RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
COL17A1-205ENST00000480127 SCGB1D4Q6XE38 83 aa4.04□□□□□ -1.76
COL17A1-205ENST00000480127 SSBP3-AS1Q7Z2R9 100 aa4.04□□□□□ -1.76
COL17A1-205ENST00000480127 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 NDUFC2O95298 119 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 SPRR1AP35321 89 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 HRCT1Q6UXD1 115 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 COPS9Q8WXC6 57 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 YPEL4Q96NS1 127 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 LIMD2Q9BT23 127 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 LAMTOR3Q9UHA4 124 aa4.03□□□□□ -1.76
COL17A1-205ENST00000480127 A0A0J9YXY3 114 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 C20orf202A1L168 122 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 ERC2-IT1O76042 136 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 LINC01547P58512 204 aaPredicted RBP4.02□□□□□ -1.77
COL17A1-205ENST00000480127 TAL2Q16559 108 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 DEFB105AQ8NG35 78 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 SPANXCQ9NY87 97 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 DHRS4-AS1Q9P1J3 65 aa4.02□□□□□ -1.77
COL17A1-205ENST00000480127 E9PLD3 99 aa4.01□□□□□ -1.77
COL17A1-205ENST00000480127 SYS1-DBNDD2H3BUS1 97 aa4.01□□□□□ -1.77
COL17A1-205ENST00000480127 IGLV6-57P01721 117 aa4.01□□□□□ -1.77
COL17A1-205ENST00000480127 KRTDAPP60985 99 aa4.01□□□□□ -1.77
COL17A1-205ENST00000480127 SLC7A5P1Q8MH63 180 aa4.01□□□□□ -1.77
COL17A1-205ENST00000480127 Q9BRP9 147 aa4.01□□□□□ -1.77
COL17A1-205ENST00000480127 A6NDN8 102 aa4□□□□□ -1.77
COL17A1-205ENST00000480127 KRTAP4-16G5E9R7 235 aaPredicted RBP4□□□□□ -1.77
COL17A1-205ENST00000480127 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
COL17A1-205ENST00000480127 COX7BP24311 80 aa4□□□□□ -1.77
COL17A1-205ENST00000480127 LINC00518Q8N0U6 118 aa4□□□□□ -1.77
COL17A1-205ENST00000480127 ST20-AS1Q8NBB2 130 aa4□□□□□ -1.77
COL17A1-205ENST00000480127 LINC00308Q8TCZ7 52 aa4□□□□□ -1.77
COL17A1-205ENST00000480127 SPANXDQ9BXN6 97 aa4□□□□□ -1.77
COL17A1-205ENST00000480127 LOC107984156A0A0G2JMH3 177 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 LINC00310P59036 64 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 RPS29P62273 56 aaKnown RBP3.99□□□□□ -1.77
COL17A1-205ENST00000480127 Q1RN00 199 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 KRTAP13-3Q3SY46 172 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 ADAMTSL4-AS1Q5T5F5 129 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 PET117Q6UWS5 81 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 ARL17AQ8IVW1 177 aa3.99□□□□□ -1.77
COL17A1-205ENST00000480127 COLCA2A8K830 154 aa3.98□□□□□ -1.77
COL17A1-205ENST00000480127 F8WEM9 126 aa3.98□□□□□ -1.77
COL17A1-205ENST00000480127 TIMM17BO60830 172 aa3.98□□□□□ -1.77
COL17A1-205ENST00000480127 Q8N377 158 aa3.98□□□□□ -1.77
COL17A1-205ENST00000480127 C9orf92A6NGG3 77 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 C5orf52A6NGY3 159 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 H7C2G1 150 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BKO60814 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BJP06899 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BOP23527 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BBP33778 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BDP58876 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BCP62807 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST2H2BEQ16778 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 C6orf99Q4VX62 202 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.97□□□□□ -1.77
COL17A1-205ENST00000480127 SOSTDC1Q6X4U4 206 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BHQ93079 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BNQ99877 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HIST1H2BMQ99879 126 aa3.97□□□□□ -1.77
COL17A1-205ENST00000480127 HSBP1L1C9JCN9 74 aa3.96□□□□□ -1.78
COL17A1-205ENST00000480127 AKR1D1P51857 326 aa3.96□□□□□ -1.78
COL17A1-205ENST00000480127 LINC01545Q5VT33 79 aa3.96□□□□□ -1.78
COL17A1-205ENST00000480127 PRO1933Q9H354 126 aa3.96□□□□□ -1.78
COL17A1-205ENST00000480127 NHP2Q9NX24 153 aaKnown RBP3.96□□□□□ -1.78
COL17A1-205ENST00000480127 TEX49A0A1B0GTD5 131 aa3.95□□□□□ -1.78
COL17A1-205ENST00000480127 EIF4EBP3O60516 100 aaPredicted RBP3.95□□□□□ -1.78
COL17A1-205ENST00000480127 VAMP3Q15836 100 aa3.95□□□□□ -1.78
COL17A1-205ENST00000480127 ATOH7Q8N100 152 aa3.95□□□□□ -1.78
COL17A1-205ENST00000480127 TTTY13Q9BZ97 58 aa3.95□□□□□ -1.78
COL17A1-205ENST00000480127 A0A1B0GWB2 263 aa3.94□□□□□ -1.78
COL17A1-205ENST00000480127 C3orf79P0CE67 100 aa3.94□□□□□ -1.78
COL17A1-205ENST00000480127 IFITM1P13164 125 aa3.94□□□□□ -1.78
COL17A1-205ENST00000480127 S100A2P29034 98 aa3.94□□□□□ -1.78
COL17A1-205ENST00000480127 ELOF1P60002 83 aaKnown RBP3.94□□□□□ -1.78
COL17A1-205ENST00000480127 TRAV13-2A0A0B4J235 113 aa3.93□□□□□ -1.78
COL17A1-205ENST00000480127 TCL1BO95988 128 aa3.93□□□□□ -1.78
COL17A1-205ENST00000480127 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
COL17A1-205ENST00000480127 IGLV8-61A0A075B6I0 122 aa3.92□□□□□ -1.78
COL17A1-205ENST00000480127 A4D1N5 150 aa3.92□□□□□ -1.78
COL17A1-205ENST00000480127 XP32Q5T750 250 aa3.92□□□□□ -1.78
COL17A1-205ENST00000480127 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
COL17A1-205ENST00000480127 Q6ZVH6 145 aa3.92□□□□□ -1.78
COL17A1-205ENST00000480127 LITAFQ99732 161 aa3.92□□□□□ -1.78
COL17A1-205ENST00000480127 TRBV7-6A0A0J9YX20 115 aa3.91□□□□□ -1.78
COL17A1-205ENST00000480127 SNCGO76070 127 aa3.91□□□□□ -1.78
COL17A1-205ENST00000480127 SPRR1BP22528 89 aa3.91□□□□□ -1.78
COL17A1-205ENST00000480127 MT1HP80294 61 aa3.91□□□□□ -1.78
COL17A1-205ENST00000480127 PCOTHQ58A44 107 aa3.91□□□□□ -1.78
COL17A1-205ENST00000480127 MUSTN1Q8IVN3 82 aa3.91□□□□□ -1.78
COL17A1-205ENST00000480127 M0R2T5 61 aa3.9□□□□□ -1.79
COL17A1-205ENST00000480127 S100A6P06703 90 aa3.9□□□□□ -1.79
COL17A1-205ENST00000480127 CD164Q04900 197 aa3.9□□□□□ -1.79
COL17A1-205ENST00000480127 ANKRD39Q53RE8 183 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms