RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 TENM2Q9NT68 2774 aa13.14□□□□□ -0.31
CCDC78-207ENST00000466708 FAM19A5Q7Z5A7 132 aaPredicted RBP13.13□□□□□ -0.31
CCDC78-207ENST00000466708 PLECQ15149 4684 aaKnown RBP13.13□□□□□ -0.31
CCDC78-207ENST00000466708 LRCOL1A6NCL2 159 aa13.13□□□□□ -0.31
CCDC78-207ENST00000466708 RBM3P98179 157 aaKnown RBP13.13□□□□□ -0.31
CCDC78-207ENST00000466708 C21orf62-AS1Q17RA5 79 aa13.13□□□□□ -0.31
CCDC78-207ENST00000466708 LINC00643Q86TS7 51 aa13.13□□□□□ -0.31
CCDC78-207ENST00000466708 PKIGQ9Y2B9 76 aa13.13□□□□□ -0.31
CCDC78-207ENST00000466708 SPRR1AP35321 89 aa13.12□□□□□ -0.31
CCDC78-207ENST00000466708 Q6Q795 121 aa13.12□□□□□ -0.31
CCDC78-207ENST00000466708 Q6ZRN7 208 aaPredicted RBP13.12□□□□□ -0.31
CCDC78-207ENST00000466708 DNAH7Q8WXX0 4024 aa13.11□□□□□ -0.31
CCDC78-207ENST00000466708 A0A1B0GV72 72 aa13.11□□□□□ -0.31
CCDC78-207ENST00000466708 RPL37AP8A6NKH3 93 aa13.11□□□□□ -0.31
CCDC78-207ENST00000466708 A0A096LNI7 61 aa13.11□□□□□ -0.31
CCDC78-207ENST00000466708 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.1□□□□□ -0.31
CCDC78-207ENST00000466708 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
CCDC78-207ENST00000466708 DNHD1Q96M86 4753 aa13.1□□□□□ -0.31
CCDC78-207ENST00000466708 KRTAP4-16G5E9R7 235 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-207ENST00000466708 DHRS4-AS1Q9P1J3 65 aa13.09□□□□□ -0.31
CCDC78-207ENST00000466708 LOC110117498A0A087WWA1 95 aa13.08□□□□□ -0.32
CCDC78-207ENST00000466708 Q6ZRX8 168 aa13.08□□□□□ -0.32
CCDC78-207ENST00000466708 C9orf163Q8N9P6 203 aa13.08□□□□□ -0.32
CCDC78-207ENST00000466708 ETDCA0A1B0GVM5 59 aa13.07□□□□□ -0.32
CCDC78-207ENST00000466708 B5MCH6 92 aa13.07□□□□□ -0.32
CCDC78-207ENST00000466708 PDE6GP18545 87 aa13.07□□□□□ -0.32
CCDC78-207ENST00000466708 DNAH10Q8IVF4 4471 aa13.07□□□□□ -0.32
CCDC78-207ENST00000466708 TRBV7-7A0A0K0K1E9 115 aa13.06□□□□□ -0.32
CCDC78-207ENST00000466708 IGKV2-24A0A0C4DH68 120 aa13.06□□□□□ -0.32
CCDC78-207ENST00000466708 DSCR8Q96T75 97 aa13.05□□□□□ -0.32
CCDC78-207ENST00000466708 IMUPQ9GZP8 106 aa13.05□□□□□ -0.32
CCDC78-207ENST00000466708 Q6ZQT0 140 aa13.04□□□□□ -0.32
CCDC78-207ENST00000466708 LINC00846Q9NV44 126 aa13.04□□□□□ -0.32
CCDC78-207ENST00000466708 M0R2N4 97 aa13.03□□□□□ -0.32
CCDC78-207ENST00000466708 NDUFV3P56181 108 aaKnown RBP13.03□□□□□ -0.32
CCDC78-207ENST00000466708 REG3GQ6UW15 175 aa13.03□□□□□ -0.32
CCDC78-207ENST00000466708 STARD9Q9P2P6 4700 aa13.02□□□□□ -0.32
CCDC78-207ENST00000466708 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.33
CCDC78-207ENST00000466708 A0A1W2PNN7 141 aa13.02□□□□□ -0.33
CCDC78-207ENST00000466708 Q6ZR54 194 aa13□□□□□ -0.33
CCDC78-207ENST00000466708 Q9BRP9 147 aa13□□□□□ -0.33
CCDC78-207ENST00000466708 LINC00474Q9P2X8 69 aa13□□□□□ -0.33
CCDC78-207ENST00000466708 TRBV7-4A0A0J9YYF1 115 aa12.99□□□□□ -0.33
CCDC78-207ENST00000466708 Q6JHZ5 121 aa12.96□□□□□ -0.33
CCDC78-207ENST00000466708 A0A087WTM6 91 aa12.95□□□□□ -0.34
CCDC78-207ENST00000466708 Q8N377 158 aa12.95□□□□□ -0.34
CCDC78-207ENST00000466708 CHTF8P0CG12 524 aa12.95□□□□□ -0.34
CCDC78-207ENST00000466708 LINC01547P58512 204 aaPredicted RBP12.94□□□□□ -0.34
CCDC78-207ENST00000466708 UBE2BP63146 152 aa12.93□□□□□ -0.34
CCDC78-207ENST00000466708 DEFB105AQ8NG35 78 aa12.92□□□□□ -0.34
CCDC78-207ENST00000466708 UBL5Q9BZL1 73 aa12.92□□□□□ -0.34
CCDC78-207ENST00000466708 IGLV5-48A0A075B6I7 105 aa12.92□□□□□ -0.34
CCDC78-207ENST00000466708 ATP5EP2Q5VTU8 51 aa12.89□□□□□ -0.35
CCDC78-207ENST00000466708 FBN3Q75N90 2809 aa12.89□□□□□ -0.35
CCDC78-207ENST00000466708 PHF5AQ7RTV0 110 aaKnown RBP12.88□□□□□ -0.35
CCDC78-207ENST00000466708 WWC2-AS2Q96NR7 200 aa12.88□□□□□ -0.35
CCDC78-207ENST00000466708 ERC2-IT1O76042 136 aa12.88□□□□□ -0.35
CCDC78-207ENST00000466708 FAM19A1Q7Z5A9 133 aa12.88□□□□□ -0.35
CCDC78-207ENST00000466708 C1orf134Q5TEV5 83 aa12.87□□□□□ -0.35
CCDC78-207ENST00000466708 ANAPC13Q9BS18 74 aa12.87□□□□□ -0.35
CCDC78-207ENST00000466708 ST20-AS1Q8NBB2 130 aa12.86□□□□□ -0.35
CCDC78-207ENST00000466708 IGKV3D-7A0A0C4DH55 119 aa12.85□□□□□ -0.35
CCDC78-207ENST00000466708 LY6G6CO95867 125 aa12.85□□□□□ -0.35
CCDC78-207ENST00000466708 H0Y9J4 135 aa12.84□□□□□ -0.35
CCDC78-207ENST00000466708 SPACA4Q8TDM5 124 aa12.84□□□□□ -0.35
CCDC78-207ENST00000466708 EPM2AB3EWF7 344 aa12.83□□□□□ -0.35
CCDC78-207ENST00000466708 DPH3Q96FX2 82 aa12.83□□□□□ -0.35
CCDC78-207ENST00000466708 PANO1I0J062 215 aa12.82□□□□□ -0.36
CCDC78-207ENST00000466708 RTL8CO15255 209 aa12.82□□□□□ -0.36
CCDC78-207ENST00000466708 PRLHP81277 87 aa12.82□□□□□ -0.36
CCDC78-207ENST00000466708 FAM236AA0A1B0GUQ0 79 aa12.81□□□□□ -0.36
CCDC78-207ENST00000466708 FAM236BA0A1B0GV22 79 aa12.81□□□□□ -0.36
CCDC78-207ENST00000466708 TNP2Q05952 138 aa12.81□□□□□ -0.36
CCDC78-207ENST00000466708 KRTAP11-1Q8IUC1 163 aa12.81□□□□□ -0.36
CCDC78-207ENST00000466708 LINC00476Q8WZB0 136 aa12.81□□□□□ -0.36
CCDC78-207ENST00000466708 Q6ZVQ6 151 aa12.8□□□□□ -0.36
CCDC78-207ENST00000466708 C3orf22Q8N5N4 141 aa12.79□□□□□ -0.36
CCDC78-207ENST00000466708 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.79□□□□□ -0.36
CCDC78-207ENST00000466708 HIGD2AQ9BW72 106 aa12.78□□□□□ -0.36
CCDC78-207ENST00000466708 A0A1B0GW54 56 aa12.78□□□□□ -0.36
CCDC78-207ENST00000466708 C1orf137Q5JT78 98 aa12.75□□□□□ -0.37
CCDC78-207ENST00000466708 BCE1O60756 84 aa12.74□□□□□ -0.37
CCDC78-207ENST00000466708 HIST1H4AP62805 103 aaKnown RBP12.74□□□□□ -0.37
CCDC78-207ENST00000466708 SMIM29Q86T20 159 aa12.74□□□□□ -0.37
CCDC78-207ENST00000466708 KMT2AQ03164 3969 aa12.74□□□□□ -0.37
CCDC78-207ENST00000466708 IGLV5-52A0A0A0MRZ9 124 aa12.74□□□□□ -0.37
CCDC78-207ENST00000466708 C3orf84H3BNL1 204 aa12.74□□□□□ -0.37
CCDC78-207ENST00000466708 UBE2AP49459 152 aa12.74□□□□□ -0.37
CCDC78-207ENST00000466708 TGP01266 2768 aa12.73□□□□□ -0.37
CCDC78-207ENST00000466708 F8WEM9 126 aa12.73□□□□□ -0.37
CCDC78-207ENST00000466708 FUSP35637 526 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCDC78-207ENST00000466708 CXCL6P80162 114 aa12.73□□□□□ -0.37
CCDC78-207ENST00000466708 HAMPP81172 84 aa12.72□□□□□ -0.37
CCDC78-207ENST00000466708 PLAC8Q9NZF1 115 aa12.69□□□□□ -0.38
CCDC78-207ENST00000466708 DNAH2Q9P225 4427 aa12.69□□□□□ -0.38
CCDC78-207ENST00000466708 SPRR1BP22528 89 aa12.69□□□□□ -0.38
CCDC78-207ENST00000466708 Q8NBF4 154 aa12.69□□□□□ -0.38
CCDC78-207ENST00000466708 DNAH6Q9C0G6 4158 aa12.68□□□□□ -0.38
CCDC78-207ENST00000466708 A0A087WVE0 104 aa12.68□□□□□ -0.38
CCDC78-207ENST00000466708 A0A1W2PNM2 257 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms