RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MPLKIPQ8TAP9 179 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
SF3B6-202ENST00000478050 DYNC2H1Q8NCM8 4307 aaKnown RBP3.33□□□□□ -1.88
SF3B6-202ENST00000478050 JMJD7-PLA2G4BH0Y9G9 81 aa3.32□□□□□ -1.88
SF3B6-202ENST00000478050 Q75L30 129 aa3.32□□□□□ -1.88
SF3B6-202ENST00000478050 SMCR5Q8TEV8 140 aa3.32□□□□□ -1.88
SF3B6-202ENST00000478050 KLK12Q9UKR0 248 aa3.32□□□□□ -1.88
SF3B6-202ENST00000478050 SACSQ9NZJ4 4579 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 H3BQ85 93 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 TMEM256-PLSCR3K7ERE1 68 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 S100A7L2Q5SY68 101 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 CASC10Q5T4H9 136 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 Q6JHZ5 121 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 LYPD5Q6UWN5 251 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 ENHOQ6UWT2 76 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 Q8N814 137 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 C14orf132Q9NPU4 83 aa3.31□□□□□ -1.88
SF3B6-202ENST00000478050 FAM236AA0A1B0GUQ0 79 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 FAM236BA0A1B0GV22 79 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 NCR3O14931 201 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 CCKP06307 115 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 PRR3P79522 188 aaKnown RBP3.3□□□□□ -1.88
SF3B6-202ENST00000478050 C6orf99Q4VX62 202 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 C9orf116Q5BN46 136 aaPredicted RBP3.3□□□□□ -1.88
SF3B6-202ENST00000478050 KPRPQ5T749 579 aaPredicted RBP3.3□□□□□ -1.88
SF3B6-202ENST00000478050 LINC00575Q6W349 94 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 C6orf223Q8N319 242 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 DNAH1Q9P2D7 4330 aa3.3□□□□□ -1.88
SF3B6-202ENST00000478050 F8WDY8 70 aa3.29□□□□□ -1.88
SF3B6-202ENST00000478050 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
SF3B6-202ENST00000478050 IGLV6-57P01721 117 aa3.29□□□□□ -1.88
SF3B6-202ENST00000478050 EGFEM1PQ0D2K5 195 aa3.29□□□□□ -1.88
SF3B6-202ENST00000478050 C9orf129Q5T035 196 aaKnown RBP3.29□□□□□ -1.88
SF3B6-202ENST00000478050 C2orf48Q96LS8 159 aa3.29□□□□□ -1.88
SF3B6-202ENST00000478050 C6orf48Q9UBA6 75 aa3.29□□□□□ -1.88
SF3B6-202ENST00000478050 TRBV7-6A0A0J9YX20 115 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 hADV29S1A0JD25 119 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 ATOX1O00244 68 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 HIST1H4AP62805 103 aaKnown RBP3.28□□□□□ -1.88
SF3B6-202ENST00000478050 RPL18AQ02543 176 aaKnown RBP3.28□□□□□ -1.88
SF3B6-202ENST00000478050 ATP5EP2Q5VTU8 51 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 WFDC10BQ8IUB3 73 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 PRR26Q8N8Z3 221 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 Q8NDZ9 215 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 DIRC1Q969H9 104 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 LINC00846Q9NV44 126 aa3.28□□□□□ -1.88
SF3B6-202ENST00000478050 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 LOC110117498A0A087WWA1 95 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 IGLV5-52A0A0A0MRZ9 124 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 UQCRQO14949 82 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 PDE6GP18545 87 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 LINC01556Q5JQF7 62 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 KRTAP26-1Q6PEX3 210 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 Q6ZTC4 211 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 LINC00526Q96FQ7 95 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 CAMK2N2Q96S95 79 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 RETNQ9HD89 108 aa3.27□□□□□ -1.89
SF3B6-202ENST00000478050 DNAH3Q8TD57 4116 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 IGKV3D-7A0A0C4DH55 119 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 TRBV10-3A0A0K0K1G6 114 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 NDUFC2-KCTD14E9PQ53 114 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 M0R378 163 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 COX7BP24311 80 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 RBM3P98179 157 aaKnown RBP3.26□□□□□ -1.89
SF3B6-202ENST00000478050 ESRGQ1W209 222 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.26□□□□□ -1.89
SF3B6-202ENST00000478050 C3orf22Q8N5N4 141 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 SS18L2Q9UHA2 77 aa3.26□□□□□ -1.89
SF3B6-202ENST00000478050 DEFB131BA0A096LNP1 70 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 ZNF73O43830 326 aaPredicted RBP3.25□□□□□ -1.89
SF3B6-202ENST00000478050 COX7CP15954 63 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 ELOF1P60002 83 aaKnown RBP3.25□□□□□ -1.89
SF3B6-202ENST00000478050 HIGD2BQ4VC39 106 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 C9orf153Q5TBE3 101 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 Q6ZQT0 140 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 Q6ZQY7 126 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 Q6ZRU5 148 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 C11orf45Q8TAV5 145 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 UBL5Q9BZL1 73 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 XAGE1AQ9HD64 81 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 LAMTOR3Q9UHA4 124 aa3.25□□□□□ -1.89
SF3B6-202ENST00000478050 IGLV5-37A0A075B6J1 123 aa3.24□□□□□ -1.89
SF3B6-202ENST00000478050 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
SF3B6-202ENST00000478050 TRAV10A0A0B4J240 114 aa3.24□□□□□ -1.89
SF3B6-202ENST00000478050 DNAH10OSP0CZ25 163 aa3.24□□□□□ -1.89
SF3B6-202ENST00000478050 DSCR8Q96T75 97 aa3.24□□□□□ -1.89
SF3B6-202ENST00000478050 B9D2Q9BPU9 175 aa3.24□□□□□ -1.89
SF3B6-202ENST00000478050 TLX1NBP0CAT3 122 aa3.23□□□□□ -1.89
SF3B6-202ENST00000478050 CRYGAP11844 174 aa3.23□□□□□ -1.89
SF3B6-202ENST00000478050 SYCNQ0VAF6 134 aa3.23□□□□□ -1.89
SF3B6-202ENST00000478050 SERP2Q8N6R1 65 aa3.23□□□□□ -1.89
SF3B6-202ENST00000478050 RMI2Q96E14 147 aa3.23□□□□□ -1.89
SF3B6-202ENST00000478050 TRBV7-4A0A0J9YYF1 115 aa3.22□□□□□ -1.89
SF3B6-202ENST00000478050 BCE1O60756 84 aa3.22□□□□□ -1.89
SF3B6-202ENST00000478050 Q6ZRP5 223 aa3.22□□□□□ -1.89
SF3B6-202ENST00000478050 NKAPP1Q8N9T2 125 aa3.22□□□□□ -1.89
SF3B6-202ENST00000478050 A0A087WVE0 104 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms