RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 ANGP03950 147 aaKnown RBP5.47□□□□□ -1.53
CCDC93-208ENST00000474546 RNASE1P07998 156 aaKnown RBP5.47□□□□□ -1.53
CCDC93-208ENST00000474546 APOC4P55056 127 aa5.47□□□□□ -1.53
CCDC93-208ENST00000474546 LELP1Q5T871 98 aa5.47□□□□□ -1.53
CCDC93-208ENST00000474546 C18orf65Q6ZTR6 163 aa5.47□□□□□ -1.53
CCDC93-208ENST00000474546 TMEM254Q8TBM7 123 aa5.47□□□□□ -1.53
CCDC93-208ENST00000474546 C19orf73Q9NVV2 129 aa5.47□□□□□ -1.53
CCDC93-208ENST00000474546 M0R378 163 aa5.46□□□□□ -1.54
CCDC93-208ENST00000474546 EGFEM1PQ0D2K5 195 aa5.46□□□□□ -1.54
CCDC93-208ENST00000474546 LINC00269Q8N2A0 174 aa5.46□□□□□ -1.54
CCDC93-208ENST00000474546 ESM1Q9NQ30 184 aa5.46□□□□□ -1.54
CCDC93-208ENST00000474546 DNAJC9-AS1A6NH13 148 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 NDUFB1O75438 58 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 OXTP01178 125 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 DEFB130BP0DP73 79 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 DEFB130AP0DP74 79 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 RPL35AP18077 110 aaKnown RBP5.45□□□□□ -1.54
CCDC93-208ENST00000474546 FUSP35637 526 aaKnown RBP eCLIP5.45□□□□□ -1.54
CCDC93-208ENST00000474546 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 CASC10Q5T4H9 136 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 KPRPQ5T749 579 aaPredicted RBP5.45□□□□□ -1.54
CCDC93-208ENST00000474546 PRR34Q9NV39 138 aa5.45□□□□□ -1.54
CCDC93-208ENST00000474546 PRYO14603 147 aa5.44□□□□□ -1.54
CCDC93-208ENST00000474546 V9GYY9 64 aa5.44□□□□□ -1.54
CCDC93-208ENST00000474546 H3BNG1 76 aa5.43□□□□□ -1.54
CCDC93-208ENST00000474546 ESRGQ1W209 222 aa5.43□□□□□ -1.54
CCDC93-208ENST00000474546 DHRS4-AS1Q9P1J3 65 aa5.43□□□□□ -1.54
CCDC93-208ENST00000474546 CELA1Q9UNI1 258 aa5.43□□□□□ -1.54
CCDC93-208ENST00000474546 DAD1P61803 113 aa5.42□□□□□ -1.54
CCDC93-208ENST00000474546 WFDC9Q8NEX5 89 aa5.42□□□□□ -1.54
CCDC93-208ENST00000474546 DNAH7Q8WXX0 4024 aa5.42□□□□□ -1.54
CCDC93-208ENST00000474546 A0A0U1RQV1 116 aa5.41□□□□□ -1.54
CCDC93-208ENST00000474546 PRB2P02812 416 aaPredicted RBP5.41□□□□□ -1.54
CCDC93-208ENST00000474546 SPART-AS1P0CW21 52 aa5.41□□□□□ -1.54
CCDC93-208ENST00000474546 SORL1Q92673 2214 aa5.4□□□□□ -1.54
CCDC93-208ENST00000474546 TRAV10A0A0B4J240 114 aa5.4□□□□□ -1.54
CCDC93-208ENST00000474546 LINC01006Q8NI28 216 aa5.4□□□□□ -1.54
CCDC93-208ENST00000474546 RMI2Q96E14 147 aa5.4□□□□□ -1.54
CCDC93-208ENST00000474546 C1orf43Q9BWL3 253 aa5.4□□□□□ -1.54
CCDC93-208ENST00000474546 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.55
CCDC93-208ENST00000474546 PRR3P79522 188 aaKnown RBP5.39□□□□□ -1.55
CCDC93-208ENST00000474546 UNQ6190/PRO20217Q6UXQ8 127 aa5.39□□□□□ -1.55
CCDC93-208ENST00000474546 LINC00528Q8N1L1 170 aa5.39□□□□□ -1.55
CCDC93-208ENST00000474546 OCR1Q9BZK8 76 aa5.39□□□□□ -1.55
CCDC93-208ENST00000474546 SNURFQ9Y675 71 aa5.39□□□□□ -1.55
CCDC93-208ENST00000474546 X6R8D5 127 aa5.39□□□□□ -1.55
CCDC93-208ENST00000474546 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
CCDC93-208ENST00000474546 LINC00336Q6ZUF6 198 aa5.38□□□□□ -1.55
CCDC93-208ENST00000474546 CAMK2N2Q96S95 79 aa5.38□□□□□ -1.55
CCDC93-208ENST00000474546 TM2D3Q9BRN9 247 aa5.38□□□□□ -1.55
CCDC93-208ENST00000474546 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
CCDC93-208ENST00000474546 H3BPC8 53 aa5.37□□□□□ -1.55
CCDC93-208ENST00000474546 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
CCDC93-208ENST00000474546 VPREB1P12018 145 aa5.37□□□□□ -1.55
CCDC93-208ENST00000474546 CLPSL2Q6UWE3 100 aa5.37□□□□□ -1.55
CCDC93-208ENST00000474546 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-208ENST00000474546 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
CCDC93-208ENST00000474546 Q1T7F1 81 aa5.36□□□□□ -1.55
CCDC93-208ENST00000474546 C1orf195Q5TG92 126 aa5.36□□□□□ -1.55
CCDC93-208ENST00000474546 NKAPP1Q8N9T2 125 aa5.36□□□□□ -1.55
CCDC93-208ENST00000474546 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
CCDC93-208ENST00000474546 IGLV10-54A0A075B6I4 117 aa5.35□□□□□ -1.55
CCDC93-208ENST00000474546 C9orf116Q5BN46 136 aaPredicted RBP5.35□□□□□ -1.55
CCDC93-208ENST00000474546 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
CCDC93-208ENST00000474546 ETDCA0A1B0GVM5 59 aa5.34□□□□□ -1.55
CCDC93-208ENST00000474546 RPL37AP8A6NKH3 93 aa5.34□□□□□ -1.55
CCDC93-208ENST00000474546 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
CCDC93-208ENST00000474546 CYP4F30PQ9H0H9 118 aa5.34□□□□□ -1.55
CCDC93-208ENST00000474546 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
CCDC93-208ENST00000474546 TLX1NBP0CAT3 122 aa5.33□□□□□ -1.56
CCDC93-208ENST00000474546 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
CCDC93-208ENST00000474546 WFDC10AQ9H1F0 79 aa5.33□□□□□ -1.56
CCDC93-208ENST00000474546 KLK12Q9UKR0 248 aa5.33□□□□□ -1.56
CCDC93-208ENST00000474546 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
CCDC93-208ENST00000474546 MP68P56378 58 aa5.32□□□□□ -1.56
CCDC93-208ENST00000474546 Q6ZTC4 211 aa5.32□□□□□ -1.56
CCDC93-208ENST00000474546 MRPL55Q7Z7F7 128 aaKnown RBP5.32□□□□□ -1.56
CCDC93-208ENST00000474546 Q8NBF4 154 aa5.32□□□□□ -1.56
CCDC93-208ENST00000474546 SPRR4Q96PI1 79 aa5.32□□□□□ -1.56
CCDC93-208ENST00000474546 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
CCDC93-208ENST00000474546 hDV103S1A0JD37 113 aa5.31□□□□□ -1.56
CCDC93-208ENST00000474546 Q8NDZ9 215 aa5.31□□□□□ -1.56
CCDC93-208ENST00000474546 A0A096LPF7 62 aa5.3□□□□□ -1.56
CCDC93-208ENST00000474546 SYCNQ0VAF6 134 aa5.3□□□□□ -1.56
CCDC93-208ENST00000474546 Q6ZRX8 168 aa5.3□□□□□ -1.56
CCDC93-208ENST00000474546 SPANXA2-OT1Q8N9U9 137 aa5.3□□□□□ -1.56
CCDC93-208ENST00000474546 Q8NAQ8 132 aa5.3□□□□□ -1.56
CCDC93-208ENST00000474546 B9D2Q9BPU9 175 aa5.3□□□□□ -1.56
CCDC93-208ENST00000474546 PKIGQ9Y2B9 76 aa5.3□□□□□ -1.56
CCDC93-208ENST00000474546 HCG22E2RYF7 251 aa5.29□□□□□ -1.56
CCDC93-208ENST00000474546 M0R2N4 97 aa5.29□□□□□ -1.56
CCDC93-208ENST00000474546 C1orf137Q5JT78 98 aa5.29□□□□□ -1.56
CCDC93-208ENST00000474546 Q6ZRU5 148 aa5.29□□□□□ -1.56
CCDC93-208ENST00000474546 XAGE1AQ9HD64 81 aa5.29□□□□□ -1.56
CCDC93-208ENST00000474546 DEFB135Q30KP9 77 aa5.28□□□□□ -1.56
CCDC93-208ENST00000474546 LINC01556Q5JQF7 62 aa5.28□□□□□ -1.56
CCDC93-208ENST00000474546 SCXQ7RTU7 201 aa5.28□□□□□ -1.56
CCDC93-208ENST00000474546 LIMD2Q9BT23 127 aa5.28□□□□□ -1.56
CCDC93-208ENST00000474546 SPRR1AP35321 89 aa5.27□□□□□ -1.57
CCDC93-208ENST00000474546 TNP2Q05952 138 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms