RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-212ENST00000461239 IGLV8-61A0A075B6I0 122 aa4.95□□□□□ -1.62
ECHDC1-212ENST00000461239 FAM168BA1KXE4 195 aa4.95□□□□□ -1.62
ECHDC1-212ENST00000461239 H3BRM9 83 aa4.95□□□□□ -1.62
ECHDC1-212ENST00000461239 CKS1BP61024 79 aa4.95□□□□□ -1.62
ECHDC1-212ENST00000461239 C9orf129Q5T035 196 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-212ENST00000461239 LINC01545Q5VT33 79 aa4.95□□□□□ -1.62
ECHDC1-212ENST00000461239 MTURNQ8N3F0 131 aa4.95□□□□□ -1.62
ECHDC1-212ENST00000461239 NDUFC2-KCTD14E9PQ53 114 aa4.94□□□□□ -1.62
ECHDC1-212ENST00000461239 SLC25A34Q6PIV7 304 aa4.94□□□□□ -1.62
ECHDC1-212ENST00000461239 DPH3Q96FX2 82 aa4.94□□□□□ -1.62
ECHDC1-212ENST00000461239 ZNF625Q96I27 306 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-212ENST00000461239 LINC00474Q9P2X8 69 aa4.94□□□□□ -1.62
ECHDC1-212ENST00000461239 CBY1Q9Y3M2 126 aa4.94□□□□□ -1.62
ECHDC1-212ENST00000461239 FLG2Q5D862 2391 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-212ENST00000461239 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
ECHDC1-212ENST00000461239 CXCL5P42830 114 aa4.93□□□□□ -1.62
ECHDC1-212ENST00000461239 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
ECHDC1-212ENST00000461239 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-212ENST00000461239 KRTAP11-1Q8IUC1 163 aa4.93□□□□□ -1.62
ECHDC1-212ENST00000461239 DSCR10P59022 87 aa4.92□□□□□ -1.62
ECHDC1-212ENST00000461239 PHF5AQ7RTV0 110 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-212ENST00000461239 XAGE1AQ9HD64 81 aa4.92□□□□□ -1.62
ECHDC1-212ENST00000461239 PKIGQ9Y2B9 76 aa4.92□□□□□ -1.62
ECHDC1-212ENST00000461239 DPM2O94777 84 aa4.91□□□□□ -1.62
ECHDC1-212ENST00000461239 IGKCP01834 107 aa4.91□□□□□ -1.62
ECHDC1-212ENST00000461239 COX8AP10176 69 aa4.91□□□□□ -1.62
ECHDC1-212ENST00000461239 PLNP26678 52 aa4.91□□□□□ -1.62
ECHDC1-212ENST00000461239 RPL37AP61513 92 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-212ENST00000461239 LEPROTO15243 131 aa4.9□□□□□ -1.63
ECHDC1-212ENST00000461239 INAFM2P0DMQ5 153 aa4.9□□□□□ -1.63
ECHDC1-212ENST00000461239 BATFQ16520 125 aa4.9□□□□□ -1.63
ECHDC1-212ENST00000461239 FAM19A5Q7Z5A7 132 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-212ENST00000461239 BOD1L2Q8IYS8 172 aa4.9□□□□□ -1.63
ECHDC1-212ENST00000461239 Q8NDZ9 215 aa4.9□□□□□ -1.63
ECHDC1-212ENST00000461239 ERG28Q9UKR5 140 aa4.9□□□□□ -1.63
ECHDC1-212ENST00000461239 A6NDN8 102 aa4.89□□□□□ -1.63
ECHDC1-212ENST00000461239 PFN2P35080 140 aa4.89□□□□□ -1.63
ECHDC1-212ENST00000461239 PRR3P79522 188 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-212ENST00000461239 HINT1P49773 126 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-212ENST00000461239 BVES-AS1Q5T3Y7 98 aa4.88□□□□□ -1.63
ECHDC1-212ENST00000461239 HIGD1BQ9P298 99 aa4.88□□□□□ -1.63
ECHDC1-212ENST00000461239 NDUFA12Q9UI09 145 aa4.88□□□□□ -1.63
ECHDC1-212ENST00000461239 PSORS1C2Q9UIG4 136 aa4.88□□□□□ -1.63
ECHDC1-212ENST00000461239 C22orf24Q9Y442 160 aa4.88□□□□□ -1.63
ECHDC1-212ENST00000461239 HERC1Q15751 4861 aa4.88□□□□□ -1.63
ECHDC1-212ENST00000461239 IGKV2D-26A0A0A0MRZ7 120 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 J3QQQ9 107 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 M0QXV9 152 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 SMIM13P0DJ93 91 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 HSD52Q0P140 79 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 COX17Q14061 63 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 GTF2H5Q6ZYL4 71 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 ATOH7Q8N100 152 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 PLEKHB2Q96CS7 222 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 SND1-IT1Q9HBX3 110 aa4.87□□□□□ -1.63
ECHDC1-212ENST00000461239 TAL2Q16559 108 aa4.86□□□□□ -1.63
ECHDC1-212ENST00000461239 SFTA2Q6UW10 78 aa4.86□□□□□ -1.63
ECHDC1-212ENST00000461239 TTTY13Q9BZ97 58 aa4.86□□□□□ -1.63
ECHDC1-212ENST00000461239 TNXBP22105 4242 aa4.86□□□□□ -1.63
ECHDC1-212ENST00000461239 MYMXA0A1B0GTQ4 84 aa4.85□□□□□ -1.63
ECHDC1-212ENST00000461239 LINC00158P58513 81 aa4.85□□□□□ -1.63
ECHDC1-212ENST00000461239 HERVK_113P61574 105 aa4.85□□□□□ -1.63
ECHDC1-212ENST00000461239 VAMP3Q15836 100 aa4.85□□□□□ -1.63
ECHDC1-212ENST00000461239 TP73-AS1Q9UF72 201 aa4.85□□□□□ -1.63
ECHDC1-212ENST00000461239 TAX1BP3O14907 124 aa4.84□□□□□ -1.63
ECHDC1-212ENST00000461239 MIR7-3HGQ8N6C7 128 aa4.84□□□□□ -1.63
ECHDC1-212ENST00000461239 DAND5Q8N907 189 aa4.84□□□□□ -1.63
ECHDC1-212ENST00000461239 LINC00167Q96N53 147 aa4.84□□□□□ -1.63
ECHDC1-212ENST00000461239 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
ECHDC1-212ENST00000461239 K7ERU9 68 aa4.83□□□□□ -1.64
ECHDC1-212ENST00000461239 LGALS3P17931 250 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-212ENST00000461239 NMUP48645 174 aa4.83□□□□□ -1.64
ECHDC1-212ENST00000461239 MEIG1Q5JSS6 88 aa4.83□□□□□ -1.64
ECHDC1-212ENST00000461239 C1orf137Q5JT78 98 aa4.83□□□□□ -1.64
ECHDC1-212ENST00000461239 MRPL55Q7Z7F7 128 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-212ENST00000461239 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-212ENST00000461239 LOC107984156A0A0G2JMH3 177 aa4.82□□□□□ -1.64
ECHDC1-212ENST00000461239 IGLV7-43P04211 117 aa4.82□□□□□ -1.64
ECHDC1-212ENST00000461239 SOSTDC1Q6X4U4 206 aa4.82□□□□□ -1.64
ECHDC1-212ENST00000461239 C2orf91Q6ZV80 131 aa4.82□□□□□ -1.64
ECHDC1-212ENST00000461239 ARL17AQ8IVW1 177 aa4.82□□□□□ -1.64
ECHDC1-212ENST00000461239 IGLV1-50A0A075B6I6 118 aa4.81□□□□□ -1.64
ECHDC1-212ENST00000461239 UBE2BP63146 152 aa4.81□□□□□ -1.64
ECHDC1-212ENST00000461239 PCP2Q8IVA1 136 aa4.81□□□□□ -1.64
ECHDC1-212ENST00000461239 CEND1Q8N111 149 aa4.81□□□□□ -1.64
ECHDC1-212ENST00000461239 ZNF815PA8K554 130 aa4.8□□□□□ -1.64
ECHDC1-212ENST00000461239 MT1HL1P0DM35 61 aa4.8□□□□□ -1.64
ECHDC1-212ENST00000461239 SPINK6Q6UWN8 80 aa4.8□□□□□ -1.64
ECHDC1-212ENST00000461239 IGKV2-28A0A075B6P5 120 aa4.79□□□□□ -1.64
ECHDC1-212ENST00000461239 K7EP34 96 aa4.79□□□□□ -1.64
ECHDC1-212ENST00000461239 IGKV2D-28P01615 120 aa4.79□□□□□ -1.64
ECHDC1-212ENST00000461239 FABP2P12104 132 aa4.79□□□□□ -1.64
ECHDC1-212ENST00000461239 KRTAP13-1Q8IUC0 172 aa4.79□□□□□ -1.64
ECHDC1-212ENST00000461239 NKAPP1Q8N9T2 125 aa4.79□□□□□ -1.64
ECHDC1-212ENST00000461239 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
ECHDC1-212ENST00000461239 M0R378 163 aa4.78□□□□□ -1.64
ECHDC1-212ENST00000461239 NCR3O14931 201 aa4.78□□□□□ -1.64
ECHDC1-212ENST00000461239 TIMM17BO60830 172 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms