RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 TRAV23DV6A0A075B6W5 121 aa6.15□□□□□ -1.42
APOBEC1-202ENST00000467171 A0A087WYN8 130 aa6.15□□□□□ -1.42
APOBEC1-202ENST00000467171 Q6ZR54 194 aa6.15□□□□□ -1.42
APOBEC1-202ENST00000467171 PKIGQ9Y2B9 76 aa6.15□□□□□ -1.42
APOBEC1-202ENST00000467171 SNCGO76070 127 aa6.14□□□□□ -1.43
APOBEC1-202ENST00000467171 DNAL4O96015 105 aa6.14□□□□□ -1.43
APOBEC1-202ENST00000467171 BAALC-AS2P0C853 105 aa6.14□□□□□ -1.43
APOBEC1-202ENST00000467171 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
APOBEC1-202ENST00000467171 C16orf90A8MZG2 172 aa6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 ZNF73O43830 326 aaPredicted RBP6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 GAGE2BQ13066 116 aa6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 SERTAD4-AS1Q5TG53 156 aa6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 LINC00575Q6W349 94 aa6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 Q8N814 137 aa6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
APOBEC1-202ENST00000467171 C7orf33Q8WU49 177 aa6.12□□□□□ -1.43
APOBEC1-202ENST00000467171 C3orf84H3BNL1 204 aa6.11□□□□□ -1.43
APOBEC1-202ENST00000467171 H3BQ85 93 aa6.11□□□□□ -1.43
APOBEC1-202ENST00000467171 COX7BP24311 80 aa6.11□□□□□ -1.43
APOBEC1-202ENST00000467171 ELOF1P60002 83 aaKnown RBP6.11□□□□□ -1.43
APOBEC1-202ENST00000467171 C9orf163Q8N9P6 203 aa6.11□□□□□ -1.43
APOBEC1-202ENST00000467171 C22orf24Q9Y442 160 aa6.11□□□□□ -1.43
APOBEC1-202ENST00000467171 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
APOBEC1-202ENST00000467171 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
APOBEC1-202ENST00000467171 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
APOBEC1-202ENST00000467171 LYSTQ99698 3801 aa6.1□□□□□ -1.43
APOBEC1-202ENST00000467171 ORMDL1Q9P0S3 153 aa6.1□□□□□ -1.43
APOBEC1-202ENST00000467171 IGLV1-50A0A075B6I6 118 aa6.09□□□□□ -1.43
APOBEC1-202ENST00000467171 A0A087WTM6 91 aa6.09□□□□□ -1.43
APOBEC1-202ENST00000467171 TEX49A0A1B0GTD5 131 aa6.09□□□□□ -1.43
APOBEC1-202ENST00000467171 M0R2N4 97 aa6.09□□□□□ -1.43
APOBEC1-202ENST00000467171 PRYO14603 147 aa6.09□□□□□ -1.43
APOBEC1-202ENST00000467171 INAFM2P0DMQ5 153 aa6.09□□□□□ -1.43
APOBEC1-202ENST00000467171 DNAH6Q9C0G6 4158 aa6.09□□□□□ -1.43
APOBEC1-202ENST00000467171 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 A0A096LNI7 61 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 FAM168BA1KXE4 195 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 TMEM256-PLSCR3K7ERE1 68 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 SPRR1AP35321 89 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 SDIM1Q6ZPB5 146 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 MRPL55Q7Z7F7 128 aaKnown RBP6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 OBSCN-AS1Q96MR7 158 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 KRTAP17-1Q9BYP8 105 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 LINC00474Q9P2X8 69 aa6.08□□□□□ -1.44
APOBEC1-202ENST00000467171 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
APOBEC1-202ENST00000467171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.07□□□□□ -1.44
APOBEC1-202ENST00000467171 VPS25Q9BRG1 176 aa6.07□□□□□ -1.44
APOBEC1-202ENST00000467171 TENM2Q9NT68 2774 aa6.07□□□□□ -1.44
APOBEC1-202ENST00000467171 ALMS1Q8TCU4 4167 aa6.06□□□□□ -1.44
APOBEC1-202ENST00000467171 FAM240AA0A1B0GVK7 77 aa6.06□□□□□ -1.44
APOBEC1-202ENST00000467171 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
APOBEC1-202ENST00000467171 LY6G6CO95867 125 aa6.06□□□□□ -1.44
APOBEC1-202ENST00000467171 A0A1W2PNN7 141 aa6.05□□□□□ -1.44
APOBEC1-202ENST00000467171 EPM2AB3EWF7 344 aa6.05□□□□□ -1.44
APOBEC1-202ENST00000467171 FAM19A5Q7Z5A7 132 aaPredicted RBP6.05□□□□□ -1.44
APOBEC1-202ENST00000467171 DNAH2Q9P225 4427 aa6.04□□□□□ -1.44
APOBEC1-202ENST00000467171 JMJD7-PLA2G4BH0Y9G9 81 aa6.04□□□□□ -1.44
APOBEC1-202ENST00000467171 IGKV2-24A0A0C4DH68 120 aa6.03□□□□□ -1.44
APOBEC1-202ENST00000467171 B5MCH6 92 aa6.03□□□□□ -1.44
APOBEC1-202ENST00000467171 ACYP1P07311 99 aa6.03□□□□□ -1.44
APOBEC1-202ENST00000467171 Q6ZQY7 126 aa6.03□□□□□ -1.44
APOBEC1-202ENST00000467171 Q6ZRX8 168 aa6.03□□□□□ -1.44
APOBEC1-202ENST00000467171 CDIP1Q9H305 208 aa6.03□□□□□ -1.44
APOBEC1-202ENST00000467171 DHRS4-AS1Q9P1J3 65 aa6.03□□□□□ -1.44
APOBEC1-202ENST00000467171 DNAH17Q9UFH2 4485 aa6.02□□□□□ -1.45
APOBEC1-202ENST00000467171 ETDCA0A1B0GVM5 59 aa6.02□□□□□ -1.45
APOBEC1-202ENST00000467171 RPL37AP8A6NKH3 93 aa6.02□□□□□ -1.45
APOBEC1-202ENST00000467171 KMT2AQ03164 3969 aa6.01□□□□□ -1.45
APOBEC1-202ENST00000467171 RTL8CO15255 209 aa6.01□□□□□ -1.45
APOBEC1-202ENST00000467171 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
APOBEC1-202ENST00000467171 REG3GQ6UW15 175 aa6.01□□□□□ -1.45
APOBEC1-202ENST00000467171 SPACA4Q8TDM5 124 aa6□□□□□ -1.45
APOBEC1-202ENST00000467171 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
APOBEC1-202ENST00000467171 SIGMAR1Q99720 223 aa5.99□□□□□ -1.45
APOBEC1-202ENST00000467171 IGLV5-52A0A0A0MRZ9 124 aa5.98□□□□□ -1.45
APOBEC1-202ENST00000467171 H0Y9J4 135 aa5.98□□□□□ -1.45
APOBEC1-202ENST00000467171 PDE6GP18545 87 aa5.98□□□□□ -1.45
APOBEC1-202ENST00000467171 RBM3P98179 157 aaKnown RBP5.98□□□□□ -1.45
APOBEC1-202ENST00000467171 C21orf62-AS1Q17RA5 79 aa5.98□□□□□ -1.45
APOBEC1-202ENST00000467171 Q9BRP9 147 aa5.98□□□□□ -1.45
APOBEC1-202ENST00000467171 C14orf132Q9NPU4 83 aa5.98□□□□□ -1.45
APOBEC1-202ENST00000467171 IGLV5-48A0A075B6I7 105 aa5.97□□□□□ -1.45
APOBEC1-202ENST00000467171 LOC110117498A0A087WWA1 95 aa5.97□□□□□ -1.45
APOBEC1-202ENST00000467171 PANO1I0J062 215 aa5.97□□□□□ -1.45
APOBEC1-202ENST00000467171 CCKP06307 115 aa5.97□□□□□ -1.45
APOBEC1-202ENST00000467171 PHF5AQ7RTV0 110 aaKnown RBP5.97□□□□□ -1.45
APOBEC1-202ENST00000467171 LAMTOR3Q9UHA4 124 aa5.97□□□□□ -1.45
APOBEC1-202ENST00000467171 NDUFV3P56181 108 aaKnown RBP5.96□□□□□ -1.46
APOBEC1-202ENST00000467171 LINC01547P58512 204 aaPredicted RBP5.96□□□□□ -1.46
APOBEC1-202ENST00000467171 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
APOBEC1-202ENST00000467171 TGP01266 2768 aa5.95□□□□□ -1.46
APOBEC1-202ENST00000467171 UBE2BP63146 152 aa5.95□□□□□ -1.46
APOBEC1-202ENST00000467171 GAGE2AQ6NT46 116 aa5.95□□□□□ -1.46
APOBEC1-202ENST00000467171 Q8N377 158 aa5.95□□□□□ -1.46
APOBEC1-202ENST00000467171 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
APOBEC1-202ENST00000467171 PLAC8Q9NZF1 115 aa5.95□□□□□ -1.46
APOBEC1-202ENST00000467171 TRBV7-4A0A0J9YYF1 115 aa5.94□□□□□ -1.46
APOBEC1-202ENST00000467171 XGP55808 180 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms