RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
COL6A1-203ENST00000466285 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
COL6A1-203ENST00000466285 IGLV9-49A0A0B4J1Y8 123 aa11.5□□□□□ -0.57
COL6A1-203ENST00000466285 C20orf202A1L168 122 aa11.49□□□□□ -0.57
COL6A1-203ENST00000466285 Q8N377 158 aa11.49□□□□□ -0.57
COL6A1-203ENST00000466285 AKR1D1P51857 326 aa11.48□□□□□ -0.57
COL6A1-203ENST00000466285 E9PLD3 99 aa11.47□□□□□ -0.57
COL6A1-203ENST00000466285 LEPROTO15243 131 aa11.47□□□□□ -0.57
COL6A1-203ENST00000466285 SPINK1P00995 79 aa11.47□□□□□ -0.57
COL6A1-203ENST00000466285 HERV-K104P63124 156 aa11.46□□□□□ -0.57
COL6A1-203ENST00000466285 HERVK_113P61574 105 aa11.45□□□□□ -0.58
COL6A1-203ENST00000466285 EIF4EBP3O60516 100 aaPredicted RBP11.44□□□□□ -0.58
COL6A1-203ENST00000466285 DDTP30046 118 aa11.43□□□□□ -0.58
COL6A1-203ENST00000466285 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
COL6A1-203ENST00000466285 J3QQQ9 107 aa11.42□□□□□ -0.58
COL6A1-203ENST00000466285 Q6ZRX8 168 aa11.42□□□□□ -0.58
COL6A1-203ENST00000466285 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
COL6A1-203ENST00000466285 SOSTDC1Q6X4U4 206 aa11.41□□□□□ -0.58
COL6A1-203ENST00000466285 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
COL6A1-203ENST00000466285 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
COL6A1-203ENST00000466285 NMUP48645 174 aa11.4□□□□□ -0.58
COL6A1-203ENST00000466285 JOSD1Q15040 202 aaPredicted RBP11.4□□□□□ -0.58
COL6A1-203ENST00000466285 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
COL6A1-203ENST00000466285 LCE2CQ5TA81 110 aa11.4□□□□□ -0.58
COL6A1-203ENST00000466285 XP32Q5T750 250 aa11.39□□□□□ -0.59
COL6A1-203ENST00000466285 ST20-AS1Q8NBB2 130 aa11.39□□□□□ -0.59
COL6A1-203ENST00000466285 TRBV10-2A0A0K0K1G8 114 aa11.37□□□□□ -0.59
COL6A1-203ENST00000466285 IGLV6-57P01721 117 aa11.37□□□□□ -0.59
COL6A1-203ENST00000466285 LINC01547P58512 204 aaPredicted RBP11.37□□□□□ -0.59
COL6A1-203ENST00000466285 SEC61BP60468 96 aaKnown RBP11.37□□□□□ -0.59
COL6A1-203ENST00000466285 NPC2P61916 151 aa11.37□□□□□ -0.59
COL6A1-203ENST00000466285 RPS29P62273 56 aaKnown RBP11.37□□□□□ -0.59
COL6A1-203ENST00000466285 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
COL6A1-203ENST00000466285 KRTAP19-2Q3LHN2 52 aa11.36□□□□□ -0.59
COL6A1-203ENST00000466285 SSBP3-AS1Q7Z2R9 100 aa11.36□□□□□ -0.59
COL6A1-203ENST00000466285 SPANXB1Q9NS25 103 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-203ENST00000466285 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
COL6A1-203ENST00000466285 LINC00587B1AMM8 73 aa11.34□□□□□ -0.59
COL6A1-203ENST00000466285 PYY3Q5JQD4 70 aa11.34□□□□□ -0.59
COL6A1-203ENST00000466285 C9orf153Q5TBE3 101 aa11.34□□□□□ -0.59
COL6A1-203ENST00000466285 TRAV23DV6A0A075B6W5 121 aa11.33□□□□□ -0.6
COL6A1-203ENST00000466285 SLC25A20O43772 301 aa11.33□□□□□ -0.6
COL6A1-203ENST00000466285 ADAMTSL4-AS1Q5T5F5 129 aa11.33□□□□□ -0.6
COL6A1-203ENST00000466285 LCE2DQ5TA82 110 aaPredicted RBP11.33□□□□□ -0.6
COL6A1-203ENST00000466285 TTTY13Q9BZ97 58 aa11.32□□□□□ -0.6
COL6A1-203ENST00000466285 FSIP2Q5CZC0 6907 aa11.32□□□□□ -0.6
COL6A1-203ENST00000466285 A0A0J9YXY3 114 aa11.31□□□□□ -0.6
COL6A1-203ENST00000466285 S100A12P80511 92 aa11.31□□□□□ -0.6
COL6A1-203ENST00000466285 S100A7L2Q5SY68 101 aa11.3□□□□□ -0.6
COL6A1-203ENST00000466285 LITAFQ99732 161 aa11.3□□□□□ -0.6
COL6A1-203ENST00000466285 NDUFC2O95298 119 aa11.29□□□□□ -0.6
COL6A1-203ENST00000466285 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
COL6A1-203ENST00000466285 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
COL6A1-203ENST00000466285 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
COL6A1-203ENST00000466285 MIEN1Q9BRT3 115 aa11.28□□□□□ -0.6
COL6A1-203ENST00000466285 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
COL6A1-203ENST00000466285 TIMM17BO60830 172 aa11.27□□□□□ -0.61
COL6A1-203ENST00000466285 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
COL6A1-203ENST00000466285 LOC105371267A0A1B0GV96 52 aa11.24□□□□□ -0.61
COL6A1-203ENST00000466285 MT1HP80294 61 aa11.23□□□□□ -0.61
COL6A1-203ENST00000466285 C9orf92A6NGG3 77 aa11.22□□□□□ -0.61
COL6A1-203ENST00000466285 DLEU1O43261 78 aa11.22□□□□□ -0.61
COL6A1-203ENST00000466285 COX8AP10176 69 aa11.22□□□□□ -0.61
COL6A1-203ENST00000466285 VAMP8Q9BV40 100 aa11.22□□□□□ -0.61
COL6A1-203ENST00000466285 PCOTHQ58A44 107 aa11.21□□□□□ -0.61
COL6A1-203ENST00000466285 CRCT1Q9UGL9 99 aa11.21□□□□□ -0.61
COL6A1-203ENST00000466285 PAM16Q9Y3D7 125 aa11.21□□□□□ -0.61
COL6A1-203ENST00000466285 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
COL6A1-203ENST00000466285 SPRR1BP22528 89 aa11.19□□□□□ -0.62
COL6A1-203ENST00000466285 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
COL6A1-203ENST00000466285 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
COL6A1-203ENST00000466285 LINC00308Q8TCZ7 52 aa11.17□□□□□ -0.62
COL6A1-203ENST00000466285 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
COL6A1-203ENST00000466285 IGLV8-61A0A075B6I0 122 aa11.15□□□□□ -0.62
COL6A1-203ENST00000466285 SMIM6P0DI80 62 aa11.15□□□□□ -0.62
COL6A1-203ENST00000466285 Q6ZVH6 145 aa11.14□□□□□ -0.63
COL6A1-203ENST00000466285 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
COL6A1-203ENST00000466285 C14orf144Q96I85 54 aa11.13□□□□□ -0.63
COL6A1-203ENST00000466285 A0A0G2JQZ4 141 aa11.12□□□□□ -0.63
COL6A1-203ENST00000466285 Q1RN00 199 aa11.12□□□□□ -0.63
COL6A1-203ENST00000466285 H7C2G1 150 aa11.11□□□□□ -0.63
COL6A1-203ENST00000466285 IFITM1P13164 125 aa11.11□□□□□ -0.63
COL6A1-203ENST00000466285 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
COL6A1-203ENST00000466285 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
COL6A1-203ENST00000466285 LIMD2Q9BT23 127 aa11.11□□□□□ -0.63
COL6A1-203ENST00000466285 HIGD1BQ9P298 99 aa11.11□□□□□ -0.63
COL6A1-203ENST00000466285 FLGP20930 4061 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-203ENST00000466285 ELOF1P60002 83 aaKnown RBP11.09□□□□□ -0.63
COL6A1-203ENST00000466285 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
COL6A1-203ENST00000466285 DHRS4-AS1Q9P1J3 65 aa11.08□□□□□ -0.64
COL6A1-203ENST00000466285 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
COL6A1-203ENST00000466285 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-203ENST00000466285 COX7BP24311 80 aa11.06□□□□□ -0.64
COL6A1-203ENST00000466285 HINT1P49773 126 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-203ENST00000466285 SMIM29Q86T20 159 aa11.06□□□□□ -0.64
COL6A1-203ENST00000466285 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
COL6A1-203ENST00000466285 LAMTOR3Q9UHA4 124 aa11.06□□□□□ -0.64
COL6A1-203ENST00000466285 COPS9Q8WXC6 57 aa11.05□□□□□ -0.64
COL6A1-203ENST00000466285 KRTAP10-6P60371 365 aaPredicted RBP11.04□□□□□ -0.64
COL6A1-203ENST00000466285 UQCR10Q9UDW1 63 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms