RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 A0A1W2PNN7 141 aa11.54□□□□□ -0.56
SMC4-211ENST00000469858 IGLV1-50A0A075B6I6 118 aa11.54□□□□□ -0.56
SMC4-211ENST00000469858 SNCGO76070 127 aa11.54□□□□□ -0.56
SMC4-211ENST00000469858 ELOF1P60002 83 aaKnown RBP11.54□□□□□ -0.56
SMC4-211ENST00000469858 PPDPFLQ8WWR9 84 aa11.54□□□□□ -0.56
SMC4-211ENST00000469858 TRBV7-6A0A0J9YX20 115 aa11.52□□□□□ -0.56
SMC4-211ENST00000469858 TEX49A0A1B0GTD5 131 aa11.52□□□□□ -0.56
SMC4-211ENST00000469858 hADV29S1A0JD25 119 aa11.52□□□□□ -0.56
SMC4-211ENST00000469858 RTL8CO15255 209 aa11.52□□□□□ -0.57
SMC4-211ENST00000469858 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.57
SMC4-211ENST00000469858 PRYO14603 147 aa11.5□□□□□ -0.57
SMC4-211ENST00000469858 TNP2Q05952 138 aa11.5□□□□□ -0.57
SMC4-211ENST00000469858 J3QR89 54 aa11.49□□□□□ -0.57
SMC4-211ENST00000469858 LINC00474Q9P2X8 69 aa11.49□□□□□ -0.57
SMC4-211ENST00000469858 PANO1I0J062 215 aa11.48□□□□□ -0.57
SMC4-211ENST00000469858 LINC00528Q8N1L1 170 aa11.48□□□□□ -0.57
SMC4-211ENST00000469858 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
SMC4-211ENST00000469858 IGLV5-52A0A0A0MRZ9 124 aa11.46□□□□□ -0.58
SMC4-211ENST00000469858 Q6ZQY7 126 aa11.46□□□□□ -0.58
SMC4-211ENST00000469858 DPH3Q96FX2 82 aa11.46□□□□□ -0.58
SMC4-211ENST00000469858 SPRR1AP35321 89 aa11.45□□□□□ -0.58
SMC4-211ENST00000469858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.45□□□□□ -0.58
SMC4-211ENST00000469858 DNAH17Q9UFH2 4485 aa11.45□□□□□ -0.58
SMC4-211ENST00000469858 ETDCA0A1B0GVM5 59 aa11.45□□□□□ -0.58
SMC4-211ENST00000469858 PHF5AQ7RTV0 110 aaKnown RBP11.45□□□□□ -0.58
SMC4-211ENST00000469858 HECTD4Q9Y4D8 3996 aa11.44□□□□□ -0.58
SMC4-211ENST00000469858 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
SMC4-211ENST00000469858 SPACA4Q8TDM5 124 aa11.44□□□□□ -0.58
SMC4-211ENST00000469858 REG3GQ6UW15 175 aa11.43□□□□□ -0.58
SMC4-211ENST00000469858 FRAS1Q86XX4 4008 aa11.43□□□□□ -0.58
SMC4-211ENST00000469858 TMEM256-PLSCR3K7ERE1 68 aa11.43□□□□□ -0.58
SMC4-211ENST00000469858 B5MCH6 92 aa11.42□□□□□ -0.58
SMC4-211ENST00000469858 Q6ZRX8 168 aa11.42□□□□□ -0.58
SMC4-211ENST00000469858 UBE2BP63146 152 aa11.41□□□□□ -0.58
SMC4-211ENST00000469858 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.41□□□□□ -0.58
SMC4-211ENST00000469858 A0A1B0GV72 72 aa11.4□□□□□ -0.58
SMC4-211ENST00000469858 VPS25Q9BRG1 176 aa11.39□□□□□ -0.59
SMC4-211ENST00000469858 KRTAP11-1Q8IUC1 163 aa11.38□□□□□ -0.59
SMC4-211ENST00000469858 Q9BRP9 147 aa11.38□□□□□ -0.59
SMC4-211ENST00000469858 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
SMC4-211ENST00000469858 DHRS4-AS1Q9P1J3 65 aa11.37□□□□□ -0.59
SMC4-211ENST00000469858 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
SMC4-211ENST00000469858 FAM19A1Q7Z5A9 133 aa11.35□□□□□ -0.59
SMC4-211ENST00000469858 OBSCN-AS1Q96MR7 158 aa11.35□□□□□ -0.59
SMC4-211ENST00000469858 C14orf132Q9NPU4 83 aa11.35□□□□□ -0.59
SMC4-211ENST00000469858 LCE6AA0A183 80 aa11.34□□□□□ -0.59
SMC4-211ENST00000469858 H3BQ85 93 aa11.34□□□□□ -0.59
SMC4-211ENST00000469858 LAMTOR3Q9UHA4 124 aa11.34□□□□□ -0.59
SMC4-211ENST00000469858 EPM2AB3EWF7 344 aa11.33□□□□□ -0.6
SMC4-211ENST00000469858 GHRHP01286 108 aa11.33□□□□□ -0.6
SMC4-211ENST00000469858 PRLHP81277 87 aa11.33□□□□□ -0.6
SMC4-211ENST00000469858 JMJD7-PLA2G4BH0Y9G9 81 aa11.32□□□□□ -0.6
SMC4-211ENST00000469858 SACSQ9NZJ4 4579 aa11.32□□□□□ -0.6
SMC4-211ENST00000469858 ERC2-IT1O76042 136 aa11.3□□□□□ -0.6
SMC4-211ENST00000469858 DEFB105AQ8NG35 78 aa11.3□□□□□ -0.6
SMC4-211ENST00000469858 PLAC8Q9NZF1 115 aa11.3□□□□□ -0.6
SMC4-211ENST00000469858 SMCR5Q8TEV8 140 aa11.29□□□□□ -0.6
SMC4-211ENST00000469858 DNAH11Q96DT5 4516 aa11.29□□□□□ -0.6
SMC4-211ENST00000469858 ST20-AS1Q8NBB2 130 aa11.28□□□□□ -0.6
SMC4-211ENST00000469858 FAT2Q9NYQ8 4349 aa11.28□□□□□ -0.6
SMC4-211ENST00000469858 GAGE2AQ6NT46 116 aa11.27□□□□□ -0.61
SMC4-211ENST00000469858 HIGD2AQ9BW72 106 aa11.27□□□□□ -0.61
SMC4-211ENST00000469858 CDIP1Q9H305 208 aa11.27□□□□□ -0.61
SMC4-211ENST00000469858 NDUFV3P56181 108 aaKnown RBP11.26□□□□□ -0.61
SMC4-211ENST00000469858 LINC01547P58512 204 aaPredicted RBP11.26□□□□□ -0.61
SMC4-211ENST00000469858 RBM3P98179 157 aaKnown RBP11.26□□□□□ -0.61
SMC4-211ENST00000469858 Q8N377 158 aa11.26□□□□□ -0.61
SMC4-211ENST00000469858 DNAH5Q8TE73 4624 aa11.25□□□□□ -0.61
SMC4-211ENST00000469858 FAM240AA0A1B0GVK7 77 aa11.25□□□□□ -0.61
SMC4-211ENST00000469858 UBE2AP49459 152 aa11.25□□□□□ -0.61
SMC4-211ENST00000469858 BCE1O60756 84 aa11.24□□□□□ -0.61
SMC4-211ENST00000469858 FAM30AQ9NZY2 134 aa11.23□□□□□ -0.61
SMC4-211ENST00000469858 PKD1P98161 4303 aa11.22□□□□□ -0.61
SMC4-211ENST00000469858 IGLV5-48A0A075B6I7 105 aa11.22□□□□□ -0.61
SMC4-211ENST00000469858 H0Y9J4 135 aa11.22□□□□□ -0.61
SMC4-211ENST00000469858 KRTAP10-1P60331 282 aa11.21□□□□□ -0.61
SMC4-211ENST00000469858 ACYP1P07311 99 aa11.21□□□□□ -0.62
SMC4-211ENST00000469858 C3orf22Q8N5N4 141 aa11.21□□□□□ -0.62
SMC4-211ENST00000469858 DSCR8Q96T75 97 aa11.21□□□□□ -0.62
SMC4-211ENST00000469858 CCKP06307 115 aa11.2□□□□□ -0.62
SMC4-211ENST00000469858 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
SMC4-211ENST00000469858 PSORS1C2Q9UIG4 136 aa11.19□□□□□ -0.62
SMC4-211ENST00000469858 LOC110117498A0A087WWA1 95 aa11.18□□□□□ -0.62
SMC4-211ENST00000469858 Q6ZQT0 140 aa11.18□□□□□ -0.62
SMC4-211ENST00000469858 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
SMC4-211ENST00000469858 LINC00336Q6ZUF6 198 aa11.17□□□□□ -0.62
SMC4-211ENST00000469858 KRTAP13-1Q8IUC0 172 aa11.17□□□□□ -0.62
SMC4-211ENST00000469858 XGP55808 180 aa11.17□□□□□ -0.62
SMC4-211ENST00000469858 Q6ZSA8 131 aa11.17□□□□□ -0.62
SMC4-211ENST00000469858 TRBV7-4A0A0J9YYF1 115 aa11.16□□□□□ -0.62
SMC4-211ENST00000469858 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
SMC4-211ENST00000469858 HAMPP81172 84 aa11.15□□□□□ -0.62
SMC4-211ENST00000469858 C1orf137Q5JT78 98 aa11.15□□□□□ -0.62
SMC4-211ENST00000469858 SIGMAR1Q99720 223 aa11.14□□□□□ -0.63
SMC4-211ENST00000469858 PDE6GP18545 87 aa11.13□□□□□ -0.63
SMC4-211ENST00000469858 MT-ATP8P03928 68 aa11.12□□□□□ -0.63
SMC4-211ENST00000469858 SMIM29Q86T20 159 aa11.12□□□□□ -0.63
SMC4-211ENST00000469858 LINC00846Q9NV44 126 aa11.12□□□□□ -0.63
SMC4-211ENST00000469858 RYR2Q92736 4967 aa11.11□□□□□ -0.63
SMC4-211ENST00000469858 KMT2CQ8NEZ4 4911 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms