RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 IGLV1-50A0A075B6I6 118 aa10.88□□□□□ -0.67
SMARCD3-206ENST00000470588 FAM168BA1KXE4 195 aa10.88□□□□□ -0.67
SMARCD3-206ENST00000470588 PRYO14603 147 aa10.88□□□□□ -0.67
SMARCD3-206ENST00000470588 SMCR5Q8TEV8 140 aa10.88□□□□□ -0.67
SMARCD3-206ENST00000470588 LAMTOR3Q9UHA4 124 aa10.88□□□□□ -0.67
SMARCD3-206ENST00000470588 RBM3P98179 157 aaKnown RBP10.88□□□□□ -0.67
SMARCD3-206ENST00000470588 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
SMARCD3-206ENST00000470588 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
SMARCD3-206ENST00000470588 KRTAP7-1Q8IUC3 87 aa10.87□□□□□ -0.67
SMARCD3-206ENST00000470588 TRBV7-7A0A0K0K1E9 115 aa10.85□□□□□ -0.67
SMARCD3-206ENST00000470588 A0A1B0GV72 72 aa10.85□□□□□ -0.67
SMARCD3-206ENST00000470588 C16orf90A8MZG2 172 aa10.85□□□□□ -0.67
SMARCD3-206ENST00000470588 M0R2N4 97 aa10.85□□□□□ -0.67
SMARCD3-206ENST00000470588 MRPL55Q7Z7F7 128 aaKnown RBP10.85□□□□□ -0.67
SMARCD3-206ENST00000470588 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
SMARCD3-206ENST00000470588 LOC110117498A0A087WWA1 95 aa10.85□□□□□ -0.67
SMARCD3-206ENST00000470588 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
SMARCD3-206ENST00000470588 SPRR1AP35321 89 aa10.84□□□□□ -0.67
SMARCD3-206ENST00000470588 LY6G6CO95867 125 aa10.83□□□□□ -0.68
SMARCD3-206ENST00000470588 PDE6GP18545 87 aa10.83□□□□□ -0.68
SMARCD3-206ENST00000470588 FAM19A5Q7Z5A7 132 aaPredicted RBP10.83□□□□□ -0.68
SMARCD3-206ENST00000470588 TENM2Q9NT68 2774 aa10.83□□□□□ -0.68
SMARCD3-206ENST00000470588 KRTAP4-16G5E9R7 235 aaPredicted RBP10.82□□□□□ -0.68
SMARCD3-206ENST00000470588 LINC00846Q9NV44 126 aa10.82□□□□□ -0.68
SMARCD3-206ENST00000470588 DHRS4-AS1Q9P1J3 65 aa10.82□□□□□ -0.68
SMARCD3-206ENST00000470588 LYSTQ99698 3801 aa10.82□□□□□ -0.68
SMARCD3-206ENST00000470588 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
SMARCD3-206ENST00000470588 A0A096LNI7 61 aa10.81□□□□□ -0.68
SMARCD3-206ENST00000470588 ETDCA0A1B0GVM5 59 aa10.81□□□□□ -0.68
SMARCD3-206ENST00000470588 B5MCH6 92 aa10.81□□□□□ -0.68
SMARCD3-206ENST00000470588 Q6ZQT0 140 aa10.81□□□□□ -0.68
SMARCD3-206ENST00000470588 DSCR8Q96T75 97 aa10.81□□□□□ -0.68
SMARCD3-206ENST00000470588 PKIGQ9Y2B9 76 aa10.81□□□□□ -0.68
SMARCD3-206ENST00000470588 Q6ZRN7 208 aaPredicted RBP10.8□□□□□ -0.68
SMARCD3-206ENST00000470588 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
SMARCD3-206ENST00000470588 NDUFV3P56181 108 aaKnown RBP10.8□□□□□ -0.68
SMARCD3-206ENST00000470588 Q6ZRX8 168 aa10.8□□□□□ -0.68
SMARCD3-206ENST00000470588 LINC00476Q8WZB0 136 aa10.8□□□□□ -0.68
SMARCD3-206ENST00000470588 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.79□□□□□ -0.68
SMARCD3-206ENST00000470588 Q6ZR54 194 aa10.79□□□□□ -0.68
SMARCD3-206ENST00000470588 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
SMARCD3-206ENST00000470588 Q6JHZ5 121 aa10.77□□□□□ -0.68
SMARCD3-206ENST00000470588 A0A1W2PNN7 141 aa10.77□□□□□ -0.69
SMARCD3-206ENST00000470588 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
SMARCD3-206ENST00000470588 REG3GQ6UW15 175 aa10.76□□□□□ -0.69
SMARCD3-206ENST00000470588 C1orf134Q5TEV5 83 aa10.75□□□□□ -0.69
SMARCD3-206ENST00000470588 TGP01266 2768 aa10.75□□□□□ -0.69
SMARCD3-206ENST00000470588 TRBV7-4A0A0J9YYF1 115 aa10.75□□□□□ -0.69
SMARCD3-206ENST00000470588 Q9BRP9 147 aa10.74□□□□□ -0.69
SMARCD3-206ENST00000470588 Q8N377 158 aa10.72□□□□□ -0.69
SMARCD3-206ENST00000470588 ANAPC13Q9BS18 74 aa10.72□□□□□ -0.69
SMARCD3-206ENST00000470588 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
SMARCD3-206ENST00000470588 LINC00474Q9P2X8 69 aa10.72□□□□□ -0.69
SMARCD3-206ENST00000470588 LINC01547P58512 204 aaPredicted RBP10.71□□□□□ -0.69
SMARCD3-206ENST00000470588 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
SMARCD3-206ENST00000470588 A0A087WTM6 91 aa10.7□□□□□ -0.7
SMARCD3-206ENST00000470588 IGKV3D-7A0A0C4DH55 119 aa10.69□□□□□ -0.7
SMARCD3-206ENST00000470588 UBE2BP63146 152 aa10.69□□□□□ -0.7
SMARCD3-206ENST00000470588 ATP5EP2Q5VTU8 51 aa10.69□□□□□ -0.7
SMARCD3-206ENST00000470588 IGLV5-48A0A075B6I7 105 aa10.68□□□□□ -0.7
SMARCD3-206ENST00000470588 ALMS1Q8TCU4 4167 aa10.68□□□□□ -0.7
SMARCD3-206ENST00000470588 DNAH10Q8IVF4 4471 aa10.68□□□□□ -0.7
SMARCD3-206ENST00000470588 CHTF8P0CG12 524 aa10.67□□□□□ -0.7
SMARCD3-206ENST00000470588 ERC2-IT1O76042 136 aa10.65□□□□□ -0.7
SMARCD3-206ENST00000470588 ST20-AS1Q8NBB2 130 aa10.65□□□□□ -0.71
SMARCD3-206ENST00000470588 DNAH6Q9C0G6 4158 aa10.64□□□□□ -0.71
SMARCD3-206ENST00000470588 FAM236AA0A1B0GUQ0 79 aa10.64□□□□□ -0.71
SMARCD3-206ENST00000470588 FAM236BA0A1B0GV22 79 aa10.64□□□□□ -0.71
SMARCD3-206ENST00000470588 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
SMARCD3-206ENST00000470588 FAM19A1Q7Z5A9 133 aa10.64□□□□□ -0.71
SMARCD3-206ENST00000470588 Q6ZVQ6 151 aa10.62□□□□□ -0.71
SMARCD3-206ENST00000470588 H0Y9J4 135 aa10.6□□□□□ -0.71
SMARCD3-206ENST00000470588 DPH3Q96FX2 82 aa10.6□□□□□ -0.71
SMARCD3-206ENST00000470588 EPM2AB3EWF7 344 aa10.6□□□□□ -0.71
SMARCD3-206ENST00000470588 RTL8CO15255 209 aa10.6□□□□□ -0.71
SMARCD3-206ENST00000470588 TNP2Q05952 138 aa10.6□□□□□ -0.71
SMARCD3-206ENST00000470588 HIST1H4AP62805 103 aaKnown RBP10.59□□□□□ -0.71
SMARCD3-206ENST00000470588 A0A1B0GW54 56 aa10.58□□□□□ -0.72
SMARCD3-206ENST00000470588 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
SMARCD3-206ENST00000470588 PRLHP81277 87 aa10.57□□□□□ -0.72
SMARCD3-206ENST00000470588 KRTAP11-1Q8IUC1 163 aa10.57□□□□□ -0.72
SMARCD3-206ENST00000470588 SPACA4Q8TDM5 124 aa10.57□□□□□ -0.72
SMARCD3-206ENST00000470588 PANO1I0J062 215 aa10.57□□□□□ -0.72
SMARCD3-206ENST00000470588 C3orf22Q8N5N4 141 aa10.57□□□□□ -0.72
SMARCD3-206ENST00000470588 CXCL6P80162 114 aa10.56□□□□□ -0.72
SMARCD3-206ENST00000470588 HAMPP81172 84 aa10.56□□□□□ -0.72
SMARCD3-206ENST00000470588 SMIM29Q86T20 159 aa10.56□□□□□ -0.72
SMARCD3-206ENST00000470588 C1orf137Q5JT78 98 aa10.54□□□□□ -0.72
SMARCD3-206ENST00000470588 HIGD2AQ9BW72 106 aa10.54□□□□□ -0.72
SMARCD3-206ENST00000470588 KMT2AQ03164 3969 aa10.54□□□□□ -0.72
SMARCD3-206ENST00000470588 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
SMARCD3-206ENST00000470588 ATOX1O00244 68 aa10.53□□□□□ -0.72
SMARCD3-206ENST00000470588 A0A087WVE0 104 aa10.52□□□□□ -0.72
SMARCD3-206ENST00000470588 BCE1O60756 84 aa10.52□□□□□ -0.72
SMARCD3-206ENST00000470588 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.72
SMARCD3-206ENST00000470588 F8WEM9 126 aa10.52□□□□□ -0.73
SMARCD3-206ENST00000470588 UBE2AP49459 152 aa10.52□□□□□ -0.73
SMARCD3-206ENST00000470588 LCE6AA0A183 80 aa10.51□□□□□ -0.73
SMARCD3-206ENST00000470588 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
SMARCD3-206ENST00000470588 NREPQ16612 68 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms