RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 DNAH5Q8TE73 4624 aa9.47□□□□□ -0.89
DDX56-208ENST00000467318 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
DDX56-208ENST00000467318 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
DDX56-208ENST00000467318 ANAPC13Q9BS18 74 aa9.47□□□□□ -0.89
DDX56-208ENST00000467318 IMUPQ9GZP8 106 aa9.47□□□□□ -0.89
DDX56-208ENST00000467318 TMEM126AQ9H061 195 aa9.46□□□□□ -0.89
DDX56-208ENST00000467318 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
DDX56-208ENST00000467318 KRTAP10-1P60331 282 aa9.45□□□□□ -0.9
DDX56-208ENST00000467318 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
DDX56-208ENST00000467318 LINC00643Q86TS7 51 aa9.45□□□□□ -0.9
DDX56-208ENST00000467318 TRBV7-7A0A0K0K1E9 115 aa9.44□□□□□ -0.9
DDX56-208ENST00000467318 Q6ZRP5 223 aa9.44□□□□□ -0.9
DDX56-208ENST00000467318 A0A087WYN8 130 aa9.43□□□□□ -0.9
DDX56-208ENST00000467318 ORMDL1Q9P0S3 153 aa9.43□□□□□ -0.9
DDX56-208ENST00000467318 C22orf24Q9Y442 160 aa9.43□□□□□ -0.9
DDX56-208ENST00000467318 NDUFV3P56181 108 aaKnown RBP9.42□□□□□ -0.9
DDX56-208ENST00000467318 A0A096LNI7 61 aa9.42□□□□□ -0.9
DDX56-208ENST00000467318 Q6ZSA8 131 aa9.42□□□□□ -0.9
DDX56-208ENST00000467318 OBSCN-AS1Q96MR7 158 aa9.42□□□□□ -0.9
DDX56-208ENST00000467318 LINC00167Q96N53 147 aa9.42□□□□□ -0.9
DDX56-208ENST00000467318 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
DDX56-208ENST00000467318 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
DDX56-208ENST00000467318 SPACA4Q8TDM5 124 aa9.39□□□□□ -0.91
DDX56-208ENST00000467318 DPH3Q96FX2 82 aa9.39□□□□□ -0.91
DDX56-208ENST00000467318 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.39□□□□□ -0.91
DDX56-208ENST00000467318 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
DDX56-208ENST00000467318 H3BQ85 93 aa9.39□□□□□ -0.91
DDX56-208ENST00000467318 CHTF8P0CG12 524 aa9.39□□□□□ -0.91
DDX56-208ENST00000467318 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
DDX56-208ENST00000467318 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
DDX56-208ENST00000467318 TMEM256-PLSCR3K7ERE1 68 aa9.38□□□□□ -0.91
DDX56-208ENST00000467318 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
DDX56-208ENST00000467318 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
DDX56-208ENST00000467318 PANO1I0J062 215 aa9.37□□□□□ -0.91
DDX56-208ENST00000467318 XAGE1AQ9HD64 81 aa9.37□□□□□ -0.91
DDX56-208ENST00000467318 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
DDX56-208ENST00000467318 HAMPP81172 84 aa9.35□□□□□ -0.91
DDX56-208ENST00000467318 PRR3P79522 188 aaKnown RBP9.33□□□□□ -0.92
DDX56-208ENST00000467318 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
DDX56-208ENST00000467318 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
DDX56-208ENST00000467318 PLAC8Q9NZF1 115 aa9.33□□□□□ -0.92
DDX56-208ENST00000467318 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
DDX56-208ENST00000467318 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 NCR3O14931 201 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 GHRHP01286 108 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 SMCR5Q8TEV8 140 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
DDX56-208ENST00000467318 IGLV6-57P01721 117 aa9.31□□□□□ -0.92
DDX56-208ENST00000467318 CCKP06307 115 aa9.31□□□□□ -0.92
DDX56-208ENST00000467318 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
DDX56-208ENST00000467318 LINC00575Q6W349 94 aa9.31□□□□□ -0.92
DDX56-208ENST00000467318 hADV29S1A0JD25 119 aa9.29□□□□□ -0.92
DDX56-208ENST00000467318 FAM168BA1KXE4 195 aa9.29□□□□□ -0.92
DDX56-208ENST00000467318 Q6JHZ5 121 aa9.29□□□□□ -0.92
DDX56-208ENST00000467318 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
DDX56-208ENST00000467318 APOBP04114 4563 aaKnown RBP9.28□□□□□ -0.92
DDX56-208ENST00000467318 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
DDX56-208ENST00000467318 SERTAD4-AS1Q5TG53 156 aa9.28□□□□□ -0.92
DDX56-208ENST00000467318 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
DDX56-208ENST00000467318 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
DDX56-208ENST00000467318 VPREB1P12018 145 aa9.26□□□□□ -0.93
DDX56-208ENST00000467318 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
DDX56-208ENST00000467318 KIAA1109Q2LD37 5005 aa9.26□□□□□ -0.93
DDX56-208ENST00000467318 FAM236AA0A1B0GUQ0 79 aa9.25□□□□□ -0.93
DDX56-208ENST00000467318 FAM236BA0A1B0GV22 79 aa9.25□□□□□ -0.93
DDX56-208ENST00000467318 Q8NDZ9 215 aa9.25□□□□□ -0.93
DDX56-208ENST00000467318 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
DDX56-208ENST00000467318 BIRC6Q9NR09 4857 aa9.25□□□□□ -0.93
DDX56-208ENST00000467318 TRAV23DV6A0A075B6W5 121 aa9.24□□□□□ -0.93
DDX56-208ENST00000467318 PDE6GP18545 87 aa9.24□□□□□ -0.93
DDX56-208ENST00000467318 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
DDX56-208ENST00000467318 M0R378 163 aa9.23□□□□□ -0.93
DDX56-208ENST00000467318 ATP5EP2Q5VTU8 51 aa9.23□□□□□ -0.93
DDX56-208ENST00000467318 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
DDX56-208ENST00000467318 RBM3P98179 157 aaKnown RBP9.23□□□□□ -0.93
DDX56-208ENST00000467318 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
DDX56-208ENST00000467318 C7orf33Q8WU49 177 aa9.23□□□□□ -0.93
DDX56-208ENST00000467318 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
DDX56-208ENST00000467318 COX7BP24311 80 aa9.22□□□□□ -0.93
DDX56-208ENST00000467318 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.22□□□□□ -0.93
DDX56-208ENST00000467318 LOC110117498A0A087WWA1 95 aa9.21□□□□□ -0.93
DDX56-208ENST00000467318 TRBV10-3A0A0K0K1G6 114 aa9.21□□□□□ -0.93
DDX56-208ENST00000467318 B5MCH6 92 aa9.21□□□□□ -0.93
DDX56-208ENST00000467318 KRTAP17-1Q9BYP8 105 aa9.21□□□□□ -0.93
DDX56-208ENST00000467318 ATOX1O00244 68 aa9.2□□□□□ -0.94
DDX56-208ENST00000467318 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
DDX56-208ENST00000467318 UBE2BP63146 152 aa9.2□□□□□ -0.94
DDX56-208ENST00000467318 LAMTOR3Q9UHA4 124 aa9.2□□□□□ -0.94
DDX56-208ENST00000467318 HSPG2P98160 4391 aa9.2□□□□□ -0.94
DDX56-208ENST00000467318 SMR3BP02814 79 aaPredicted RBP9.19□□□□□ -0.94
DDX56-208ENST00000467318 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
DDX56-208ENST00000467318 UBL5Q9BZL1 73 aa9.18□□□□□ -0.94
DDX56-208ENST00000467318 UQCRQO14949 82 aa9.17□□□□□ -0.94
DDX56-208ENST00000467318 ELOF1P60002 83 aaKnown RBP9.17□□□□□ -0.94
DDX56-208ENST00000467318 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
DDX56-208ENST00000467318 RYR1P21817 5038 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms