RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 TEN1Q86WV5 123 aa16.46■□□□□ 0.23
U2AF1-208ENST00000471250 RPL37AP8A6NKH3 93 aa16.46■□□□□ 0.23
U2AF1-208ENST00000471250 ELOF1P60002 83 aaKnown RBP16.46■□□□□ 0.23
U2AF1-208ENST00000471250 DNAH17Q9UFH2 4485 aa16.45■□□□□ 0.22
U2AF1-208ENST00000471250 PRYO14603 147 aa16.45■□□□□ 0.22
U2AF1-208ENST00000471250 SNCGO76070 127 aa16.44■□□□□ 0.22
U2AF1-208ENST00000471250 BAALC-AS2P0C853 105 aa16.44■□□□□ 0.22
U2AF1-208ENST00000471250 OCIAD2Q56VL3 154 aa16.43■□□□□ 0.22
U2AF1-208ENST00000471250 FUSP35637 526 aaKnown RBP eCLIP16.43■□□□□ 0.22
U2AF1-208ENST00000471250 hADV29S1A0JD25 119 aa16.42■□□□□ 0.22
U2AF1-208ENST00000471250 IGLV5-52A0A0A0MRZ9 124 aa16.41■□□□□ 0.22
U2AF1-208ENST00000471250 PANO1I0J062 215 aa16.4■□□□□ 0.22
U2AF1-208ENST00000471250 SPRR1AP35321 89 aa16.4■□□□□ 0.22
U2AF1-208ENST00000471250 LINC00528Q8N1L1 170 aa16.4■□□□□ 0.22
U2AF1-208ENST00000471250 SPACA4Q8TDM5 124 aa16.39■□□□□ 0.21
U2AF1-208ENST00000471250 ORMDL1Q9P0S3 153 aa16.38■□□□□ 0.21
U2AF1-208ENST00000471250 LCE6AA0A183 80 aa16.37■□□□□ 0.21
U2AF1-208ENST00000471250 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.37■□□□□ 0.21
U2AF1-208ENST00000471250 HYDINQ4G0P3 5121 aa16.37■□□□□ 0.21
U2AF1-208ENST00000471250 KRTAP4-16G5E9R7 235 aaPredicted RBP16.37■□□□□ 0.21
U2AF1-208ENST00000471250 PPDPFLQ8WWR9 84 aa16.37■□□□□ 0.21
U2AF1-208ENST00000471250 K7ERU9 68 aa16.34■□□□□ 0.21
U2AF1-208ENST00000471250 PHF5AQ7RTV0 110 aaKnown RBP16.34■□□□□ 0.21
U2AF1-208ENST00000471250 EPM2AB3EWF7 344 aa16.34■□□□□ 0.21
U2AF1-208ENST00000471250 FRAS1Q86XX4 4008 aa16.33■□□□□ 0.21
U2AF1-208ENST00000471250 REG3GQ6UW15 175 aa16.33■□□□□ 0.2
U2AF1-208ENST00000471250 DPH3Q96FX2 82 aa16.33■□□□□ 0.2
U2AF1-208ENST00000471250 ETDCA0A1B0GVM5 59 aa16.32■□□□□ 0.2
U2AF1-208ENST00000471250 B5MCH6 92 aa16.32■□□□□ 0.2
U2AF1-208ENST00000471250 HECTD4Q9Y4D8 3996 aa16.32■□□□□ 0.2
U2AF1-208ENST00000471250 TEX49A0A1B0GTD5 131 aa16.3■□□□□ 0.2
U2AF1-208ENST00000471250 INAFM2P0DMQ5 153 aa16.3■□□□□ 0.2
U2AF1-208ENST00000471250 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.29■□□□□ 0.2
U2AF1-208ENST00000471250 Q6ZQY7 126 aa16.29■□□□□ 0.2
U2AF1-208ENST00000471250 Q6ZRX8 168 aa16.29■□□□□ 0.2
U2AF1-208ENST00000471250 KRTAP10-2P60368 255 aa16.28■□□□□ 0.2
U2AF1-208ENST00000471250 TMEM256-PLSCR3K7ERE1 68 aa16.27■□□□□ 0.2
U2AF1-208ENST00000471250 UBE2BP63146 152 aa16.27■□□□□ 0.2
U2AF1-208ENST00000471250 J3QR89 54 aa16.27■□□□□ 0.19
U2AF1-208ENST00000471250 KRTAP11-1Q8IUC1 163 aa16.25■□□□□ 0.19
U2AF1-208ENST00000471250 DHRS4-AS1Q9P1J3 65 aa16.25■□□□□ 0.19
U2AF1-208ENST00000471250 SACSQ9NZJ4 4579 aa16.25■□□□□ 0.19
U2AF1-208ENST00000471250 H3BQ85 93 aa16.24■□□□□ 0.19
U2AF1-208ENST00000471250 Q9BRP9 147 aa16.22■□□□□ 0.19
U2AF1-208ENST00000471250 PLAC8Q9NZF1 115 aa16.22■□□□□ 0.19
U2AF1-208ENST00000471250 DNAH11Q96DT5 4516 aa16.21■□□□□ 0.19
U2AF1-208ENST00000471250 GHRHP01286 108 aa16.2■□□□□ 0.18
U2AF1-208ENST00000471250 OBSCN-AS1Q96MR7 158 aa16.2■□□□□ 0.18
U2AF1-208ENST00000471250 FAM19A1Q7Z5A9 133 aa16.18■□□□□ 0.18
U2AF1-208ENST00000471250 FAT2Q9NYQ8 4349 aa16.15■□□□□ 0.18
U2AF1-208ENST00000471250 LINC00336Q6ZUF6 198 aa16.14■□□□□ 0.17
U2AF1-208ENST00000471250 SMCR5Q8TEV8 140 aa16.14■□□□□ 0.17
U2AF1-208ENST00000471250 JMJD7-PLA2G4BH0Y9G9 81 aa16.12■□□□□ 0.17
U2AF1-208ENST00000471250 PRLHP81277 87 aa16.11■□□□□ 0.17
U2AF1-208ENST00000471250 DNAH5Q8TE73 4624 aa16.11■□□□□ 0.17
U2AF1-208ENST00000471250 H0Y9J4 135 aa16.11■□□□□ 0.17
U2AF1-208ENST00000471250 ERC2-IT1O76042 136 aa16.11■□□□□ 0.17
U2AF1-208ENST00000471250 BCE1O60756 84 aa16.09■□□□□ 0.17
U2AF1-208ENST00000471250 FAM30AQ9NZY2 134 aa16.09■□□□□ 0.17
U2AF1-208ENST00000471250 LAMTOR3Q9UHA4 124 aa16.09■□□□□ 0.17
U2AF1-208ENST00000471250 LINC01547P58512 204 aaPredicted RBP16.08■□□□□ 0.17
U2AF1-208ENST00000471250 KRTAP10-1P60331 282 aa16.08■□□□□ 0.17
U2AF1-208ENST00000471250 C14orf132Q9NPU4 83 aa16.08■□□□□ 0.16
U2AF1-208ENST00000471250 PKD1P98161 4303 aa16.07■□□□□ 0.16
U2AF1-208ENST00000471250 Q6ZSA8 131 aa16.07■□□□□ 0.16
U2AF1-208ENST00000471250 Q8N377 158 aa16.06■□□□□ 0.16
U2AF1-208ENST00000471250 ST20-AS1Q8NBB2 130 aa16.06■□□□□ 0.16
U2AF1-208ENST00000471250 A0A1B0GV72 72 aa16.05■□□□□ 0.16
U2AF1-208ENST00000471250 IGLV5-48A0A075B6I7 105 aa16.05■□□□□ 0.16
U2AF1-208ENST00000471250 UBE2AP49459 152 aa16.05■□□□□ 0.16
U2AF1-208ENST00000471250 DEFB105AQ8NG35 78 aa16.05■□□□□ 0.16
U2AF1-208ENST00000471250 DNAH8Q96JB1 4490 aa16.04■□□□□ 0.16
U2AF1-208ENST00000471250 NDUFV3P56181 108 aaKnown RBP16.03■□□□□ 0.16
U2AF1-208ENST00000471250 HIGD2AQ9BW72 106 aa16.03■□□□□ 0.16
U2AF1-208ENST00000471250 RBM3P98179 157 aaKnown RBP16.02■□□□□ 0.16
U2AF1-208ENST00000471250 KRTAP13-1Q8IUC0 172 aa16.02■□□□□ 0.16
U2AF1-208ENST00000471250 CIRBP-AS1Q8TBR5 109 aa16.02■□□□□ 0.15
U2AF1-208ENST00000471250 VPS25Q9BRG1 176 aa16.02■□□□□ 0.15
U2AF1-208ENST00000471250 PSORS1C2Q9UIG4 136 aa16■□□□□ 0.15
U2AF1-208ENST00000471250 FAM240AA0A1B0GVK7 77 aa15.99■□□□□ 0.15
U2AF1-208ENST00000471250 RYR2Q92736 4967 aa15.99■□□□□ 0.15
U2AF1-208ENST00000471250 SCXQ7RTU7 201 aa15.97■□□□□ 0.15
U2AF1-208ENST00000471250 CDIP1Q9H305 208 aa15.96■□□□□ 0.15
U2AF1-208ENST00000471250 GAGE2AQ6NT46 116 aa15.95■□□□□ 0.14
U2AF1-208ENST00000471250 LOC110117498A0A087WWA1 95 aa15.95■□□□□ 0.14
U2AF1-208ENST00000471250 A0A1B0GVY2 172 aa15.95■□□□□ 0.14
U2AF1-208ENST00000471250 ACYP1P07311 99 aa15.95■□□□□ 0.14
U2AF1-208ENST00000471250 CCKP06307 115 aa15.94■□□□□ 0.14
U2AF1-208ENST00000471250 DSCR8Q96T75 97 aa15.93■□□□□ 0.14
U2AF1-208ENST00000471250 C1orf137Q5JT78 98 aa15.92■□□□□ 0.14
U2AF1-208ENST00000471250 Q6ZQT0 140 aa15.92■□□□□ 0.14
U2AF1-208ENST00000471250 TRBV7-4A0A0J9YYF1 115 aa15.9■□□□□ 0.14
U2AF1-208ENST00000471250 PDE6GP18545 87 aa15.9■□□□□ 0.14
U2AF1-208ENST00000471250 C3orf22Q8N5N4 141 aa15.89■□□□□ 0.13
U2AF1-208ENST00000471250 SMIM29Q86T20 159 aa15.89■□□□□ 0.13
U2AF1-208ENST00000471250 SPRR1BP22528 89 aa15.86■□□□□ 0.13
U2AF1-208ENST00000471250 HAMPP81172 84 aa15.86■□□□□ 0.13
U2AF1-208ENST00000471250 ZNF861PO60384 105 aa15.85■□□□□ 0.13
U2AF1-208ENST00000471250 KMT2CQ8NEZ4 4911 aaKnown RBP15.83■□□□□ 0.13
U2AF1-208ENST00000471250 IGLV7-43P04211 117 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms