RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ELOF1P60002 83 aaKnown RBP9.39□□□□□ -0.91
COL5A1-205ENST00000464187 ALMS1Q8TCU4 4167 aa9.38□□□□□ -0.91
COL5A1-205ENST00000464187 LRCOL1A6NCL2 159 aa9.38□□□□□ -0.91
COL5A1-205ENST00000464187 ANAPC13Q9BS18 74 aa9.38□□□□□ -0.91
COL5A1-205ENST00000464187 TRBV7-6A0A0J9YX20 115 aa9.38□□□□□ -0.91
COL5A1-205ENST00000464187 CCKP06307 115 aa9.38□□□□□ -0.91
COL5A1-205ENST00000464187 TLX1NBP0CAT3 122 aa9.38□□□□□ -0.91
COL5A1-205ENST00000464187 Q6ZQY7 126 aa9.38□□□□□ -0.91
COL5A1-205ENST00000464187 LINC00846Q9NV44 126 aa9.37□□□□□ -0.91
COL5A1-205ENST00000464187 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
COL5A1-205ENST00000464187 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
COL5A1-205ENST00000464187 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
COL5A1-205ENST00000464187 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
COL5A1-205ENST00000464187 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
COL5A1-205ENST00000464187 DNAH6Q9C0G6 4158 aa9.34□□□□□ -0.91
COL5A1-205ENST00000464187 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
COL5A1-205ENST00000464187 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.33□□□□□ -0.92
COL5A1-205ENST00000464187 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
COL5A1-205ENST00000464187 H3BQ85 93 aa9.33□□□□□ -0.92
COL5A1-205ENST00000464187 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
COL5A1-205ENST00000464187 C7orf33Q8WU49 177 aa9.33□□□□□ -0.92
COL5A1-205ENST00000464187 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
COL5A1-205ENST00000464187 A0A087WTM6 91 aa9.32□□□□□ -0.92
COL5A1-205ENST00000464187 LAMTOR3Q9UHA4 124 aa9.32□□□□□ -0.92
COL5A1-205ENST00000464187 HYDINQ4G0P3 5121 aa9.32□□□□□ -0.92
COL5A1-205ENST00000464187 RBM3P98179 157 aaKnown RBP9.31□□□□□ -0.92
COL5A1-205ENST00000464187 Q6JHZ5 121 aa9.31□□□□□ -0.92
COL5A1-205ENST00000464187 Q6ZQT0 140 aa9.31□□□□□ -0.92
COL5A1-205ENST00000464187 SACSQ9NZJ4 4579 aa9.3□□□□□ -0.92
COL5A1-205ENST00000464187 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
COL5A1-205ENST00000464187 FAM236AA0A1B0GUQ0 79 aa9.3□□□□□ -0.92
COL5A1-205ENST00000464187 FAM236BA0A1B0GV22 79 aa9.3□□□□□ -0.92
COL5A1-205ENST00000464187 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
COL5A1-205ENST00000464187 IGLV5-37A0A075B6J1 123 aa9.29□□□□□ -0.92
COL5A1-205ENST00000464187 FAM168BA1KXE4 195 aa9.29□□□□□ -0.92
COL5A1-205ENST00000464187 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
COL5A1-205ENST00000464187 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
COL5A1-205ENST00000464187 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
COL5A1-205ENST00000464187 LOC107984640A0A0U1RRK4 108 aa9.27□□□□□ -0.93
COL5A1-205ENST00000464187 LCE6AA0A183 80 aa9.26□□□□□ -0.93
COL5A1-205ENST00000464187 C9orf163Q8N9P6 203 aa9.26□□□□□ -0.93
COL5A1-205ENST00000464187 RTL8CO15255 209 aa9.25□□□□□ -0.93
COL5A1-205ENST00000464187 GHRHP01286 108 aa9.25□□□□□ -0.93
COL5A1-205ENST00000464187 TNP2Q05952 138 aa9.25□□□□□ -0.93
COL5A1-205ENST00000464187 DSCR8Q96T75 97 aa9.25□□□□□ -0.93
COL5A1-205ENST00000464187 RPL37AP8A6NKH3 93 aa9.24□□□□□ -0.93
COL5A1-205ENST00000464187 PRYO14603 147 aa9.24□□□□□ -0.93
COL5A1-205ENST00000464187 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
COL5A1-205ENST00000464187 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
COL5A1-205ENST00000464187 CCDC179H3BU77 68 aa9.23□□□□□ -0.93
COL5A1-205ENST00000464187 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
COL5A1-205ENST00000464187 FRAS1Q86XX4 4008 aa9.23□□□□□ -0.93
COL5A1-205ENST00000464187 TRBV7-4A0A0J9YYF1 115 aa9.22□□□□□ -0.93
COL5A1-205ENST00000464187 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
COL5A1-205ENST00000464187 A0A096LNI7 61 aa9.21□□□□□ -0.93
COL5A1-205ENST00000464187 PDE6GP18545 87 aa9.21□□□□□ -0.93
COL5A1-205ENST00000464187 FUSP35637 526 aaKnown RBP eCLIP9.21□□□□□ -0.93
COL5A1-205ENST00000464187 HIST1H4AP62805 103 aaKnown RBP9.21□□□□□ -0.93
COL5A1-205ENST00000464187 IGKV2-24A0A0C4DH68 120 aa9.21□□□□□ -0.94
COL5A1-205ENST00000464187 SPRR1AP35321 89 aa9.21□□□□□ -0.94
COL5A1-205ENST00000464187 MRPL55Q7Z7F7 128 aaKnown RBP9.21□□□□□ -0.94
COL5A1-205ENST00000464187 B5MCH6 92 aa9.2□□□□□ -0.94
COL5A1-205ENST00000464187 ATP5EP2Q5VTU8 51 aa9.2□□□□□ -0.94
COL5A1-205ENST00000464187 Q6ZRX8 168 aa9.2□□□□□ -0.94
COL5A1-205ENST00000464187 UBL5Q9BZL1 73 aa9.2□□□□□ -0.94
COL5A1-205ENST00000464187 FAT2Q9NYQ8 4349 aa9.19□□□□□ -0.94
COL5A1-205ENST00000464187 Q9BRP9 147 aa9.19□□□□□ -0.94
COL5A1-205ENST00000464187 KMT2CQ8NEZ4 4911 aaKnown RBP9.18□□□□□ -0.94
COL5A1-205ENST00000464187 A0A087WVE0 104 aa9.18□□□□□ -0.94
COL5A1-205ENST00000464187 ETDCA0A1B0GVM5 59 aa9.18□□□□□ -0.94
COL5A1-205ENST00000464187 PKIGQ9Y2B9 76 aa9.18□□□□□ -0.94
COL5A1-205ENST00000464187 HECTD4Q9Y4D8 3996 aa9.18□□□□□ -0.94
COL5A1-205ENST00000464187 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
COL5A1-205ENST00000464187 CHTF8P0CG12 524 aa9.17□□□□□ -0.94
COL5A1-205ENST00000464187 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
COL5A1-205ENST00000464187 LINC01547P58512 204 aaPredicted RBP9.17□□□□□ -0.94
COL5A1-205ENST00000464187 Q8N377 158 aa9.17□□□□□ -0.94
COL5A1-205ENST00000464187 Q6ZVQ6 151 aa9.15□□□□□ -0.94
COL5A1-205ENST00000464187 DEFB105AQ8NG35 78 aa9.15□□□□□ -0.94
COL5A1-205ENST00000464187 LINC00474Q9P2X8 69 aa9.15□□□□□ -0.95
COL5A1-205ENST00000464187 DNAH11Q96DT5 4516 aa9.14□□□□□ -0.95
COL5A1-205ENST00000464187 A0A1W2PNN7 141 aa9.14□□□□□ -0.95
COL5A1-205ENST00000464187 KRTAP10-2P60368 255 aa9.14□□□□□ -0.95
COL5A1-205ENST00000464187 ATOX1O00244 68 aa9.13□□□□□ -0.95
COL5A1-205ENST00000464187 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
COL5A1-205ENST00000464187 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
COL5A1-205ENST00000464187 PANO1I0J062 215 aa9.12□□□□□ -0.95
COL5A1-205ENST00000464187 ST20-AS1Q8NBB2 130 aa9.12□□□□□ -0.95
COL5A1-205ENST00000464187 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
COL5A1-205ENST00000464187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
COL5A1-205ENST00000464187 IGLV5-48A0A075B6I7 105 aa9.1□□□□□ -0.95
COL5A1-205ENST00000464187 C3orf22Q8N5N4 141 aa9.1□□□□□ -0.95
COL5A1-205ENST00000464187 RYR2Q92736 4967 aa9.1□□□□□ -0.95
COL5A1-205ENST00000464187 DNAH5Q8TE73 4624 aa9.1□□□□□ -0.95
COL5A1-205ENST00000464187 UBE2BP63146 152 aa9.1□□□□□ -0.95
COL5A1-205ENST00000464187 SPACA4Q8TDM5 124 aa9.1□□□□□ -0.95
COL5A1-205ENST00000464187 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
COL5A1-205ENST00000464187 HAMPP81172 84 aa9.09□□□□□ -0.95
COL5A1-205ENST00000464187 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
COL5A1-205ENST00000464187 PKD1P98161 4303 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms