RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ELOF1P60002 83 aaKnown RBP9.09□□□□□ -0.95
SEMA4D-217ENST00000475255 TMEM254Q8TBM7 123 aa9.09□□□□□ -0.95
SEMA4D-217ENST00000475255 PRR34Q9NV39 138 aa9.08□□□□□ -0.96
SEMA4D-217ENST00000475255 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
SEMA4D-217ENST00000475255 PDE6GP18545 87 aa9.07□□□□□ -0.96
SEMA4D-217ENST00000475255 SMIM26A0A096LP01 95 aa9.06□□□□□ -0.96
SEMA4D-217ENST00000475255 SPART-AS1P0CW21 52 aa9.06□□□□□ -0.96
SEMA4D-217ENST00000475255 HIGD2AQ9BW72 106 aa9.06□□□□□ -0.96
SEMA4D-217ENST00000475255 RETNQ9HD89 108 aa9.06□□□□□ -0.96
SEMA4D-217ENST00000475255 FAM30AQ9NZY2 134 aa9.06□□□□□ -0.96
SEMA4D-217ENST00000475255 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
SEMA4D-217ENST00000475255 APOC4P55056 127 aa9.03□□□□□ -0.96
SEMA4D-217ENST00000475255 Q6ZRP5 223 aa9.03□□□□□ -0.96
SEMA4D-217ENST00000475255 NSD1Q96L73 2696 aaPredicted RBP9.03□□□□□ -0.96
SEMA4D-217ENST00000475255 GVQW2A0A096LPI5 108 aaPredicted RBP9.03□□□□□ -0.96
SEMA4D-217ENST00000475255 EPM2AB3EWF7 344 aa9.03□□□□□ -0.96
SEMA4D-217ENST00000475255 IGKV4-1P06312 121 aa9.03□□□□□ -0.96
SEMA4D-217ENST00000475255 PRR4Q16378 134 aa9.03□□□□□ -0.96
SEMA4D-217ENST00000475255 PRO0628Q9UI54 55 aa9.02□□□□□ -0.97
SEMA4D-217ENST00000475255 FLNBO75369 2602 aaKnown RBP9.02□□□□□ -0.97
SEMA4D-217ENST00000475255 RPL37AP8A6NKH3 93 aa9.02□□□□□ -0.97
SEMA4D-217ENST00000475255 M0R378 163 aa9.02□□□□□ -0.97
SEMA4D-217ENST00000475255 C15orf56Q8N910 161 aa9.01□□□□□ -0.97
SEMA4D-217ENST00000475255 BCE1O60756 84 aa9.01□□□□□ -0.97
SEMA4D-217ENST00000475255 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
SEMA4D-217ENST00000475255 MAST4O15021 2626 aa9□□□□□ -0.97
SEMA4D-217ENST00000475255 NOTCH1P46531 2555 aa9□□□□□ -0.97
SEMA4D-217ENST00000475255 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
SEMA4D-217ENST00000475255 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
SEMA4D-217ENST00000475255 FUSP35637 526 aaKnown RBP eCLIP8.99□□□□□ -0.97
SEMA4D-217ENST00000475255 KPRPQ5T749 579 aaPredicted RBP8.99□□□□□ -0.97
SEMA4D-217ENST00000475255 PRYO14603 147 aa8.99□□□□□ -0.97
SEMA4D-217ENST00000475255 SMIM29Q86T20 159 aa8.98□□□□□ -0.97
SEMA4D-217ENST00000475255 EGFEM1PQ0D2K5 195 aa8.98□□□□□ -0.97
SEMA4D-217ENST00000475255 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
SEMA4D-217ENST00000475255 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
SEMA4D-217ENST00000475255 A0A1W2PNN7 141 aa8.97□□□□□ -0.97
SEMA4D-217ENST00000475255 Q8N377 158 aa8.97□□□□□ -0.97
SEMA4D-217ENST00000475255 Q6ZTC4 211 aa8.97□□□□□ -0.97
SEMA4D-217ENST00000475255 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
SEMA4D-217ENST00000475255 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
SEMA4D-217ENST00000475255 FAM168BA1KXE4 195 aa8.96□□□□□ -0.97
SEMA4D-217ENST00000475255 NDUFC1O43677 76 aa8.96□□□□□ -0.97
SEMA4D-217ENST00000475255 OCR1Q9BZK8 76 aa8.96□□□□□ -0.97
SEMA4D-217ENST00000475255 DEFB116Q30KQ4 102 aa8.95□□□□□ -0.98
SEMA4D-217ENST00000475255 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
SEMA4D-217ENST00000475255 H3BQ85 93 aa8.95□□□□□ -0.98
SEMA4D-217ENST00000475255 ESRGQ1W209 222 aa8.95□□□□□ -0.98
SEMA4D-217ENST00000475255 INAFM1C9JVW0 142 aa8.94□□□□□ -0.98
SEMA4D-217ENST00000475255 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
SEMA4D-217ENST00000475255 SYCNQ0VAF6 134 aa8.92□□□□□ -0.98
SEMA4D-217ENST00000475255 A0A1W2PNM2 257 aa8.92□□□□□ -0.98
SEMA4D-217ENST00000475255 FBN1P35555 2871 aaKnown RBP8.91□□□□□ -0.98
SEMA4D-217ENST00000475255 COL6A5A8TX70 2615 aa8.9□□□□□ -0.98
SEMA4D-217ENST00000475255 CASC10Q5T4H9 136 aa8.9□□□□□ -0.99
SEMA4D-217ENST00000475255 Q9BRP9 147 aa8.9□□□□□ -0.99
SEMA4D-217ENST00000475255 SRRM2Q9UQ35 2752 aaKnown RBP8.9□□□□□ -0.99
SEMA4D-217ENST00000475255 J3QKU1 62 aa8.89□□□□□ -0.99
SEMA4D-217ENST00000475255 ERC2-IT1O76042 136 aa8.89□□□□□ -0.99
SEMA4D-217ENST00000475255 PSPHP1O15172 72 aa8.88□□□□□ -0.99
SEMA4D-217ENST00000475255 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
SEMA4D-217ENST00000475255 C1orf195Q5TG92 126 aa8.88□□□□□ -0.99
SEMA4D-217ENST00000475255 KCNQ1DNQ9H478 68 aa8.87□□□□□ -0.99
SEMA4D-217ENST00000475255 ANK2Q01484 3957 aa8.87□□□□□ -0.99
SEMA4D-217ENST00000475255 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
SEMA4D-217ENST00000475255 ATP5EP56381 51 aaPredicted RBP8.86□□□□□ -0.99
SEMA4D-217ENST00000475255 UBE2BP63146 152 aa8.86□□□□□ -0.99
SEMA4D-217ENST00000475255 K7EQZ3 153 aa8.86□□□□□ -0.99
SEMA4D-217ENST00000475255 WFDC13Q8IUB5 93 aa8.84□□□□□ -0.99
SEMA4D-217ENST00000475255 IGLV5-48A0A075B6I7 105 aa8.84□□□□□ -0.99
SEMA4D-217ENST00000475255 Q6ZRX8 168 aa8.84□□□□□ -0.99
SEMA4D-217ENST00000475255 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
SEMA4D-217ENST00000475255 DSCR10P59022 87 aa8.82□□□□□ -1
SEMA4D-217ENST00000475255 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
SEMA4D-217ENST00000475255 NBEAL1Q6ZS30 2694 aa8.82□□□□□ -1
SEMA4D-217ENST00000475255 C1orf64Q8NEQ6 169 aa8.82□□□□□ -1
SEMA4D-217ENST00000475255 KMT2BQ9UMN6 2715 aaPredicted RBP8.81□□□□□ -1
SEMA4D-217ENST00000475255 DEFB131BA0A096LNP1 70 aa8.81□□□□□ -1
SEMA4D-217ENST00000475255 KRTAP10-11P60412 298 aa8.8□□□□□ -1
SEMA4D-217ENST00000475255 Q8NBF4 154 aa8.8□□□□□ -1
SEMA4D-217ENST00000475255 IGLV1-50A0A075B6I6 118 aa8.78□□□□□ -1
SEMA4D-217ENST00000475255 KRTAP4-16G5E9R7 235 aaPredicted RBP8.78□□□□□ -1
SEMA4D-217ENST00000475255 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
SEMA4D-217ENST00000475255 LINC01556Q5JQF7 62 aa8.78□□□□□ -1
SEMA4D-217ENST00000475255 DHRS4-AS1Q9P1J3 65 aa8.78□□□□□ -1
SEMA4D-217ENST00000475255 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.77□□□□□ -1
SEMA4D-217ENST00000475255 TNP2Q05952 138 aa8.77□□□□□ -1
SEMA4D-217ENST00000475255 hDV103S1A0JD37 113 aa8.76□□□□□ -1.01
SEMA4D-217ENST00000475255 A0A096LNI7 61 aa8.75□□□□□ -1.01
SEMA4D-217ENST00000475255 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
SEMA4D-217ENST00000475255 PRLHP81277 87 aa8.75□□□□□ -1.01
SEMA4D-217ENST00000475255 LINC00476Q8WZB0 136 aa8.75□□□□□ -1.01
SEMA4D-217ENST00000475255 C11orf45Q8TAV5 145 aa8.74□□□□□ -1.01
SEMA4D-217ENST00000475255 PSCAO43653 123 aa8.74□□□□□ -1.01
SEMA4D-217ENST00000475255 MRPL55Q7Z7F7 128 aaKnown RBP8.73□□□□□ -1.01
SEMA4D-217ENST00000475255 A0A087WSZ3 146 aa8.73□□□□□ -1.01
SEMA4D-217ENST00000475255 LINC00208Q96KT6 92 aa8.73□□□□□ -1.01
SEMA4D-217ENST00000475255 H3BNG1 76 aa8.72□□□□□ -1.01
SEMA4D-217ENST00000475255 HCG22E2RYF7 251 aa8.72□□□□□ -1.01
SEMA4D-217ENST00000475255 A8MU10 97 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms