RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
HLA-DMA-208ENST00000477541 NREPQ16612 68 aa9.01□□□□□ -0.97
HLA-DMA-208ENST00000477541 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
HLA-DMA-208ENST00000477541 F8WEM9 126 aa9□□□□□ -0.97
HLA-DMA-208ENST00000477541 HRCT1Q6UXD1 115 aa9□□□□□ -0.97
HLA-DMA-208ENST00000477541 XAGE1AQ9HD64 81 aa9□□□□□ -0.97
HLA-DMA-208ENST00000477541 TENM1Q9UKZ4 2725 aa9□□□□□ -0.97
HLA-DMA-208ENST00000477541 BPY2O14599 106 aa8.99□□□□□ -0.97
HLA-DMA-208ENST00000477541 RMI2Q96E14 147 aa8.98□□□□□ -0.97
HLA-DMA-208ENST00000477541 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
HLA-DMA-208ENST00000477541 DEFB4AO15263 64 aa8.97□□□□□ -0.97
HLA-DMA-208ENST00000477541 TM2D3Q9BRN9 247 aa8.97□□□□□ -0.97
HLA-DMA-208ENST00000477541 TMEM254Q8TBM7 123 aa8.97□□□□□ -0.97
HLA-DMA-208ENST00000477541 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
HLA-DMA-208ENST00000477541 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
HLA-DMA-208ENST00000477541 IGKV4-1P06312 121 aa8.95□□□□□ -0.98
HLA-DMA-208ENST00000477541 HTN3P15516 51 aa8.94□□□□□ -0.98
HLA-DMA-208ENST00000477541 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
HLA-DMA-208ENST00000477541 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
HLA-DMA-208ENST00000477541 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
HLA-DMA-208ENST00000477541 TRRAPQ9Y4A5 3859 aa8.93□□□□□ -0.98
HLA-DMA-208ENST00000477541 Q6ZRU5 148 aa8.93□□□□□ -0.98
HLA-DMA-208ENST00000477541 OCR1Q9BZK8 76 aa8.93□□□□□ -0.98
HLA-DMA-208ENST00000477541 PRO0628Q9UI54 55 aa8.93□□□□□ -0.98
HLA-DMA-208ENST00000477541 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
HLA-DMA-208ENST00000477541 DHRS4-AS1Q9P1J3 65 aa8.92□□□□□ -0.98
HLA-DMA-208ENST00000477541 PLA2G2DQ9UNK4 145 aa8.92□□□□□ -0.98
HLA-DMA-208ENST00000477541 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
HLA-DMA-208ENST00000477541 SCXQ7RTU7 201 aa8.91□□□□□ -0.98
HLA-DMA-208ENST00000477541 PRYO14603 147 aa8.91□□□□□ -0.98
HLA-DMA-208ENST00000477541 TLX1NBP0CAT3 122 aa8.89□□□□□ -0.99
HLA-DMA-208ENST00000477541 FUSP35637 526 aaKnown RBP eCLIP8.89□□□□□ -0.99
HLA-DMA-208ENST00000477541 C1orf43Q9BWL3 253 aa8.89□□□□□ -0.99
HLA-DMA-208ENST00000477541 NBEAL2Q6ZNJ1 2754 aa8.89□□□□□ -0.99
HLA-DMA-208ENST00000477541 FP248Q71RG6 208 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMA-208ENST00000477541 NKAPP1Q8N9T2 125 aa8.88□□□□□ -0.99
HLA-DMA-208ENST00000477541 PRKDCP78527 4128 aaKnown RBP8.88□□□□□ -0.99
HLA-DMA-208ENST00000477541 KPRPQ5T749 579 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMA-208ENST00000477541 WFDC10BQ8IUB3 73 aa8.88□□□□□ -0.99
HLA-DMA-208ENST00000477541 IGLV5-37A0A075B6J1 123 aa8.87□□□□□ -0.99
HLA-DMA-208ENST00000477541 SYCNQ0VAF6 134 aa8.87□□□□□ -0.99
HLA-DMA-208ENST00000477541 LINC01556Q5JQF7 62 aa8.87□□□□□ -0.99
HLA-DMA-208ENST00000477541 LCE6AA0A183 80 aa8.86□□□□□ -0.99
HLA-DMA-208ENST00000477541 Q6ZRP5 223 aa8.86□□□□□ -0.99
HLA-DMA-208ENST00000477541 Q8N377 158 aa8.85□□□□□ -0.99
HLA-DMA-208ENST00000477541 TNP2Q05952 138 aa8.83□□□□□ -1
HLA-DMA-208ENST00000477541 Q6ZRX8 168 aa8.83□□□□□ -1
HLA-DMA-208ENST00000477541 C7orf33Q8WU49 177 aa8.83□□□□□ -1
HLA-DMA-208ENST00000477541 SPRR1AP35321 89 aa8.82□□□□□ -1
HLA-DMA-208ENST00000477541 LINC00336Q6ZUF6 198 aa8.82□□□□□ -1
HLA-DMA-208ENST00000477541 Q8NBF4 154 aa8.82□□□□□ -1
HLA-DMA-208ENST00000477541 SPRR4Q96PI1 79 aa8.82□□□□□ -1
HLA-DMA-208ENST00000477541 ESRGQ1W209 222 aa8.81□□□□□ -1
HLA-DMA-208ENST00000477541 KMT2CQ8NEZ4 4911 aaKnown RBP8.81□□□□□ -1
HLA-DMA-208ENST00000477541 VWFP04275 2813 aa8.81□□□□□ -1
HLA-DMA-208ENST00000477541 KRTAP4-16G5E9R7 235 aaPredicted RBP8.8□□□□□ -1
HLA-DMA-208ENST00000477541 C3orf84H3BNL1 204 aa8.8□□□□□ -1
HLA-DMA-208ENST00000477541 Q8N9L7 120 aa8.8□□□□□ -1
HLA-DMA-208ENST00000477541 Q6ZTC4 211 aa8.8□□□□□ -1
HLA-DMA-208ENST00000477541 IGKV2D-24A0A075B6R9 120 aa8.79□□□□□ -1
HLA-DMA-208ENST00000477541 ETDCA0A1B0GVM5 59 aa8.79□□□□□ -1
HLA-DMA-208ENST00000477541 C1orf137Q5JT78 98 aa8.79□□□□□ -1
HLA-DMA-208ENST00000477541 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
HLA-DMA-208ENST00000477541 DNAH10OSP0CZ25 163 aa8.78□□□□□ -1
HLA-DMA-208ENST00000477541 A0A1W2PNM2 257 aa8.77□□□□□ -1
HLA-DMA-208ENST00000477541 SERTAD4-AS1Q5TG53 156 aa8.77□□□□□ -1
HLA-DMA-208ENST00000477541 RYR3Q15413 4870 aa8.76□□□□□ -1.01
HLA-DMA-208ENST00000477541 DEFB105AQ8NG35 78 aa8.76□□□□□ -1.01
HLA-DMA-208ENST00000477541 CMYA5Q8N3K9 4069 aa8.76□□□□□ -1.01
HLA-DMA-208ENST00000477541 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
HLA-DMA-208ENST00000477541 HIGD2AQ9BW72 106 aa8.75□□□□□ -1.01
HLA-DMA-208ENST00000477541 LINC00474Q9P2X8 69 aa8.75□□□□□ -1.01
HLA-DMA-208ENST00000477541 ZCCHC13Q8WW36 166 aaKnown RBP8.74□□□□□ -1.01
HLA-DMA-208ENST00000477541 Q9BRP9 147 aa8.74□□□□□ -1.01
HLA-DMA-208ENST00000477541 hDV103S1A0JD37 113 aa8.71□□□□□ -1.01
HLA-DMA-208ENST00000477541 NDUFB1O75438 58 aa8.71□□□□□ -1.02
HLA-DMA-208ENST00000477541 DSCR10P59022 87 aa8.71□□□□□ -1.02
HLA-DMA-208ENST00000477541 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
HLA-DMA-208ENST00000477541 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
HLA-DMA-208ENST00000477541 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
HLA-DMA-208ENST00000477541 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
HLA-DMA-208ENST00000477541 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
HLA-DMA-208ENST00000477541 FAM229BQ4G0N7 80 aa8.68□□□□□ -1.02
HLA-DMA-208ENST00000477541 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
HLA-DMA-208ENST00000477541 Q1T7F1 81 aa8.68□□□□□ -1.02
HLA-DMA-208ENST00000477541 IGLV8-61A0A075B6I0 122 aa8.67□□□□□ -1.02
HLA-DMA-208ENST00000477541 C11orf45Q8TAV5 145 aa8.67□□□□□ -1.02
HLA-DMA-208ENST00000477541 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
HLA-DMA-208ENST00000477541 RETNQ9HD89 108 aa8.66□□□□□ -1.02
HLA-DMA-208ENST00000477541 REG3GQ6UW15 175 aa8.66□□□□□ -1.02
HLA-DMA-208ENST00000477541 UBE2BP63146 152 aa8.65□□□□□ -1.03
HLA-DMA-208ENST00000477541 ST20-AS1Q8NBB2 130 aa8.65□□□□□ -1.03
HLA-DMA-208ENST00000477541 H3BPC8 53 aa8.64□□□□□ -1.03
HLA-DMA-208ENST00000477541 K7EQZ3 153 aa8.64□□□□□ -1.03
HLA-DMA-208ENST00000477541 MPLKIPQ8TAP9 179 aa8.64□□□□□ -1.03
HLA-DMA-208ENST00000477541 LINC00476Q8WZB0 136 aa8.63□□□□□ -1.03
HLA-DMA-208ENST00000477541 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.63□□□□□ -1.03
HLA-DMA-208ENST00000477541 V9GYY9 64 aa8.63□□□□□ -1.03
HLA-DMA-208ENST00000477541 PSCAO43653 123 aa8.62□□□□□ -1.03
HLA-DMA-208ENST00000477541 MP68P56378 58 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms