RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 C11orf45Q8TAV5 145 aa3.15□□□□□ -1.91
VPS72-203ENST00000463470 PKIGQ9Y2B9 76 aa3.15□□□□□ -1.91
VPS72-203ENST00000463470 DEFB131BA0A096LNP1 70 aa3.14□□□□□ -1.91
VPS72-203ENST00000463470 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
VPS72-203ENST00000463470 SLPIP03973 132 aa3.14□□□□□ -1.91
VPS72-203ENST00000463470 SYCNQ0VAF6 134 aa3.14□□□□□ -1.91
VPS72-203ENST00000463470 C9orf116Q5BN46 136 aaPredicted RBP3.14□□□□□ -1.91
VPS72-203ENST00000463470 Q6ZQT0 140 aa3.14□□□□□ -1.91
VPS72-203ENST00000463470 DHRS4-AS1Q9P1J3 65 aa3.14□□□□□ -1.91
VPS72-203ENST00000463470 VPREB1P12018 145 aa3.13□□□□□ -1.91
VPS72-203ENST00000463470 RPS28P62857 69 aaKnown RBP3.13□□□□□ -1.91
VPS72-203ENST00000463470 PRR3P79522 188 aaKnown RBP3.13□□□□□ -1.91
VPS72-203ENST00000463470 C10orf25Q5T742 122 aa3.13□□□□□ -1.91
VPS72-203ENST00000463470 Q6ZQY7 126 aa3.13□□□□□ -1.91
VPS72-203ENST00000463470 NKAPP1Q8N9T2 125 aa3.13□□□□□ -1.91
VPS72-203ENST00000463470 MRAPQ8TCY5 172 aa3.13□□□□□ -1.91
VPS72-203ENST00000463470 B9D2Q9BPU9 175 aa3.13□□□□□ -1.91
VPS72-203ENST00000463470 DNAH9Q9NYC9 4486 aa3.13□□□□□ -1.91
VPS72-203ENST00000463470 IGLV5-37A0A075B6J1 123 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 IGKV2D-24A0A075B6R9 120 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 IGKV3D-7A0A0C4DH55 119 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 TRBV7-4A0A0J9YYF1 115 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 LOC107984640A0A0U1RRK4 108 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 PRYO14603 147 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 TMEM258P61165 79 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 ESRGQ1W209 222 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 KRTAP26-1Q6PEX3 210 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 Q6ZTC4 211 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 WFDC10BQ8IUB3 73 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 KCNQ1DNQ9H478 68 aa3.12□□□□□ -1.91
VPS72-203ENST00000463470 Q6ZRU5 148 aa3.11□□□□□ -1.91
VPS72-203ENST00000463470 Q8N3U1 123 aa3.11□□□□□ -1.91
VPS72-203ENST00000463470 C15orf56Q8N910 161 aa3.11□□□□□ -1.91
VPS72-203ENST00000463470 UPK3BQ9BT76 320 aa3.11□□□□□ -1.91
VPS72-203ENST00000463470 XAGE1AQ9HD64 81 aa3.11□□□□□ -1.91
VPS72-203ENST00000463470 SS18L2Q9UHA2 77 aa3.11□□□□□ -1.91
VPS72-203ENST00000463470 TRAV7A0A075B6U4 112 aa3.1□□□□□ -1.91
VPS72-203ENST00000463470 J3KT08 172 aa3.1□□□□□ -1.91
VPS72-203ENST00000463470 NDUFC1O43677 76 aa3.1□□□□□ -1.91
VPS72-203ENST00000463470 FUSP35637 526 aaKnown RBP eCLIP3.1□□□□□ -1.91
VPS72-203ENST00000463470 LINC01547P58512 204 aaPredicted RBP3.1□□□□□ -1.91
VPS72-203ENST00000463470 HIGD2BQ4VC39 106 aa3.1□□□□□ -1.91
VPS72-203ENST00000463470 C14orf177Q52M58 125 aa3.1□□□□□ -1.91
VPS72-203ENST00000463470 C9orf129Q5T035 196 aaKnown RBP3.1□□□□□ -1.91
VPS72-203ENST00000463470 WWC2-AS2Q96NR7 200 aa3.1□□□□□ -1.91
VPS72-203ENST00000463470 DNAH7Q8WXX0 4024 aa3.09□□□□□ -1.91
VPS72-203ENST00000463470 RYR2Q92736 4967 aa3.09□□□□□ -1.91
VPS72-203ENST00000463470 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
VPS72-203ENST00000463470 HAMPP81172 84 aa3.09□□□□□ -1.91
VPS72-203ENST00000463470 Q6ZVQ6 151 aa3.09□□□□□ -1.91
VPS72-203ENST00000463470 Q8NDZ9 215 aa3.09□□□□□ -1.91
VPS72-203ENST00000463470 TM2D3Q9BRN9 247 aa3.09□□□□□ -1.91
VPS72-203ENST00000463470 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
VPS72-203ENST00000463470 LYSTQ99698 3801 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 IGLV5-48A0A075B6I7 105 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 ETDCA0A1B0GVM5 59 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 RPL37AP8A6NKH3 93 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 ERC2-IT1O76042 136 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 NREPQ16612 68 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 Q6ZRP5 223 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 Q6ZRX8 168 aa3.08□□□□□ -1.92
VPS72-203ENST00000463470 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
VPS72-203ENST00000463470 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
VPS72-203ENST00000463470 SPRR1AP35321 89 aa3.07□□□□□ -1.92
VPS72-203ENST00000463470 ATP5EP56381 51 aaPredicted RBP3.07□□□□□ -1.92
VPS72-203ENST00000463470 C7orf33Q8WU49 177 aa3.07□□□□□ -1.92
VPS72-203ENST00000463470 RETNQ9HD89 108 aa3.07□□□□□ -1.92
VPS72-203ENST00000463470 A0A087WVE0 104 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 F8WEM9 126 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 C3orf84H3BNL1 204 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 BPY2O14599 106 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 KLKP1Q107X0 134 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 CASC10Q5T4H9 136 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 MRPL55Q7Z7F7 128 aaKnown RBP3.06□□□□□ -1.92
VPS72-203ENST00000463470 STARD9Q9P2P6 4700 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 LINC00588Q9Y4M8 146 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 DNAH1Q9P2D7 4330 aa3.06□□□□□ -1.92
VPS72-203ENST00000463470 CNBPP62633 177 aaKnown RBP3.05□□□□□ -1.92
VPS72-203ENST00000463470 FAM19A1Q7Z5A9 133 aa3.05□□□□□ -1.92
VPS72-203ENST00000463470 LINC00474Q9P2X8 69 aa3.05□□□□□ -1.92
VPS72-203ENST00000463470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.05□□□□□ -1.92
VPS72-203ENST00000463470 BIRC6Q9NR09 4857 aa3.05□□□□□ -1.92
VPS72-203ENST00000463470 SACSQ9NZJ4 4579 aa3.05□□□□□ -1.92
VPS72-203ENST00000463470 LCE6AA0A183 80 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 C16orf90A8MZG2 172 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 KRTAP4-16G5E9R7 235 aaPredicted RBP3.04□□□□□ -1.92
VPS72-203ENST00000463470 H0Y9J4 135 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 PSCAO43653 123 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 REG3GQ6UW15 175 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 Q8N377 158 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 Q8NBF4 154 aa3.04□□□□□ -1.92
VPS72-203ENST00000463470 HUWE1Q7Z6Z7 4374 aaKnown RBP3.04□□□□□ -1.92
VPS72-203ENST00000463470 FAM236DA0A1B0GTK5 79 aa3.03□□□□□ -1.92
VPS72-203ENST00000463470 FAM236CP0DP71 79 aa3.03□□□□□ -1.92
VPS72-203ENST00000463470 UBE2BP63146 152 aa3.03□□□□□ -1.92
VPS72-203ENST00000463470 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
VPS72-203ENST00000463470 UBE2DNLQ8IWF7 75 aa3.03□□□□□ -1.92
VPS72-203ENST00000463470 C20orf197Q8N268 126 aa3.03□□□□□ -1.92
VPS72-203ENST00000463470 DPH3Q96FX2 82 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms