RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 HIST3H2BBQ8N257 126 aa7.81□□□□□ -1.16
VARS-226ENST00000483275 SMCR5Q8TEV8 140 aa7.81□□□□□ -1.16
VARS-226ENST00000483275 PRYO14603 147 aa7.8□□□□□ -1.16
VARS-226ENST00000483275 NPC2P61916 151 aa7.8□□□□□ -1.16
VARS-226ENST00000483275 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
VARS-226ENST00000483275 LOC107984156A0A0G2JMH3 177 aa7.79□□□□□ -1.16
VARS-226ENST00000483275 LINC01547P58512 204 aaPredicted RBP7.79□□□□□ -1.16
VARS-226ENST00000483275 MOBPQ13875 183 aa7.79□□□□□ -1.16
VARS-226ENST00000483275 ARL17AQ8IVW1 177 aa7.79□□□□□ -1.16
VARS-226ENST00000483275 ATOH7Q8N100 152 aa7.79□□□□□ -1.16
VARS-226ENST00000483275 HIST1H2BLQ99880 126 aa7.79□□□□□ -1.16
VARS-226ENST00000483275 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
VARS-226ENST00000483275 ETDCA0A1B0GVM5 59 aa7.78□□□□□ -1.16
VARS-226ENST00000483275 TIMM17BO60830 172 aa7.78□□□□□ -1.16
VARS-226ENST00000483275 SNRPEP62304 92 aaKnown RBP7.78□□□□□ -1.16
VARS-226ENST00000483275 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
VARS-226ENST00000483275 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
VARS-226ENST00000483275 SCGB1D4Q6XE38 83 aa7.78□□□□□ -1.16
VARS-226ENST00000483275 SPANXB1Q9NS25 103 aaPredicted RBP7.78□□□□□ -1.16
VARS-226ENST00000483275 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
VARS-226ENST00000483275 HSBP1L1C9JCN9 74 aa7.77□□□□□ -1.17
VARS-226ENST00000483275 KRTAP4-16G5E9R7 235 aaPredicted RBP7.77□□□□□ -1.17
VARS-226ENST00000483275 ERC2-IT1O76042 136 aa7.77□□□□□ -1.17
VARS-226ENST00000483275 NDUFC2O95298 119 aa7.77□□□□□ -1.17
VARS-226ENST00000483275 DDTP30046 118 aa7.77□□□□□ -1.17
VARS-226ENST00000483275 SPRR1AP35321 89 aa7.77□□□□□ -1.17
VARS-226ENST00000483275 ADAMTSL4-AS1Q5T5F5 129 aa7.76□□□□□ -1.17
VARS-226ENST00000483275 KCNQ1DNQ9H478 68 aa7.76□□□□□ -1.17
VARS-226ENST00000483275 SPINK1P00995 79 aa7.75□□□□□ -1.17
VARS-226ENST00000483275 LINC00483Q53H64 154 aa7.75□□□□□ -1.17
VARS-226ENST00000483275 ANKRD39Q53RE8 183 aa7.75□□□□□ -1.17
VARS-226ENST00000483275 Q8N377 158 aa7.75□□□□□ -1.17
VARS-226ENST00000483275 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
VARS-226ENST00000483275 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
VARS-226ENST00000483275 LINC00308Q8TCZ7 52 aa7.74□□□□□ -1.17
VARS-226ENST00000483275 COPS9Q8WXC6 57 aa7.74□□□□□ -1.17
VARS-226ENST00000483275 CBY1Q9Y3M2 126 aa7.74□□□□□ -1.17
VARS-226ENST00000483275 SCGB1D1O95968 90 aa7.73□□□□□ -1.17
VARS-226ENST00000483275 SOSTDC1Q6X4U4 206 aa7.73□□□□□ -1.17
VARS-226ENST00000483275 SPANXCQ9NY87 97 aa7.73□□□□□ -1.17
VARS-226ENST00000483275 B5MCH6 92 aa7.72□□□□□ -1.17
VARS-226ENST00000483275 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
VARS-226ENST00000483275 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
VARS-226ENST00000483275 LITAFQ99732 161 aa7.72□□□□□ -1.17
VARS-226ENST00000483275 Q9BRP9 147 aa7.72□□□□□ -1.17
VARS-226ENST00000483275 C5orf52A6NGY3 159 aa7.71□□□□□ -1.18
VARS-226ENST00000483275 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
VARS-226ENST00000483275 HINT1P49773 126 aaPredicted RBP7.7□□□□□ -1.18
VARS-226ENST00000483275 XP32Q5T750 250 aa7.7□□□□□ -1.18
VARS-226ENST00000483275 Q6ZVH6 145 aa7.7□□□□□ -1.18
VARS-226ENST00000483275 PCP2Q8IVA1 136 aa7.7□□□□□ -1.18
VARS-226ENST00000483275 SPANXDQ9BXN6 97 aa7.7□□□□□ -1.18
VARS-226ENST00000483275 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
VARS-226ENST00000483275 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
VARS-226ENST00000483275 IFITM1P13164 125 aa7.69□□□□□ -1.18
VARS-226ENST00000483275 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
VARS-226ENST00000483275 LINC00518Q8N0U6 118 aa7.69□□□□□ -1.18
VARS-226ENST00000483275 CRCT1Q9UGL9 99 aa7.69□□□□□ -1.18
VARS-226ENST00000483275 JOSD1Q15040 202 aaPredicted RBP7.68□□□□□ -1.18
VARS-226ENST00000483275 C9orf153Q5TBE3 101 aa7.68□□□□□ -1.18
VARS-226ENST00000483275 SLC25A20O43772 301 aa7.67□□□□□ -1.18
VARS-226ENST00000483275 Q6ZRX8 168 aa7.67□□□□□ -1.18
VARS-226ENST00000483275 ZNF73O43830 326 aaPredicted RBP7.66□□□□□ -1.18
VARS-226ENST00000483275 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.18
VARS-226ENST00000483275 KRTAP19-2Q3LHN2 52 aa7.65□□□□□ -1.18
VARS-226ENST00000483275 SSBP3-AS1Q7Z2R9 100 aa7.65□□□□□ -1.18
VARS-226ENST00000483275 MUSTN1Q8IVN3 82 aa7.65□□□□□ -1.18
VARS-226ENST00000483275 ST20-AS1Q8NBB2 130 aa7.65□□□□□ -1.18
VARS-226ENST00000483275 A6NDN8 102 aa7.62□□□□□ -1.19
VARS-226ENST00000483275 HRCT1Q6UXD1 115 aa7.62□□□□□ -1.19
VARS-226ENST00000483275 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
VARS-226ENST00000483275 MT1HP80294 61 aa7.61□□□□□ -1.19
VARS-226ENST00000483275 PCOTHQ58A44 107 aa7.61□□□□□ -1.19
VARS-226ENST00000483275 TRAV13-2A0A0B4J235 113 aa7.6□□□□□ -1.19
VARS-226ENST00000483275 COX8AP10176 69 aa7.59□□□□□ -1.19
VARS-226ENST00000483275 COX7BP24311 80 aa7.59□□□□□ -1.19
VARS-226ENST00000483275 VAMP8Q9BV40 100 aa7.59□□□□□ -1.19
VARS-226ENST00000483275 IGLV8-61A0A075B6I0 122 aa7.58□□□□□ -1.2
VARS-226ENST00000483275 C6orf99Q4VX62 202 aa7.58□□□□□ -1.2
VARS-226ENST00000483275 SPATA45Q537H7 98 aa7.58□□□□□ -1.2
VARS-226ENST00000483275 DHRS4-AS1Q9P1J3 65 aa7.58□□□□□ -1.2
VARS-226ENST00000483275 PAM16Q9Y3D7 125 aa7.58□□□□□ -1.2
VARS-226ENST00000483275 HIST1H4GQ99525 98 aa7.57□□□□□ -1.2
VARS-226ENST00000483275 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
VARS-226ENST00000483275 DLEU1O43261 78 aa7.55□□□□□ -1.2
VARS-226ENST00000483275 ELOF1P60002 83 aaKnown RBP7.55□□□□□ -1.2
VARS-226ENST00000483275 C14orf144Q96I85 54 aa7.55□□□□□ -1.2
VARS-226ENST00000483275 TRBV7-6A0A0J9YX20 115 aa7.54□□□□□ -1.2
VARS-226ENST00000483275 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
VARS-226ENST00000483275 A4D1N5 150 aa7.54□□□□□ -1.2
VARS-226ENST00000483275 SLC25A34Q6PIV7 304 aa7.53□□□□□ -1.2
VARS-226ENST00000483275 VAMP3Q15836 100 aa7.52□□□□□ -1.21
VARS-226ENST00000483275 H7C2G1 150 aa7.51□□□□□ -1.21
VARS-226ENST00000483275 TAL2Q16559 108 aa7.51□□□□□ -1.21
VARS-226ENST00000483275 SMIM11BQ8TCY0 68 aa7.51□□□□□ -1.21
VARS-226ENST00000483275 LIMD2Q9BT23 127 aa7.51□□□□□ -1.21
VARS-226ENST00000483275 NHP2Q9NX24 153 aaKnown RBP7.51□□□□□ -1.21
VARS-226ENST00000483275 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
VARS-226ENST00000483275 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
VARS-226ENST00000483275 Q1RN00 199 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms