RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ETDBQ3ZM63 59 aa13.04□□□□□ -0.32
TMEM53-207ENST00000468117 LCE6AA0A183 80 aa13.03□□□□□ -0.32
TMEM53-207ENST00000468117 LINC00474Q9P2X8 69 aa13.03□□□□□ -0.32
TMEM53-207ENST00000468117 CBY1Q9Y3M2 126 aa13.03□□□□□ -0.32
TMEM53-207ENST00000468117 DNAL4O96015 105 aa13.02□□□□□ -0.33
TMEM53-207ENST00000468117 ANKRD29Q8N6D5 301 aa13.02□□□□□ -0.33
TMEM53-207ENST00000468117 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.02□□□□□ -0.33
TMEM53-207ENST00000468117 LINC00575Q6W349 94 aa13.01□□□□□ -0.33
TMEM53-207ENST00000468117 COX7BP24311 80 aa13□□□□□ -0.33
TMEM53-207ENST00000468117 DPH3Q96FX2 82 aa13□□□□□ -0.33
TMEM53-207ENST00000468117 ELOF1P60002 83 aaKnown RBP13□□□□□ -0.33
TMEM53-207ENST00000468117 SPACA4Q8TDM5 124 aa13□□□□□ -0.33
TMEM53-207ENST00000468117 PKD1P98161 4303 aa12.99□□□□□ -0.33
TMEM53-207ENST00000468117 KRTAP10-2P60368 255 aa12.99□□□□□ -0.33
TMEM53-207ENST00000468117 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
TMEM53-207ENST00000468117 TRBV7-6A0A0J9YX20 115 aa12.98□□□□□ -0.33
TMEM53-207ENST00000468117 H3BT86 120 aa12.98□□□□□ -0.33
TMEM53-207ENST00000468117 PRYO14603 147 aa12.98□□□□□ -0.33
TMEM53-207ENST00000468117 PHF5AQ7RTV0 110 aaKnown RBP12.98□□□□□ -0.33
TMEM53-207ENST00000468117 A0A1B0GX51 115 aa12.97□□□□□ -0.33
TMEM53-207ENST00000468117 BAALC-AS2P0C853 105 aa12.96□□□□□ -0.33
TMEM53-207ENST00000468117 hADV29S1A0JD25 119 aa12.96□□□□□ -0.34
TMEM53-207ENST00000468117 LINC01600Q96MT4 127 aa12.96□□□□□ -0.34
TMEM53-207ENST00000468117 LINC00528Q8N1L1 170 aa12.95□□□□□ -0.34
TMEM53-207ENST00000468117 SPRR1AP35321 89 aa12.95□□□□□ -0.34
TMEM53-207ENST00000468117 TEN1Q86WV5 123 aa12.95□□□□□ -0.34
TMEM53-207ENST00000468117 KMT2CQ8NEZ4 4911 aaKnown RBP12.94□□□□□ -0.34
TMEM53-207ENST00000468117 KRTAP4-16G5E9R7 235 aaPredicted RBP12.94□□□□□ -0.34
TMEM53-207ENST00000468117 SNCGO76070 127 aa12.94□□□□□ -0.34
TMEM53-207ENST00000468117 REG3GQ6UW15 175 aa12.92□□□□□ -0.34
TMEM53-207ENST00000468117 UBE2BP63146 152 aa12.91□□□□□ -0.34
TMEM53-207ENST00000468117 KRTAP11-1Q8IUC1 163 aa12.91□□□□□ -0.34
TMEM53-207ENST00000468117 ORMDL1Q9P0S3 153 aa12.91□□□□□ -0.34
TMEM53-207ENST00000468117 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
TMEM53-207ENST00000468117 OCIAD2Q56VL3 154 aa12.91□□□□□ -0.34
TMEM53-207ENST00000468117 B5MCH6 92 aa12.89□□□□□ -0.35
TMEM53-207ENST00000468117 Q6ZRX8 168 aa12.89□□□□□ -0.35
TMEM53-207ENST00000468117 DNAH8Q96JB1 4490 aa12.89□□□□□ -0.35
TMEM53-207ENST00000468117 Q6ZQY7 126 aa12.89□□□□□ -0.35
TMEM53-207ENST00000468117 RYR2Q92736 4967 aa12.89□□□□□ -0.35
TMEM53-207ENST00000468117 TEX49A0A1B0GTD5 131 aa12.88□□□□□ -0.35
TMEM53-207ENST00000468117 EPM2AB3EWF7 344 aa12.88□□□□□ -0.35
TMEM53-207ENST00000468117 Q9BRP9 147 aa12.86□□□□□ -0.35
TMEM53-207ENST00000468117 PPDPFLQ8WWR9 84 aa12.85□□□□□ -0.35
TMEM53-207ENST00000468117 PLAC8Q9NZF1 115 aa12.84□□□□□ -0.35
TMEM53-207ENST00000468117 TMEM256-PLSCR3K7ERE1 68 aa12.83□□□□□ -0.36
TMEM53-207ENST00000468117 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.36
TMEM53-207ENST00000468117 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.83□□□□□ -0.36
TMEM53-207ENST00000468117 FAM19A1Q7Z5A9 133 aa12.83□□□□□ -0.36
TMEM53-207ENST00000468117 K7ERU9 68 aa12.82□□□□□ -0.36
TMEM53-207ENST00000468117 FAM30AQ9NZY2 134 aa12.82□□□□□ -0.36
TMEM53-207ENST00000468117 PKHD1P08F94 4074 aa12.81□□□□□ -0.36
TMEM53-207ENST00000468117 DHRS4-AS1Q9P1J3 65 aa12.81□□□□□ -0.36
TMEM53-207ENST00000468117 KRTAP10-1P60331 282 aa12.81□□□□□ -0.36
TMEM53-207ENST00000468117 PRLHP81277 87 aa12.81□□□□□ -0.36
TMEM53-207ENST00000468117 LINC00336Q6ZUF6 198 aa12.8□□□□□ -0.36
TMEM53-207ENST00000468117 SRRM2Q9UQ35 2752 aaKnown RBP12.79□□□□□ -0.36
TMEM53-207ENST00000468117 A0A1B0GV72 72 aa12.78□□□□□ -0.36
TMEM53-207ENST00000468117 ERC2-IT1O76042 136 aa12.78□□□□□ -0.36
TMEM53-207ENST00000468117 SMCR5Q8TEV8 140 aa12.77□□□□□ -0.37
TMEM53-207ENST00000468117 J3QR89 54 aa12.75□□□□□ -0.37
TMEM53-207ENST00000468117 Q6ZSA8 131 aa12.74□□□□□ -0.37
TMEM53-207ENST00000468117 CIRBP-AS1Q8TBR5 109 aa12.74□□□□□ -0.37
TMEM53-207ENST00000468117 ST20-AS1Q8NBB2 130 aa12.74□□□□□ -0.37
TMEM53-207ENST00000468117 DEFB105AQ8NG35 78 aa12.74□□□□□ -0.37
TMEM53-207ENST00000468117 HIGD2AQ9BW72 106 aa12.74□□□□□ -0.37
TMEM53-207ENST00000468117 BCE1O60756 84 aa12.73□□□□□ -0.37
TMEM53-207ENST00000468117 OBSCN-AS1Q96MR7 158 aa12.72□□□□□ -0.37
TMEM53-207ENST00000468117 H3BQ85 93 aa12.72□□□□□ -0.37
TMEM53-207ENST00000468117 GHRHP01286 108 aa12.72□□□□□ -0.37
TMEM53-207ENST00000468117 HAMPP81172 84 aa12.72□□□□□ -0.37
TMEM53-207ENST00000468117 LAMTOR3Q9UHA4 124 aa12.72□□□□□ -0.37
TMEM53-207ENST00000468117 UBE2AP49459 152 aa12.71□□□□□ -0.37
TMEM53-207ENST00000468117 SCXQ7RTU7 201 aa12.71□□□□□ -0.37
TMEM53-207ENST00000468117 PSORS1C2Q9UIG4 136 aa12.71□□□□□ -0.37
TMEM53-207ENST00000468117 C14orf132Q9NPU4 83 aa12.71□□□□□ -0.38
TMEM53-207ENST00000468117 H0Y9J4 135 aa12.7□□□□□ -0.38
TMEM53-207ENST00000468117 LINC01547P58512 204 aaPredicted RBP12.7□□□□□ -0.38
TMEM53-207ENST00000468117 Q8N377 158 aa12.69□□□□□ -0.38
TMEM53-207ENST00000468117 A0A1B0GVY2 172 aa12.69□□□□□ -0.38
TMEM53-207ENST00000468117 JMJD7-PLA2G4BH0Y9G9 81 aa12.68□□□□□ -0.38
TMEM53-207ENST00000468117 KRTAP13-1Q8IUC0 172 aa12.67□□□□□ -0.38
TMEM53-207ENST00000468117 LRP1BQ9NZR2 4599 aa12.66□□□□□ -0.38
TMEM53-207ENST00000468117 IGLV5-48A0A075B6I7 105 aa12.66□□□□□ -0.38
TMEM53-207ENST00000468117 NDUFV3P56181 108 aaKnown RBP12.66□□□□□ -0.38
TMEM53-207ENST00000468117 C1orf137Q5JT78 98 aa12.66□□□□□ -0.38
TMEM53-207ENST00000468117 RYR3Q15413 4870 aa12.65□□□□□ -0.38
TMEM53-207ENST00000468117 RBM3P98179 157 aaKnown RBP12.64□□□□□ -0.39
TMEM53-207ENST00000468117 C3orf22Q8N5N4 141 aa12.64□□□□□ -0.39
TMEM53-207ENST00000468117 DYNC1H1Q14204 4646 aaKnown RBP12.61□□□□□ -0.39
TMEM53-207ENST00000468117 GAGE2AQ6NT46 116 aa12.6□□□□□ -0.39
TMEM53-207ENST00000468117 VPS25Q9BRG1 176 aa12.59□□□□□ -0.39
TMEM53-207ENST00000468117 DSCR8Q96T75 97 aa12.57□□□□□ -0.4
TMEM53-207ENST00000468117 SMIM29Q86T20 159 aa12.55□□□□□ -0.4
TMEM53-207ENST00000468117 FAM240AA0A1B0GVK7 77 aa12.55□□□□□ -0.4
TMEM53-207ENST00000468117 ZNF861PO60384 105 aa12.55□□□□□ -0.4
TMEM53-207ENST00000468117 CCKP06307 115 aa12.54□□□□□ -0.4
TMEM53-207ENST00000468117 Q6ZQT0 140 aa12.54□□□□□ -0.4
TMEM53-207ENST00000468117 CDIP1Q9H305 208 aa12.54□□□□□ -0.4
TMEM53-207ENST00000468117 LOC110117498A0A087WWA1 95 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms