RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 M0R2N4 97 aa13.72□□□□□ -0.21
SMIM11A-204ENST00000474455 RBM3P98179 157 aaKnown RBP13.72□□□□□ -0.21
SMIM11A-204ENST00000474455 KRTAP26-1Q6PEX3 210 aa13.72□□□□□ -0.21
SMIM11A-204ENST00000474455 C6orf223Q8N319 242 aa13.72□□□□□ -0.21
SMIM11A-204ENST00000474455 NDUFC2-KCTD14E9PQ53 114 aa13.71□□□□□ -0.21
SMIM11A-204ENST00000474455 PDE6GP18545 87 aa13.7□□□□□ -0.22
SMIM11A-204ENST00000474455 Q6ZQT0 140 aa13.7□□□□□ -0.22
SMIM11A-204ENST00000474455 IGKV2D-24A0A075B6R9 120 aa13.7□□□□□ -0.22
SMIM11A-204ENST00000474455 LINC00476Q8WZB0 136 aa13.7□□□□□ -0.22
SMIM11A-204ENST00000474455 NBDYA0A0U1RRE5 68 aa13.69□□□□□ -0.22
SMIM11A-204ENST00000474455 GHRHP01286 108 aa13.69□□□□□ -0.22
SMIM11A-204ENST00000474455 IGLV6-57P01721 117 aa13.68□□□□□ -0.22
SMIM11A-204ENST00000474455 SPAG11BQ08648 103 aa13.68□□□□□ -0.22
SMIM11A-204ENST00000474455 C9orf116Q5BN46 136 aaPredicted RBP13.68□□□□□ -0.22
SMIM11A-204ENST00000474455 LOC107984640A0A0U1RRK4 108 aa13.67□□□□□ -0.22
SMIM11A-204ENST00000474455 CYSTM1Q9H1C7 97 aa13.67□□□□□ -0.22
SMIM11A-204ENST00000474455 GVQW2A0A096LPI5 108 aaPredicted RBP13.67□□□□□ -0.22
SMIM11A-204ENST00000474455 Q8NDZ9 215 aa13.67□□□□□ -0.22
SMIM11A-204ENST00000474455 DPH3Q96FX2 82 aa13.67□□□□□ -0.22
SMIM11A-204ENST00000474455 C1orf43Q9BWL3 253 aa13.66□□□□□ -0.22
SMIM11A-204ENST00000474455 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
SMIM11A-204ENST00000474455 UNQ6190/PRO20217Q6UXQ8 127 aa13.63□□□□□ -0.23
SMIM11A-204ENST00000474455 FAM19A1Q7Z5A9 133 aa13.63□□□□□ -0.23
SMIM11A-204ENST00000474455 FRAS1Q86XX4 4008 aa13.63□□□□□ -0.23
SMIM11A-204ENST00000474455 TRAV23DV6A0A075B6W5 121 aa13.63□□□□□ -0.23
SMIM11A-204ENST00000474455 LAMTOR3Q9UHA4 124 aa13.63□□□□□ -0.23
SMIM11A-204ENST00000474455 KMT2CQ8NEZ4 4911 aaKnown RBP13.62□□□□□ -0.23
SMIM11A-204ENST00000474455 DSCR8Q96T75 97 aa13.62□□□□□ -0.23
SMIM11A-204ENST00000474455 C10orf25Q5T742 122 aa13.61□□□□□ -0.23
SMIM11A-204ENST00000474455 Q6ZR54 194 aa13.59□□□□□ -0.23
SMIM11A-204ENST00000474455 TRAV7A0A075B6U4 112 aa13.59□□□□□ -0.23
SMIM11A-204ENST00000474455 TRBV7-6A0A0J9YX20 115 aa13.59□□□□□ -0.23
SMIM11A-204ENST00000474455 CXCL6P80162 114 aa13.58□□□□□ -0.24
SMIM11A-204ENST00000474455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.58□□□□□ -0.24
SMIM11A-204ENST00000474455 DIRC1Q969H9 104 aa13.58□□□□□ -0.24
SMIM11A-204ENST00000474455 DNAH17Q9UFH2 4485 aa13.58□□□□□ -0.24
SMIM11A-204ENST00000474455 C5orf47Q569G3 176 aa13.57□□□□□ -0.24
SMIM11A-204ENST00000474455 LINC01547P58512 204 aaPredicted RBP13.56□□□□□ -0.24
SMIM11A-204ENST00000474455 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
SMIM11A-204ENST00000474455 Q6ZQY7 126 aa13.55□□□□□ -0.24
SMIM11A-204ENST00000474455 Q6ZVQ6 151 aa13.55□□□□□ -0.24
SMIM11A-204ENST00000474455 HIGD2BQ4VC39 106 aa13.55□□□□□ -0.24
SMIM11A-204ENST00000474455 Q6ZRN7 208 aaPredicted RBP13.54□□□□□ -0.24
SMIM11A-204ENST00000474455 RMI2Q96E14 147 aa13.54□□□□□ -0.24
SMIM11A-204ENST00000474455 COX7BP24311 80 aa13.53□□□□□ -0.24
SMIM11A-204ENST00000474455 RYR2Q92736 4967 aa13.52□□□□□ -0.24
SMIM11A-204ENST00000474455 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.25
SMIM11A-204ENST00000474455 PSCAO43653 123 aa13.51□□□□□ -0.25
SMIM11A-204ENST00000474455 TRBV7-4A0A0J9YYF1 115 aa13.5□□□□□ -0.25
SMIM11A-204ENST00000474455 ZNF73O43830 326 aaPredicted RBP13.5□□□□□ -0.25
SMIM11A-204ENST00000474455 HAMPP81172 84 aa13.5□□□□□ -0.25
SMIM11A-204ENST00000474455 ELOF1P60002 83 aaKnown RBP13.49□□□□□ -0.25
SMIM11A-204ENST00000474455 C20orf197Q8N268 126 aa13.49□□□□□ -0.25
SMIM11A-204ENST00000474455 HECTD4Q9Y4D8 3996 aa13.48□□□□□ -0.25
SMIM11A-204ENST00000474455 FAT2Q9NYQ8 4349 aa13.48□□□□□ -0.25
SMIM11A-204ENST00000474455 LCE6AA0A183 80 aa13.46□□□□□ -0.26
SMIM11A-204ENST00000474455 FAM236DA0A1B0GTK5 79 aa13.46□□□□□ -0.26
SMIM11A-204ENST00000474455 FAM236CP0DP71 79 aa13.46□□□□□ -0.26
SMIM11A-204ENST00000474455 M0R378 163 aa13.45□□□□□ -0.26
SMIM11A-204ENST00000474455 OXTP01178 125 aa13.45□□□□□ -0.26
SMIM11A-204ENST00000474455 KLKP1Q107X0 134 aa13.45□□□□□ -0.26
SMIM11A-204ENST00000474455 C1orf134Q5TEV5 83 aa13.45□□□□□ -0.26
SMIM11A-204ENST00000474455 LRCOL1A6NCL2 159 aa13.44□□□□□ -0.26
SMIM11A-204ENST00000474455 DNAH11Q96DT5 4516 aa13.44□□□□□ -0.26
SMIM11A-204ENST00000474455 VPREB1P12018 145 aa13.43□□□□□ -0.26
SMIM11A-204ENST00000474455 XAGE1AQ9HD64 81 aa13.42□□□□□ -0.26
SMIM11A-204ENST00000474455 F8WDY8 70 aa13.41□□□□□ -0.26
SMIM11A-204ENST00000474455 SERP1Q9Y6X1 66 aa13.41□□□□□ -0.26
SMIM11A-204ENST00000474455 H7BZZ5 65 aa13.4□□□□□ -0.26
SMIM11A-204ENST00000474455 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
SMIM11A-204ENST00000474455 EPM2AB3EWF7 344 aa13.4□□□□□ -0.26
SMIM11A-204ENST00000474455 Q6ZRU5 148 aa13.4□□□□□ -0.26
SMIM11A-204ENST00000474455 RYR3Q15413 4870 aa13.39□□□□□ -0.27
SMIM11A-204ENST00000474455 RTL8CO15255 209 aa13.39□□□□□ -0.27
SMIM11A-204ENST00000474455 NDUFC1O43677 76 aa13.39□□□□□ -0.27
SMIM11A-204ENST00000474455 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.38□□□□□ -0.27
SMIM11A-204ENST00000474455 LINC00528Q8N1L1 170 aa13.38□□□□□ -0.27
SMIM11A-204ENST00000474455 DNAH5Q8TE73 4624 aa13.37□□□□□ -0.27
SMIM11A-204ENST00000474455 FUSP35637 526 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMIM11A-204ENST00000474455 TNP2Q05952 138 aa13.36□□□□□ -0.27
SMIM11A-204ENST00000474455 Q5XG85 94 aa13.36□□□□□ -0.27
SMIM11A-204ENST00000474455 A0A087WTM6 91 aa13.35□□□□□ -0.27
SMIM11A-204ENST00000474455 PKD1P98161 4303 aa13.34□□□□□ -0.27
SMIM11A-204ENST00000474455 SYCNQ0VAF6 134 aa13.34□□□□□ -0.27
SMIM11A-204ENST00000474455 ERC2-IT1O76042 136 aa13.33□□□□□ -0.27
SMIM11A-204ENST00000474455 ATP5EP56381 51 aaPredicted RBP13.33□□□□□ -0.28
SMIM11A-204ENST00000474455 C14orf177Q52M58 125 aa13.28□□□□□ -0.28
SMIM11A-204ENST00000474455 C4orf26Q17RF5 130 aa13.27□□□□□ -0.28
SMIM11A-204ENST00000474455 A0A1B0GW54 56 aa13.27□□□□□ -0.29
SMIM11A-204ENST00000474455 NREPQ16612 68 aa13.27□□□□□ -0.29
SMIM11A-204ENST00000474455 CNBPP62633 177 aaKnown RBP13.25□□□□□ -0.29
SMIM11A-204ENST00000474455 SCXQ7RTU7 201 aa13.25□□□□□ -0.29
SMIM11A-204ENST00000474455 KCNQ1DNQ9H478 68 aa13.25□□□□□ -0.29
SMIM11A-204ENST00000474455 SNURFQ9Y675 71 aa13.25□□□□□ -0.29
SMIM11A-204ENST00000474455 F8WEM9 126 aa13.25□□□□□ -0.29
SMIM11A-204ENST00000474455 BPY2O14599 106 aa13.25□□□□□ -0.29
SMIM11A-204ENST00000474455 Q6ZRP5 223 aa13.25□□□□□ -0.29
SMIM11A-204ENST00000474455 IGKV4-1P06312 121 aa13.22□□□□□ -0.29
SMIM11A-204ENST00000474455 HRCT1Q6UXD1 115 aa13.22□□□□□ -0.29
SMIM11A-204ENST00000474455 PKHD1P08F94 4074 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms