RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 ELOF1P60002 83 aaKnown RBP12.62□□□□□ -0.39
SSR1-204ENST00000474597 PPDPFLQ8WWR9 84 aa12.62□□□□□ -0.39
SSR1-204ENST00000474597 J3QR89 54 aa12.61□□□□□ -0.39
SSR1-204ENST00000474597 RTL8CO15255 209 aa12.61□□□□□ -0.39
SSR1-204ENST00000474597 ORMDL1Q9P0S3 153 aa12.61□□□□□ -0.39
SSR1-204ENST00000474597 A0A1W2PNN7 141 aa12.6□□□□□ -0.39
SSR1-204ENST00000474597 PRYO14603 147 aa12.6□□□□□ -0.39
SSR1-204ENST00000474597 ALMS1Q8TCU4 4167 aa12.59□□□□□ -0.39
SSR1-204ENST00000474597 DPH3Q96FX2 82 aa12.58□□□□□ -0.4
SSR1-204ENST00000474597 DNAH6Q9C0G6 4158 aa12.58□□□□□ -0.4
SSR1-204ENST00000474597 TNP2Q05952 138 aa12.57□□□□□ -0.4
SSR1-204ENST00000474597 IGLV5-52A0A0A0MRZ9 124 aa12.56□□□□□ -0.4
SSR1-204ENST00000474597 TEX49A0A1B0GTD5 131 aa12.55□□□□□ -0.4
SSR1-204ENST00000474597 FUSP35637 526 aaKnown RBP eCLIP12.55□□□□□ -0.4
SSR1-204ENST00000474597 ETDCA0A1B0GVM5 59 aa12.55□□□□□ -0.4
SSR1-204ENST00000474597 LINC00528Q8N1L1 170 aa12.55□□□□□ -0.4
SSR1-204ENST00000474597 TMEM256-PLSCR3K7ERE1 68 aa12.53□□□□□ -0.4
SSR1-204ENST00000474597 REG3GQ6UW15 175 aa12.53□□□□□ -0.4
SSR1-204ENST00000474597 SPRR1AP35321 89 aa12.52□□□□□ -0.41
SSR1-204ENST00000474597 UBE2BP63146 152 aa12.51□□□□□ -0.41
SSR1-204ENST00000474597 Q6ZQY7 126 aa12.51□□□□□ -0.41
SSR1-204ENST00000474597 SPACA4Q8TDM5 124 aa12.51□□□□□ -0.41
SSR1-204ENST00000474597 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
SSR1-204ENST00000474597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.5□□□□□ -0.41
SSR1-204ENST00000474597 H3BQ85 93 aa12.49□□□□□ -0.41
SSR1-204ENST00000474597 PANO1I0J062 215 aa12.49□□□□□ -0.41
SSR1-204ENST00000474597 GHRHP01286 108 aa12.49□□□□□ -0.41
SSR1-204ENST00000474597 INAFM2P0DMQ5 153 aa12.49□□□□□ -0.41
SSR1-204ENST00000474597 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.49□□□□□ -0.41
SSR1-204ENST00000474597 B5MCH6 92 aa12.48□□□□□ -0.41
SSR1-204ENST00000474597 Q6ZRX8 168 aa12.48□□□□□ -0.41
SSR1-204ENST00000474597 KRTAP4-16G5E9R7 235 aaPredicted RBP12.48□□□□□ -0.41
SSR1-204ENST00000474597 DNAH2Q9P225 4427 aa12.47□□□□□ -0.41
SSR1-204ENST00000474597 DHRS4-AS1Q9P1J3 65 aa12.47□□□□□ -0.41
SSR1-204ENST00000474597 LCE6AA0A183 80 aa12.44□□□□□ -0.42
SSR1-204ENST00000474597 VPS25Q9BRG1 176 aa12.44□□□□□ -0.42
SSR1-204ENST00000474597 FAM19A1Q7Z5A9 133 aa12.42□□□□□ -0.42
SSR1-204ENST00000474597 JMJD7-PLA2G4BH0Y9G9 81 aa12.41□□□□□ -0.42
SSR1-204ENST00000474597 Q9BRP9 147 aa12.41□□□□□ -0.42
SSR1-204ENST00000474597 LAMTOR3Q9UHA4 124 aa12.41□□□□□ -0.42
SSR1-204ENST00000474597 A0A1B0GV72 72 aa12.41□□□□□ -0.42
SSR1-204ENST00000474597 KRTAP10-2P60368 255 aa12.4□□□□□ -0.42
SSR1-204ENST00000474597 OBSCN-AS1Q96MR7 158 aa12.39□□□□□ -0.43
SSR1-204ENST00000474597 DNAH17Q9UFH2 4485 aa12.39□□□□□ -0.43
SSR1-204ENST00000474597 EPM2AB3EWF7 344 aa12.39□□□□□ -0.43
SSR1-204ENST00000474597 C14orf132Q9NPU4 83 aa12.39□□□□□ -0.43
SSR1-204ENST00000474597 HECTD4Q9Y4D8 3996 aa12.39□□□□□ -0.43
SSR1-204ENST00000474597 FRAS1Q86XX4 4008 aa12.38□□□□□ -0.43
SSR1-204ENST00000474597 HYDINQ4G0P3 5121 aa12.38□□□□□ -0.43
SSR1-204ENST00000474597 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
SSR1-204ENST00000474597 PRLHP81277 87 aa12.37□□□□□ -0.43
SSR1-204ENST00000474597 PLAC8Q9NZF1 115 aa12.37□□□□□ -0.43
SSR1-204ENST00000474597 DEFB105AQ8NG35 78 aa12.36□□□□□ -0.43
SSR1-204ENST00000474597 UBE2AP49459 152 aa12.33□□□□□ -0.44
SSR1-204ENST00000474597 RBM3P98179 157 aaKnown RBP12.33□□□□□ -0.44
SSR1-204ENST00000474597 SMCR5Q8TEV8 140 aa12.33□□□□□ -0.44
SSR1-204ENST00000474597 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
SSR1-204ENST00000474597 HIGD2AQ9BW72 106 aa12.32□□□□□ -0.44
SSR1-204ENST00000474597 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
SSR1-204ENST00000474597 NDUFV3P56181 108 aaKnown RBP12.32□□□□□ -0.44
SSR1-204ENST00000474597 BCE1O60756 84 aa12.31□□□□□ -0.44
SSR1-204ENST00000474597 FAM240AA0A1B0GVK7 77 aa12.3□□□□□ -0.44
SSR1-204ENST00000474597 H0Y9J4 135 aa12.3□□□□□ -0.44
SSR1-204ENST00000474597 ST20-AS1Q8NBB2 130 aa12.3□□□□□ -0.44
SSR1-204ENST00000474597 ACYP1P07311 99 aa12.3□□□□□ -0.44
SSR1-204ENST00000474597 LINC00336Q6ZUF6 198 aa12.3□□□□□ -0.44
SSR1-204ENST00000474597 Q8N377 158 aa12.3□□□□□ -0.44
SSR1-204ENST00000474597 DSCR8Q96T75 97 aa12.29□□□□□ -0.44
SSR1-204ENST00000474597 LINC01547P58512 204 aaPredicted RBP12.27□□□□□ -0.44
SSR1-204ENST00000474597 IGLV5-48A0A075B6I7 105 aa12.27□□□□□ -0.45
SSR1-204ENST00000474597 CDIP1Q9H305 208 aa12.27□□□□□ -0.45
SSR1-204ENST00000474597 FAM30AQ9NZY2 134 aa12.25□□□□□ -0.45
SSR1-204ENST00000474597 CCKP06307 115 aa12.25□□□□□ -0.45
SSR1-204ENST00000474597 KRTAP10-1P60331 282 aa12.24□□□□□ -0.45
SSR1-204ENST00000474597 PSORS1C2Q9UIG4 136 aa12.23□□□□□ -0.45
SSR1-204ENST00000474597 SACSQ9NZJ4 4579 aa12.23□□□□□ -0.45
SSR1-204ENST00000474597 LOC110117498A0A087WWA1 95 aa12.23□□□□□ -0.45
SSR1-204ENST00000474597 PDE6GP18545 87 aa12.23□□□□□ -0.45
SSR1-204ENST00000474597 CIRBP-AS1Q8TBR5 109 aa12.22□□□□□ -0.45
SSR1-204ENST00000474597 C1orf137Q5JT78 98 aa12.21□□□□□ -0.45
SSR1-204ENST00000474597 Q6ZQT0 140 aa12.21□□□□□ -0.45
SSR1-204ENST00000474597 Q6ZSA8 131 aa12.21□□□□□ -0.45
SSR1-204ENST00000474597 C3orf22Q8N5N4 141 aa12.21□□□□□ -0.46
SSR1-204ENST00000474597 KRTAP13-1Q8IUC0 172 aa12.2□□□□□ -0.46
SSR1-204ENST00000474597 DNAH11Q96DT5 4516 aa12.2□□□□□ -0.46
SSR1-204ENST00000474597 SCXQ7RTU7 201 aa12.19□□□□□ -0.46
SSR1-204ENST00000474597 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
SSR1-204ENST00000474597 TRBV7-4A0A0J9YYF1 115 aa12.18□□□□□ -0.46
SSR1-204ENST00000474597 FAT2Q9NYQ8 4349 aa12.18□□□□□ -0.46
SSR1-204ENST00000474597 F8WEM9 126 aa12.16□□□□□ -0.46
SSR1-204ENST00000474597 C21orf62-AS1Q17RA5 79 aa12.16□□□□□ -0.46
SSR1-204ENST00000474597 PKD1P98161 4303 aa12.15□□□□□ -0.46
SSR1-204ENST00000474597 XGP55808 180 aa12.15□□□□□ -0.46
SSR1-204ENST00000474597 DNAH5Q8TE73 4624 aa12.15□□□□□ -0.46
SSR1-204ENST00000474597 HAMPP81172 84 aa12.13□□□□□ -0.47
SSR1-204ENST00000474597 SMIM29Q86T20 159 aa12.13□□□□□ -0.47
SSR1-204ENST00000474597 LINC00846Q9NV44 126 aa12.13□□□□□ -0.47
SSR1-204ENST00000474597 ZNF861PO60384 105 aa12.11□□□□□ -0.47
SSR1-204ENST00000474597 MT-ATP8P03928 68 aa12.11□□□□□ -0.47
SSR1-204ENST00000474597 SPRR1BP22528 89 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms