RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 TRAV10A0A0B4J240 114 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 STAB2Q8WWQ8 2551 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 C20orf197Q8N268 126 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 DNAH1Q9P2D7 4330 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 M0R378 163 aa7.06□□□□□ -1.28
VPS52-217ENST00000478934 SYCNQ0VAF6 134 aa7.06□□□□□ -1.28
VPS52-217ENST00000478934 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.06□□□□□ -1.28
VPS52-217ENST00000478934 LINC00588Q9Y4M8 146 aa7.06□□□□□ -1.28
VPS52-217ENST00000478934 Q8N9L7 120 aa7.06□□□□□ -1.28
VPS52-217ENST00000478934 RPL37AP8A6NKH3 93 aa7.05□□□□□ -1.28
VPS52-217ENST00000478934 ATP5EP2Q5VTU8 51 aa7.05□□□□□ -1.28
VPS52-217ENST00000478934 LINC00528Q8N1L1 170 aa7.04□□□□□ -1.28
VPS52-217ENST00000478934 TRBV7-4A0A0J9YYF1 115 aa7.03□□□□□ -1.28
VPS52-217ENST00000478934 OXTP01178 125 aa7.03□□□□□ -1.28
VPS52-217ENST00000478934 C7orf33Q8WU49 177 aa7.03□□□□□ -1.28
VPS52-217ENST00000478934 C3orf84H3BNL1 204 aa7.02□□□□□ -1.29
VPS52-217ENST00000478934 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
VPS52-217ENST00000478934 FAM19A5Q7Z5A7 132 aaPredicted RBP7.02□□□□□ -1.29
VPS52-217ENST00000478934 SNURFQ9Y675 71 aa7.02□□□□□ -1.29
VPS52-217ENST00000478934 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
VPS52-217ENST00000478934 J3KT08 172 aa7.01□□□□□ -1.29
VPS52-217ENST00000478934 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
VPS52-217ENST00000478934 SRRM2Q9UQ35 2752 aaKnown RBP7.01□□□□□ -1.29
VPS52-217ENST00000478934 K7EIL1 84 aa7□□□□□ -1.29
VPS52-217ENST00000478934 NKAPP1Q8N9T2 125 aa7□□□□□ -1.29
VPS52-217ENST00000478934 TMEM258P61165 79 aa6.99□□□□□ -1.29
VPS52-217ENST00000478934 TM2D3Q9BRN9 247 aa6.99□□□□□ -1.29
VPS52-217ENST00000478934 DNAH9Q9NYC9 4486 aa6.98□□□□□ -1.29
VPS52-217ENST00000478934 DNAH7Q8WXX0 4024 aa6.98□□□□□ -1.29
VPS52-217ENST00000478934 BPY2O14599 106 aa6.98□□□□□ -1.29
VPS52-217ENST00000478934 RMI2Q96E14 147 aa6.98□□□□□ -1.29
VPS52-217ENST00000478934 TRBV7-6A0A0J9YX20 115 aa6.97□□□□□ -1.29
VPS52-217ENST00000478934 ST20-AS1Q8NBB2 130 aa6.97□□□□□ -1.29
VPS52-217ENST00000478934 Q8N377 158 aa6.97□□□□□ -1.29
VPS52-217ENST00000478934 KCNQ1DNQ9H478 68 aa6.97□□□□□ -1.29
VPS52-217ENST00000478934 PDE6GP18545 87 aa6.97□□□□□ -1.29
VPS52-217ENST00000478934 Q9BRP9 147 aa6.96□□□□□ -1.3
VPS52-217ENST00000478934 CXCL6P80162 114 aa6.96□□□□□ -1.3
VPS52-217ENST00000478934 KRTAP1-5Q9BYS1 174 aa6.96□□□□□ -1.3
VPS52-217ENST00000478934 A0A0G2JQZ4 141 aa6.95□□□□□ -1.3
VPS52-217ENST00000478934 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
VPS52-217ENST00000478934 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
VPS52-217ENST00000478934 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
VPS52-217ENST00000478934 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
VPS52-217ENST00000478934 H7BZZ5 65 aa6.93□□□□□ -1.3
VPS52-217ENST00000478934 NREPQ16612 68 aa6.93□□□□□ -1.3
VPS52-217ENST00000478934 KRTAP4-16G5E9R7 235 aaPredicted RBP6.92□□□□□ -1.3
VPS52-217ENST00000478934 H3BQ85 93 aa6.92□□□□□ -1.3
VPS52-217ENST00000478934 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
VPS52-217ENST00000478934 F8WEM9 126 aa6.91□□□□□ -1.3
VPS52-217ENST00000478934 C4orf26Q17RF5 130 aa6.91□□□□□ -1.3
VPS52-217ENST00000478934 Q6ZRX8 168 aa6.91□□□□□ -1.3
VPS52-217ENST00000478934 IGKV2-24A0A0C4DH68 120 aa6.91□□□□□ -1.3
VPS52-217ENST00000478934 ETDCA0A1B0GVM5 59 aa6.91□□□□□ -1.3
VPS52-217ENST00000478934 IGKV4-1P06312 121 aa6.91□□□□□ -1.3
VPS52-217ENST00000478934 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
VPS52-217ENST00000478934 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
VPS52-217ENST00000478934 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
VPS52-217ENST00000478934 F8WDY8 70 aa6.9□□□□□ -1.31
VPS52-217ENST00000478934 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.31
VPS52-217ENST00000478934 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.89□□□□□ -1.31
VPS52-217ENST00000478934 A0A1W2PNM2 257 aa6.89□□□□□ -1.31
VPS52-217ENST00000478934 UBE2BP63146 152 aa6.89□□□□□ -1.31
VPS52-217ENST00000478934 A0A096LNI7 61 aa6.88□□□□□ -1.31
VPS52-217ENST00000478934 PLECQ15149 4684 aaKnown RBP6.88□□□□□ -1.31
VPS52-217ENST00000478934 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
VPS52-217ENST00000478934 SPRR1AP35321 89 aa6.87□□□□□ -1.31
VPS52-217ENST00000478934 C1orf137Q5JT78 98 aa6.87□□□□□ -1.31
VPS52-217ENST00000478934 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
VPS52-217ENST00000478934 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 IGLV5-37A0A075B6J1 123 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 PRYO14603 147 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 CHTF8P0CG12 524 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 PRLHP81277 87 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 DEFB116Q30KQ4 102 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 Q5XG85 94 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
VPS52-217ENST00000478934 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
VPS52-217ENST00000478934 KRTAP11-1Q8IUC1 163 aa6.85□□□□□ -1.31
VPS52-217ENST00000478934 FUSP35637 526 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS52-217ENST00000478934 SMIM29Q86T20 159 aa6.84□□□□□ -1.31
VPS52-217ENST00000478934 TMEM254Q8TBM7 123 aa6.84□□□□□ -1.31
VPS52-217ENST00000478934 PSCAO43653 123 aa6.83□□□□□ -1.32
VPS52-217ENST00000478934 TNP2Q05952 138 aa6.83□□□□□ -1.32
VPS52-217ENST00000478934 REG3GQ6UW15 175 aa6.83□□□□□ -1.32
VPS52-217ENST00000478934 HIGD2AQ9BW72 106 aa6.83□□□□□ -1.32
VPS52-217ENST00000478934 BCE1O60756 84 aa6.82□□□□□ -1.32
VPS52-217ENST00000478934 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
VPS52-217ENST00000478934 MDFIQ99750 246 aa6.82□□□□□ -1.32
VPS52-217ENST00000478934 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
VPS52-217ENST00000478934 K7EQZ3 153 aa6.8□□□□□ -1.32
VPS52-217ENST00000478934 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
VPS52-217ENST00000478934 Q8NBF4 154 aa6.8□□□□□ -1.32
VPS52-217ENST00000478934 APLNQ9ULZ1 77 aa6.8□□□□□ -1.32
VPS52-217ENST00000478934 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
VPS52-217ENST00000478934 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
VPS52-217ENST00000478934 LINC00474Q9P2X8 69 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms