00000483764 C3orf22Q8N5N4 141 aa10.8□□□□□ -0.68
MRPL28-210ENST00000483764 B5MCH6 92 aa10.79□□□□□ -0.68
MRPL28-210ENST00000483764 KRTAP4-16G5E9R7 235 aaPredicted RBP10.79□□□□□ -0.68
MRPL28-210ENST00000483764 CCDC179H3BU77 68 aa10.79□□□□□ -0.68
MRPL28-210ENST00000483764 COX7CP15954 63 aa10.79□□□□□ -0.68
MRPL28-210ENST00000483764 EPM2AB3EWF7 344 aa10.77□□□□□ -0.69
MRPL28-210ENST00000483764 FAM30AQ9NZY2 134 aa10.77□□□□□ -0.69
MRPL28-210ENST00000483764 IGLV5-48A0A075B6I7 105 aa10.76□□□□□ -0.69
MRPL28-210ENST00000483764 Q6ZVQ6 151 aa10.76□□□□□ -0.69
MRPL28-210ENST00000483764 SMIM20Q8N5G0 67 aa10.76□□□□□ -0.69
MRPL28-210ENST00000483764 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms