RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
VTI1A-203ENST00000472892 COLCA2A8K830 154 aa8.68□□□□□ -1.02
VTI1A-203ENST00000472892 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
VTI1A-203ENST00000472892 IGKCP01834 107 aa8.68□□□□□ -1.02
VTI1A-203ENST00000472892 ANKRD39Q53RE8 183 aa8.68□□□□□ -1.02
VTI1A-203ENST00000472892 GAGE2AQ6NT46 116 aa8.68□□□□□ -1.02
VTI1A-203ENST00000472892 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-203ENST00000472892 NDUFC2O95298 119 aa8.67□□□□□ -1.02
VTI1A-203ENST00000472892 SPINK1P00995 79 aa8.67□□□□□ -1.02
VTI1A-203ENST00000472892 LGALS3P17931 250 aaKnown RBP8.67□□□□□ -1.02
VTI1A-203ENST00000472892 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
VTI1A-203ENST00000472892 Q6ZRX8 168 aa8.66□□□□□ -1.02
VTI1A-203ENST00000472892 Q9BRP9 147 aa8.66□□□□□ -1.02
VTI1A-203ENST00000472892 MIEN1Q9BRT3 115 aa8.65□□□□□ -1.02
VTI1A-203ENST00000472892 S100A7L2Q5SY68 101 aa8.64□□□□□ -1.03
VTI1A-203ENST00000472892 ADAMTSL4-AS1Q5T5F5 129 aa8.64□□□□□ -1.03
VTI1A-203ENST00000472892 SSBP3-AS1Q7Z2R9 100 aa8.64□□□□□ -1.03
VTI1A-203ENST00000472892 SLC7A5P1Q8MH63 180 aa8.64□□□□□ -1.03
VTI1A-203ENST00000472892 A0A0J9YXY3 114 aa8.63□□□□□ -1.03
VTI1A-203ENST00000472892 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
VTI1A-203ENST00000472892 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
VTI1A-203ENST00000472892 IGLV9-49A0A0B4J1Y8 123 aa8.62□□□□□ -1.03
VTI1A-203ENST00000472892 KRTAP4-8A0A0G2JLE6 195 aa8.62□□□□□ -1.03
VTI1A-203ENST00000472892 E9PLD3 99 aa8.62□□□□□ -1.03
VTI1A-203ENST00000472892 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
VTI1A-203ENST00000472892 MOBPQ13875 183 aa8.62□□□□□ -1.03
VTI1A-203ENST00000472892 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
VTI1A-203ENST00000472892 JOSD1Q15040 202 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-203ENST00000472892 NPC2P61916 151 aa8.6□□□□□ -1.03
VTI1A-203ENST00000472892 ZNF73O43830 326 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-203ENST00000472892 Q8N377 158 aa8.59□□□□□ -1.03
VTI1A-203ENST00000472892 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
VTI1A-203ENST00000472892 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
VTI1A-203ENST00000472892 ASB16-AS1Q495Z4 193 aa8.57□□□□□ -1.04
VTI1A-203ENST00000472892 LITAFQ99732 161 aa8.57□□□□□ -1.04
VTI1A-203ENST00000472892 SLC25A20O43772 301 aa8.56□□□□□ -1.04
VTI1A-203ENST00000472892 CBY1Q9Y3M2 126 aa8.56□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BKO60814 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BJP06899 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BOP23527 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BBP33778 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BDP58876 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BCP62807 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST2H2BEQ16778 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-203ENST00000472892 ST20-AS1Q8NBB2 130 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BHQ93079 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BNQ99877 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 HIST1H2BMQ99879 126 aa8.55□□□□□ -1.04
VTI1A-203ENST00000472892 TIMM17BO60830 172 aa8.54□□□□□ -1.04
VTI1A-203ENST00000472892 HINT1P49773 126 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-203ENST00000472892 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
VTI1A-203ENST00000472892 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
VTI1A-203ENST00000472892 PET117Q6UWS5 81 aa8.53□□□□□ -1.04
VTI1A-203ENST00000472892 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.05
VTI1A-203ENST00000472892 SPRR1BP22528 89 aa8.51□□□□□ -1.05
VTI1A-203ENST00000472892 OR13C6PQ8NH95 151 aa8.51□□□□□ -1.05
VTI1A-203ENST00000472892 SEC61BP60468 96 aaKnown RBP8.5□□□□□ -1.05
VTI1A-203ENST00000472892 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
VTI1A-203ENST00000472892 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
VTI1A-203ENST00000472892 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
VTI1A-203ENST00000472892 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
VTI1A-203ENST00000472892 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
VTI1A-203ENST00000472892 TTTY13Q9BZ97 58 aa8.48□□□□□ -1.05
VTI1A-203ENST00000472892 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
VTI1A-203ENST00000472892 SLC25A34Q6PIV7 304 aa8.47□□□□□ -1.05
VTI1A-203ENST00000472892 ELOF1P60002 83 aaKnown RBP8.45□□□□□ -1.06
VTI1A-203ENST00000472892 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
VTI1A-203ENST00000472892 COX7BP24311 80 aa8.44□□□□□ -1.06
VTI1A-203ENST00000472892 C6orf99Q4VX62 202 aa8.44□□□□□ -1.06
VTI1A-203ENST00000472892 LAMTOR3Q9UHA4 124 aa8.44□□□□□ -1.06
VTI1A-203ENST00000472892 TRBV7-6A0A0J9YX20 115 aa8.42□□□□□ -1.06
VTI1A-203ENST00000472892 KRTDAPP60985 99 aa8.42□□□□□ -1.06
VTI1A-203ENST00000472892 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
VTI1A-203ENST00000472892 LIMD2Q9BT23 127 aa8.41□□□□□ -1.06
VTI1A-203ENST00000472892 LINC01547P58512 204 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-203ENST00000472892 TAL2Q16559 108 aa8.4□□□□□ -1.06
VTI1A-203ENST00000472892 LCE1DQ5T752 114 aa8.4□□□□□ -1.06
VTI1A-203ENST00000472892 SCGB1D4Q6XE38 83 aa8.4□□□□□ -1.06
VTI1A-203ENST00000472892 TEX49A0A1B0GTD5 131 aa8.39□□□□□ -1.07
VTI1A-203ENST00000472892 IFITM1P13164 125 aa8.39□□□□□ -1.07
VTI1A-203ENST00000472892 CD164Q04900 197 aa8.39□□□□□ -1.07
VTI1A-203ENST00000472892 COPS9Q8WXC6 57 aa8.39□□□□□ -1.07
VTI1A-203ENST00000472892 Q6ZVH6 145 aa8.38□□□□□ -1.07
VTI1A-203ENST00000472892 DEFB105AQ8NG35 78 aa8.38□□□□□ -1.07
VTI1A-203ENST00000472892 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
VTI1A-203ENST00000472892 C20orf202A1L168 122 aa8.37□□□□□ -1.07
VTI1A-203ENST00000472892 Q1RN00 199 aa8.37□□□□□ -1.07
VTI1A-203ENST00000472892 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
VTI1A-203ENST00000472892 PRO1933Q9H354 126 aa8.37□□□□□ -1.07
VTI1A-203ENST00000472892 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
VTI1A-203ENST00000472892 A6NDN8 102 aa8.35□□□□□ -1.07
VTI1A-203ENST00000472892 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
VTI1A-203ENST00000472892 IGLV5-48A0A075B6I7 105 aa8.34□□□□□ -1.07
VTI1A-203ENST00000472892 Q5XG85 94 aa8.34□□□□□ -1.07
VTI1A-203ENST00000472892 ATOH7Q8N100 152 aa8.34□□□□□ -1.07
VTI1A-203ENST00000472892 A4D1N5 150 aa8.33□□□□□ -1.08
VTI1A-203ENST00000472892 AKR1D1P51857 326 aa8.33□□□□□ -1.08
VTI1A-203ENST00000472892 H7C2G1 150 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms