RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PDE6GP18545 87 aa8.84□□□□□ -1
PDZRN3-208ENST00000479530 COX7BP24311 80 aa8.83□□□□□ -1
PDZRN3-208ENST00000479530 NOTCH1P46531 2555 aa8.83□□□□□ -1
PDZRN3-208ENST00000479530 KRTAP10-11P60412 298 aa8.83□□□□□ -1
PDZRN3-208ENST00000479530 PRR34Q9NV39 138 aa8.83□□□□□ -1
PDZRN3-208ENST00000479530 ELOF1P60002 83 aaKnown RBP8.82□□□□□ -1
PDZRN3-208ENST00000479530 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
PDZRN3-208ENST00000479530 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
PDZRN3-208ENST00000479530 WFDC10BQ8IUB3 73 aa8.82□□□□□ -1
PDZRN3-208ENST00000479530 LINC00474Q9P2X8 69 aa8.81□□□□□ -1
PDZRN3-208ENST00000479530 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
PDZRN3-208ENST00000479530 NREPQ16612 68 aa8.8□□□□□ -1
PDZRN3-208ENST00000479530 VPREB1P12018 145 aa8.79□□□□□ -1
PDZRN3-208ENST00000479530 BPY2O14599 106 aa8.79□□□□□ -1
PDZRN3-208ENST00000479530 Q6ZTC4 211 aa8.78□□□□□ -1
PDZRN3-208ENST00000479530 TRBV7-6A0A0J9YX20 115 aa8.78□□□□□ -1
PDZRN3-208ENST00000479530 TMEM254Q8TBM7 123 aa8.77□□□□□ -1.01
PDZRN3-208ENST00000479530 KPRPQ5T749 579 aaPredicted RBP8.77□□□□□ -1.01
PDZRN3-208ENST00000479530 LINC00528Q8N1L1 170 aa8.76□□□□□ -1.01
PDZRN3-208ENST00000479530 H3BQ85 93 aa8.76□□□□□ -1.01
PDZRN3-208ENST00000479530 CAMK2N2Q96S95 79 aa8.76□□□□□ -1.01
PDZRN3-208ENST00000479530 C3orf84H3BNL1 204 aa8.75□□□□□ -1.01
PDZRN3-208ENST00000479530 IGKV4-1P06312 121 aa8.75□□□□□ -1.01
PDZRN3-208ENST00000479530 Q6ZRU5 148 aa8.75□□□□□ -1.01
PDZRN3-208ENST00000479530 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
PDZRN3-208ENST00000479530 ESRGQ1W209 222 aa8.73□□□□□ -1.01
PDZRN3-208ENST00000479530 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
PDZRN3-208ENST00000479530 M0R378 163 aa8.72□□□□□ -1.01
PDZRN3-208ENST00000479530 DEFB105AQ8NG35 78 aa8.72□□□□□ -1.01
PDZRN3-208ENST00000479530 NDUFC1O43677 76 aa8.72□□□□□ -1.01
PDZRN3-208ENST00000479530 OCR1Q9BZK8 76 aa8.72□□□□□ -1.01
PDZRN3-208ENST00000479530 Q6ZRP5 223 aa8.71□□□□□ -1.01
PDZRN3-208ENST00000479530 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.02
PDZRN3-208ENST00000479530 C15orf56Q8N910 161 aa8.71□□□□□ -1.02
PDZRN3-208ENST00000479530 EGFEM1PQ0D2K5 195 aa8.69□□□□□ -1.02
PDZRN3-208ENST00000479530 KRTAP24-1Q3LI83 254 aa8.69□□□□□ -1.02
PDZRN3-208ENST00000479530 COL6A5A8TX70 2615 aa8.69□□□□□ -1.02
PDZRN3-208ENST00000479530 HIGD2AQ9BW72 106 aa8.69□□□□□ -1.02
PDZRN3-208ENST00000479530 PRB2P02812 416 aaPredicted RBP8.68□□□□□ -1.02
PDZRN3-208ENST00000479530 DNAH3Q8TD57 4116 aa8.68□□□□□ -1.02
PDZRN3-208ENST00000479530 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
PDZRN3-208ENST00000479530 PRYO14603 147 aa8.67□□□□□ -1.02
PDZRN3-208ENST00000479530 Q8N377 158 aa8.67□□□□□ -1.02
PDZRN3-208ENST00000479530 ERC2-IT1O76042 136 aa8.66□□□□□ -1.02
PDZRN3-208ENST00000479530 SERTAD4-AS1Q5TG53 156 aa8.66□□□□□ -1.02
PDZRN3-208ENST00000479530 PMAIP1Q13794 54 aa8.65□□□□□ -1.02
PDZRN3-208ENST00000479530 IGKV2D-24A0A075B6R9 120 aa8.64□□□□□ -1.03
PDZRN3-208ENST00000479530 DEFB131BA0A096LNP1 70 aa8.64□□□□□ -1.03
PDZRN3-208ENST00000479530 ATP5EP56381 51 aaPredicted RBP8.64□□□□□ -1.03
PDZRN3-208ENST00000479530 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
PDZRN3-208ENST00000479530 BAHCC1Q9P281 2608 aa8.64□□□□□ -1.03
PDZRN3-208ENST00000479530 SMIM29Q86T20 159 aa8.64□□□□□ -1.03
PDZRN3-208ENST00000479530 LYSTQ99698 3801 aa8.63□□□□□ -1.03
PDZRN3-208ENST00000479530 C7orf33Q8WU49 177 aa8.62□□□□□ -1.03
PDZRN3-208ENST00000479530 A0A1W2PNM2 257 aa8.62□□□□□ -1.03
PDZRN3-208ENST00000479530 H3BNG1 76 aa8.62□□□□□ -1.03
PDZRN3-208ENST00000479530 FUSP35637 526 aaKnown RBP eCLIP8.62□□□□□ -1.03
PDZRN3-208ENST00000479530 HUWE1Q7Z6Z7 4374 aaKnown RBP8.62□□□□□ -1.03
PDZRN3-208ENST00000479530 CASC10Q5T4H9 136 aa8.61□□□□□ -1.03
PDZRN3-208ENST00000479530 C11orf45Q8TAV5 145 aa8.61□□□□□ -1.03
PDZRN3-208ENST00000479530 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
PDZRN3-208ENST00000479530 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
PDZRN3-208ENST00000479530 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
PDZRN3-208ENST00000479530 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
PDZRN3-208ENST00000479530 ST20-AS1Q8NBB2 130 aa8.6□□□□□ -1.03
PDZRN3-208ENST00000479530 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
PDZRN3-208ENST00000479530 NKAPP1Q8N9T2 125 aa8.6□□□□□ -1.03
PDZRN3-208ENST00000479530 Q9BRP9 147 aa8.6□□□□□ -1.03
PDZRN3-208ENST00000479530 FAM168BA1KXE4 195 aa8.59□□□□□ -1.03
PDZRN3-208ENST00000479530 SYCNQ0VAF6 134 aa8.58□□□□□ -1.04
PDZRN3-208ENST00000479530 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
PDZRN3-208ENST00000479530 LRCOL1A6NCL2 159 aa8.58□□□□□ -1.04
PDZRN3-208ENST00000479530 LINC01556Q5JQF7 62 aa8.58□□□□□ -1.04
PDZRN3-208ENST00000479530 MGAM2Q2M2H8 2515 aa8.58□□□□□ -1.04
PDZRN3-208ENST00000479530 CSMD3Q7Z407 3707 aa8.58□□□□□ -1.04
PDZRN3-208ENST00000479530 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
PDZRN3-208ENST00000479530 Q6ZRX8 168 aa8.56□□□□□ -1.04
PDZRN3-208ENST00000479530 TNP2Q05952 138 aa8.55□□□□□ -1.04
PDZRN3-208ENST00000479530 A0A0G2JQZ4 141 aa8.55□□□□□ -1.04
PDZRN3-208ENST00000479530 A0A1W2PNN7 141 aa8.55□□□□□ -1.04
PDZRN3-208ENST00000479530 DSCR10P59022 87 aa8.55□□□□□ -1.04
PDZRN3-208ENST00000479530 LINC00588Q9Y4M8 146 aa8.55□□□□□ -1.04
PDZRN3-208ENST00000479530 KRTAP4-16G5E9R7 235 aaPredicted RBP8.54□□□□□ -1.04
PDZRN3-208ENST00000479530 K7EQZ3 153 aa8.54□□□□□ -1.04
PDZRN3-208ENST00000479530 KRTAP7-1Q8IUC3 87 aa8.53□□□□□ -1.04
PDZRN3-208ENST00000479530 COL7A1Q02388 2944 aa8.53□□□□□ -1.04
PDZRN3-208ENST00000479530 Q8NBF4 154 aa8.52□□□□□ -1.05
PDZRN3-208ENST00000479530 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-208ENST00000479530 LCE6AA0A183 80 aa8.52□□□□□ -1.05
PDZRN3-208ENST00000479530 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.05
PDZRN3-208ENST00000479530 DNAH10OSP0CZ25 163 aa8.51□□□□□ -1.05
PDZRN3-208ENST00000479530 CD164Q04900 197 aa8.51□□□□□ -1.05
PDZRN3-208ENST00000479530 TENM2Q9NT68 2774 aa8.51□□□□□ -1.05
PDZRN3-208ENST00000479530 DHRS4-AS1Q9P1J3 65 aa8.51□□□□□ -1.05
PDZRN3-208ENST00000479530 IGLV1-50A0A075B6I6 118 aa8.5□□□□□ -1.05
PDZRN3-208ENST00000479530 hDV103S1A0JD37 113 aa8.5□□□□□ -1.05
PDZRN3-208ENST00000479530 PRR4Q16378 134 aa8.5□□□□□ -1.05
PDZRN3-208ENST00000479530 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
PDZRN3-208ENST00000479530 DNAH9Q9NYC9 4486 aa8.5□□□□□ -1.05
PDZRN3-208ENST00000479530 ETDCA0A1B0GVM5 59 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms