RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
HIF3A-206ENST00000472815 hADV29S1A0JD25 119 aa9.3□□□□□ -0.92
HIF3A-206ENST00000472815 GHRHP01286 108 aa9.3□□□□□ -0.92
HIF3A-206ENST00000472815 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
HIF3A-206ENST00000472815 TNP2Q05952 138 aa9.3□□□□□ -0.92
HIF3A-206ENST00000472815 ETDBQ3ZM63 59 aa9.3□□□□□ -0.92
HIF3A-206ENST00000472815 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
HIF3A-206ENST00000472815 KRTAP7-1Q8IUC3 87 aa9.29□□□□□ -0.92
HIF3A-206ENST00000472815 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
HIF3A-206ENST00000472815 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
HIF3A-206ENST00000472815 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
HIF3A-206ENST00000472815 H3BQ85 93 aa9.28□□□□□ -0.92
HIF3A-206ENST00000472815 BAALC-AS2P0C853 105 aa9.28□□□□□ -0.92
HIF3A-206ENST00000472815 CHTF8P0CG12 524 aa9.28□□□□□ -0.92
HIF3A-206ENST00000472815 J3QR89 54 aa9.28□□□□□ -0.92
HIF3A-206ENST00000472815 RYR2Q92736 4967 aa9.27□□□□□ -0.93
HIF3A-206ENST00000472815 ETDCA0A1B0GVM5 59 aa9.27□□□□□ -0.93
HIF3A-206ENST00000472815 K7ERU9 68 aa9.27□□□□□ -0.93
HIF3A-206ENST00000472815 SPACA4Q8TDM5 124 aa9.27□□□□□ -0.93
HIF3A-206ENST00000472815 DNAH2Q9P225 4427 aa9.26□□□□□ -0.93
HIF3A-206ENST00000472815 UBE2BP63146 152 aa9.26□□□□□ -0.93
HIF3A-206ENST00000472815 REG3GQ6UW15 175 aa9.26□□□□□ -0.93
HIF3A-206ENST00000472815 FRAS1Q86XX4 4008 aa9.26□□□□□ -0.93
HIF3A-206ENST00000472815 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
HIF3A-206ENST00000472815 SPRR1AP35321 89 aa9.25□□□□□ -0.93
HIF3A-206ENST00000472815 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
HIF3A-206ENST00000472815 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
HIF3A-206ENST00000472815 LINC00528Q8N1L1 170 aa9.25□□□□□ -0.93
HIF3A-206ENST00000472815 PPDPFLQ8WWR9 84 aa9.25□□□□□ -0.93
HIF3A-206ENST00000472815 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
HIF3A-206ENST00000472815 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.23□□□□□ -0.93
HIF3A-206ENST00000472815 Q6ZRX8 168 aa9.23□□□□□ -0.93
HIF3A-206ENST00000472815 RYR3Q15413 4870 aa9.22□□□□□ -0.93
HIF3A-206ENST00000472815 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
HIF3A-206ENST00000472815 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.22□□□□□ -0.93
HIF3A-206ENST00000472815 KRTAP4-16G5E9R7 235 aaPredicted RBP9.21□□□□□ -0.94
HIF3A-206ENST00000472815 PHF5AQ7RTV0 110 aaKnown RBP9.21□□□□□ -0.94
HIF3A-206ENST00000472815 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
HIF3A-206ENST00000472815 B5MCH6 92 aa9.2□□□□□ -0.94
HIF3A-206ENST00000472815 Q6ZQY7 126 aa9.2□□□□□ -0.94
HIF3A-206ENST00000472815 PANO1I0J062 215 aa9.19□□□□□ -0.94
HIF3A-206ENST00000472815 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
HIF3A-206ENST00000472815 PLAC8Q9NZF1 115 aa9.19□□□□□ -0.94
HIF3A-206ENST00000472815 HECTD4Q9Y4D8 3996 aa9.18□□□□□ -0.94
HIF3A-206ENST00000472815 DNAH17Q9UFH2 4485 aa9.18□□□□□ -0.94
HIF3A-206ENST00000472815 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
HIF3A-206ENST00000472815 JMJD7-PLA2G4BH0Y9G9 81 aa9.17□□□□□ -0.94
HIF3A-206ENST00000472815 KRTAP10-2P60368 255 aa9.17□□□□□ -0.94
HIF3A-206ENST00000472815 FAM19A1Q7Z5A9 133 aa9.17□□□□□ -0.94
HIF3A-206ENST00000472815 H0Y9J4 135 aa9.14□□□□□ -0.95
HIF3A-206ENST00000472815 LAMTOR3Q9UHA4 124 aa9.14□□□□□ -0.95
HIF3A-206ENST00000472815 FAT2Q9NYQ8 4349 aa9.13□□□□□ -0.95
HIF3A-206ENST00000472815 Q9BRP9 147 aa9.13□□□□□ -0.95
HIF3A-206ENST00000472815 BCE1O60756 84 aa9.12□□□□□ -0.95
HIF3A-206ENST00000472815 UBE2AP49459 152 aa9.12□□□□□ -0.95
HIF3A-206ENST00000472815 OBSCN-AS1Q96MR7 158 aa9.11□□□□□ -0.95
HIF3A-206ENST00000472815 PRLHP81277 87 aa9.1□□□□□ -0.95
HIF3A-206ENST00000472815 RBM3P98179 157 aaKnown RBP9.08□□□□□ -0.96
HIF3A-206ENST00000472815 Q6ZSA8 131 aa9.08□□□□□ -0.96
HIF3A-206ENST00000472815 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
HIF3A-206ENST00000472815 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
HIF3A-206ENST00000472815 C21orf62-AS1Q17RA5 79 aa9.08□□□□□ -0.96
HIF3A-206ENST00000472815 KRTAP11-1Q8IUC1 163 aa9.08□□□□□ -0.96
HIF3A-206ENST00000472815 PKD1P98161 4303 aa9.08□□□□□ -0.96
HIF3A-206ENST00000472815 NDUFV3P56181 108 aaKnown RBP9.07□□□□□ -0.96
HIF3A-206ENST00000472815 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
HIF3A-206ENST00000472815 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
HIF3A-206ENST00000472815 FAM240AA0A1B0GVK7 77 aa9.06□□□□□ -0.96
HIF3A-206ENST00000472815 ACYP1P07311 99 aa9.06□□□□□ -0.96
HIF3A-206ENST00000472815 PDE6GP18545 87 aa9.06□□□□□ -0.96
HIF3A-206ENST00000472815 DSCR8Q96T75 97 aa9.06□□□□□ -0.96
HIF3A-206ENST00000472815 C14orf132Q9NPU4 83 aa9.06□□□□□ -0.96
HIF3A-206ENST00000472815 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
HIF3A-206ENST00000472815 CIRBP-AS1Q8TBR5 109 aa9.05□□□□□ -0.96
HIF3A-206ENST00000472815 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
HIF3A-206ENST00000472815 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
HIF3A-206ENST00000472815 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
HIF3A-206ENST00000472815 ERC2-IT1O76042 136 aa9.04□□□□□ -0.96
HIF3A-206ENST00000472815 SCXQ7RTU7 201 aa9.04□□□□□ -0.96
HIF3A-206ENST00000472815 Q8N377 158 aa9.04□□□□□ -0.96
HIF3A-206ENST00000472815 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
HIF3A-206ENST00000472815 PSORS1C2Q9UIG4 136 aa9.04□□□□□ -0.96
HIF3A-206ENST00000472815 A0A1B0GV72 72 aa9.03□□□□□ -0.96
HIF3A-206ENST00000472815 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
HIF3A-206ENST00000472815 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.96
HIF3A-206ENST00000472815 LINC01547P58512 204 aaPredicted RBP9.02□□□□□ -0.97
HIF3A-206ENST00000472815 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.97
HIF3A-206ENST00000472815 ST20-AS1Q8NBB2 130 aa9.02□□□□□ -0.97
HIF3A-206ENST00000472815 LOC110117498A0A087WWA1 95 aa9.01□□□□□ -0.97
HIF3A-206ENST00000472815 F8WEM9 126 aa9□□□□□ -0.97
HIF3A-206ENST00000472815 CCKP06307 115 aa9□□□□□ -0.97
HIF3A-206ENST00000472815 ZNF706Q9Y5V0 76 aaPredicted RBP9□□□□□ -0.97
HIF3A-206ENST00000472815 PKHD1P08F94 4074 aa8.99□□□□□ -0.97
HIF3A-206ENST00000472815 DNAH5Q8TE73 4624 aa8.98□□□□□ -0.97
HIF3A-206ENST00000472815 ZNF861PO60384 105 aa8.98□□□□□ -0.97
HIF3A-206ENST00000472815 TRBV7-4A0A0J9YYF1 115 aa8.97□□□□□ -0.97
HIF3A-206ENST00000472815 Q6ZQT0 140 aa8.97□□□□□ -0.97
HIF3A-206ENST00000472815 IGLV7-43P04211 117 aa8.96□□□□□ -0.98
HIF3A-206ENST00000472815 SPRR1BP22528 89 aa8.96□□□□□ -0.98
HIF3A-206ENST00000472815 C3orf22Q8N5N4 141 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms