RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ATMQ13315 3056 aa5.9□□□□□ -1.46
SMARCE1-207ENST00000469334 SPTA1P02549 2419 aa5.9□□□□□ -1.46
SMARCE1-207ENST00000469334 C19orf73Q9NVV2 129 aa5.89□□□□□ -1.47
SMARCE1-207ENST00000469334 GCN1Q92616 2671 aaKnown RBP5.89□□□□□ -1.47
SMARCE1-207ENST00000469334 TLN1Q9Y490 2541 aaKnown RBP5.88□□□□□ -1.47
SMARCE1-207ENST00000469334 NOTCH3Q9UM47 2321 aa5.88□□□□□ -1.47
SMARCE1-207ENST00000469334 A0A096LPF7 62 aa5.88□□□□□ -1.47
SMARCE1-207ENST00000469334 WFDC10AQ9H1F0 79 aa5.88□□□□□ -1.47
SMARCE1-207ENST00000469334 CFAP46Q8IYW2 2715 aa5.87□□□□□ -1.47
SMARCE1-207ENST00000469334 C8orf87E5RJ46 101 aa5.87□□□□□ -1.47
SMARCE1-207ENST00000469334 LELP1Q5T871 98 aa5.87□□□□□ -1.47
SMARCE1-207ENST00000469334 DEFB105AQ8NG35 78 aa5.87□□□□□ -1.47
SMARCE1-207ENST00000469334 CAMK2N2Q96S95 79 aa5.87□□□□□ -1.47
SMARCE1-207ENST00000469334 C11orf45Q8TAV5 145 aa5.86□□□□□ -1.47
SMARCE1-207ENST00000469334 HELZ2Q9BYK8 2649 aaKnown RBP5.86□□□□□ -1.47
SMARCE1-207ENST00000469334 IGKV2D-24A0A075B6R9 120 aa5.86□□□□□ -1.47
SMARCE1-207ENST00000469334 H0Y9P7 68 aa5.86□□□□□ -1.47
SMARCE1-207ENST00000469334 PRB2P02812 416 aaPredicted RBP5.86□□□□□ -1.47
SMARCE1-207ENST00000469334 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
SMARCE1-207ENST00000469334 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
SMARCE1-207ENST00000469334 IGLV1-51P01701 117 aa5.85□□□□□ -1.47
SMARCE1-207ENST00000469334 FLNBO75369 2602 aaKnown RBP5.85□□□□□ -1.47
SMARCE1-207ENST00000469334 MOBPQ13875 183 aa5.84□□□□□ -1.47
SMARCE1-207ENST00000469334 COA5Q86WW8 74 aa5.84□□□□□ -1.47
SMARCE1-207ENST00000469334 PLAC8Q9NZF1 115 aa5.84□□□□□ -1.47
SMARCE1-207ENST00000469334 COL12A1Q99715 3063 aa5.84□□□□□ -1.47
SMARCE1-207ENST00000469334 CSPG4Q6UVK1 2322 aa5.84□□□□□ -1.47
SMARCE1-207ENST00000469334 Q6ZRX8 168 aa5.84□□□□□ -1.47
SMARCE1-207ENST00000469334 KRTAP29-1A8MX34 341 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-207ENST00000469334 NKAPP1Q8N9T2 125 aa5.83□□□□□ -1.48
SMARCE1-207ENST00000469334 ASH1LQ9NR48 2969 aaKnown RBP5.82□□□□□ -1.48
SMARCE1-207ENST00000469334 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
SMARCE1-207ENST00000469334 WFDC13Q8IUB5 93 aa5.82□□□□□ -1.48
SMARCE1-207ENST00000469334 X6R8D5 127 aa5.82□□□□□ -1.48
SMARCE1-207ENST00000469334 RELNP78509 3460 aa5.81□□□□□ -1.48
SMARCE1-207ENST00000469334 HIVEP3Q5T1R4 2406 aa5.81□□□□□ -1.48
SMARCE1-207ENST00000469334 CELSR1Q9NYQ6 3014 aa5.81□□□□□ -1.48
SMARCE1-207ENST00000469334 SVEP1Q4LDE5 3571 aa5.8□□□□□ -1.48
SMARCE1-207ENST00000469334 MAP1AP78559 2803 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-207ENST00000469334 PLA2G2DQ9UNK4 145 aa5.8□□□□□ -1.48
SMARCE1-207ENST00000469334 TENM4Q6N022 2769 aa5.8□□□□□ -1.48
SMARCE1-207ENST00000469334 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-207ENST00000469334 C7orf33Q8WU49 177 aa5.8□□□□□ -1.48
SMARCE1-207ENST00000469334 SPRR1AP35321 89 aa5.79□□□□□ -1.48
SMARCE1-207ENST00000469334 CASC2Q6XLA1 102 aa5.79□□□□□ -1.48
SMARCE1-207ENST00000469334 CNBPP62633 177 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-207ENST00000469334 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
SMARCE1-207ENST00000469334 WFDC10BQ8IUB3 73 aa5.78□□□□□ -1.48
SMARCE1-207ENST00000469334 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
SMARCE1-207ENST00000469334 LINC00476Q8WZB0 136 aa5.77□□□□□ -1.49
SMARCE1-207ENST00000469334 A0A087X002 238 aa5.77□□□□□ -1.49
SMARCE1-207ENST00000469334 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
SMARCE1-207ENST00000469334 KRTAP26-1Q6PEX3 210 aa5.76□□□□□ -1.49
SMARCE1-207ENST00000469334 IGLV8-61A0A075B6I0 122 aa5.75□□□□□ -1.49
SMARCE1-207ENST00000469334 NAV2Q8IVL1 2488 aa5.75□□□□□ -1.49
SMARCE1-207ENST00000469334 DEFB116Q30KQ4 102 aa5.75□□□□□ -1.49
SMARCE1-207ENST00000469334 NBASA2RRP1 2371 aa5.74□□□□□ -1.49
SMARCE1-207ENST00000469334 IGLV1-50A0A075B6I6 118 aa5.74□□□□□ -1.49
SMARCE1-207ENST00000469334 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
SMARCE1-207ENST00000469334 SERTAD4-AS1Q5TG53 156 aa5.74□□□□□ -1.49
SMARCE1-207ENST00000469334 SPG11Q96JI7 2443 aa5.74□□□□□ -1.49
SMARCE1-207ENST00000469334 IGFL1Q6UW32 110 aa5.74□□□□□ -1.49
SMARCE1-207ENST00000469334 MYO18BQ8IUG5 2567 aa5.73□□□□□ -1.49
SMARCE1-207ENST00000469334 LINC00313P59037 77 aa5.73□□□□□ -1.49
SMARCE1-207ENST00000469334 USP9XQ93008 2570 aaPredicted RBP5.73□□□□□ -1.49
SMARCE1-207ENST00000469334 DNAJC9-AS1A6NH13 148 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 A8MWP4 228 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 H3BS24 57 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 PLA2G1BP04054 148 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 SPINK7P58062 85 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 LINC01554Q52M75 96 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 FLNCQ14315 2725 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 HECTD1Q9ULT8 2610 aa5.72□□□□□ -1.49
SMARCE1-207ENST00000469334 A0A087WSZ3 146 aa5.71□□□□□ -1.5
SMARCE1-207ENST00000469334 RPL37AP8A6NKH3 93 aa5.71□□□□□ -1.5
SMARCE1-207ENST00000469334 MAPK1IP1LQ8NDC0 245 aa5.71□□□□□ -1.5
SMARCE1-207ENST00000469334 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
SMARCE1-207ENST00000469334 TLN2Q9Y4G6 2542 aa5.7□□□□□ -1.5
SMARCE1-207ENST00000469334 SPART-AS1P0CW21 52 aa5.69□□□□□ -1.5
SMARCE1-207ENST00000469334 RPL37AP61513 92 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-207ENST00000469334 Q8NAQ8 132 aa5.68□□□□□ -1.5
SMARCE1-207ENST00000469334 UBR5O95071 2799 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-207ENST00000469334 CRYBG3Q68DQ2 2970 aa5.68□□□□□ -1.5
SMARCE1-207ENST00000469334 LRRK2Q5S007 2527 aa5.67□□□□□ -1.5
SMARCE1-207ENST00000469334 DEFB131BA0A096LNP1 70 aa5.67□□□□□ -1.5
SMARCE1-207ENST00000469334 PTPN13Q12923 2485 aa5.67□□□□□ -1.5
SMARCE1-207ENST00000469334 MMP24-AS1A0A0U1RRL7 71 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 H3BNG1 76 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 NBPF19A0A087WUL8 3843 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 DEFB4AO15263 64 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 HTN3P15516 51 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 DEFB135Q30KP9 77 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 REG3GQ6UW15 175 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 Q6ZR54 194 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 LINC00472Q9H8W2 130 aa5.66□□□□□ -1.5
SMARCE1-207ENST00000469334 HRES1P13985 223 aa5.65□□□□□ -1.5
SMARCE1-207ENST00000469334 JMJD1CQ15652 2540 aa5.65□□□□□ -1.5
SMARCE1-207ENST00000469334 PCOTHQ58A44 107 aa5.65□□□□□ -1.51
SMARCE1-207ENST00000469334 PRAC1Q96KF2 57 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 246.3 ms