RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
ERCC3-205ENST00000460485 GAGE2EQ4V326 116 aa9.21□□□□□ -0.94
ERCC3-205ENST00000460485 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.94
ERCC3-205ENST00000460485 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
ERCC3-205ENST00000460485 GAGE2DQ9UEU5 116 aa9.21□□□□□ -0.94
ERCC3-205ENST00000460485 KMT2AQ03164 3969 aa9.2□□□□□ -0.94
ERCC3-205ENST00000460485 MT-ATP8P03928 68 aa9.2□□□□□ -0.94
ERCC3-205ENST00000460485 PDE6GP18545 87 aa9.2□□□□□ -0.94
ERCC3-205ENST00000460485 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
ERCC3-205ENST00000460485 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
ERCC3-205ENST00000460485 PRYO14603 147 aa9.19□□□□□ -0.94
ERCC3-205ENST00000460485 C9orf129Q5T035 196 aaKnown RBP9.19□□□□□ -0.94
ERCC3-205ENST00000460485 KCNQ1DNQ9H478 68 aa9.19□□□□□ -0.94
ERCC3-205ENST00000460485 LY6G6CO95867 125 aa9.18□□□□□ -0.94
ERCC3-205ENST00000460485 HECTD4Q9Y4D8 3996 aa9.17□□□□□ -0.94
ERCC3-205ENST00000460485 TRBV7-7A0A0K0K1E9 115 aa9.17□□□□□ -0.94
ERCC3-205ENST00000460485 PSCAO43653 123 aa9.17□□□□□ -0.94
ERCC3-205ENST00000460485 GAGE2BQ13066 116 aa9.17□□□□□ -0.94
ERCC3-205ENST00000460485 GAGE2AQ6NT46 116 aa9.17□□□□□ -0.94
ERCC3-205ENST00000460485 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
ERCC3-205ENST00000460485 SLPIP03973 132 aa9.15□□□□□ -0.94
ERCC3-205ENST00000460485 CCKP06307 115 aa9.15□□□□□ -0.94
ERCC3-205ENST00000460485 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
ERCC3-205ENST00000460485 C14orf132Q9NPU4 83 aa9.15□□□□□ -0.94
ERCC3-205ENST00000460485 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
ERCC3-205ENST00000460485 DHRS4-AS1Q9P1J3 65 aa9.14□□□□□ -0.95
ERCC3-205ENST00000460485 A0A1B0GV72 72 aa9.13□□□□□ -0.95
ERCC3-205ENST00000460485 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
ERCC3-205ENST00000460485 Q6ZQY7 126 aa9.13□□□□□ -0.95
ERCC3-205ENST00000460485 C7orf33Q8WU49 177 aa9.13□□□□□ -0.95
ERCC3-205ENST00000460485 ATP5EP2Q5VTU8 51 aa9.12□□□□□ -0.95
ERCC3-205ENST00000460485 NBDYA0A0U1RRE5 68 aa9.11□□□□□ -0.95
ERCC3-205ENST00000460485 C16orf90A8MZG2 172 aa9.11□□□□□ -0.95
ERCC3-205ENST00000460485 LAMTOR3Q9UHA4 124 aa9.11□□□□□ -0.95
ERCC3-205ENST00000460485 SPRR1AP35321 89 aa9.1□□□□□ -0.95
ERCC3-205ENST00000460485 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
ERCC3-205ENST00000460485 DSCR8Q96T75 97 aa9.1□□□□□ -0.95
ERCC3-205ENST00000460485 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
ERCC3-205ENST00000460485 IGLV1-50A0A075B6I6 118 aa9.09□□□□□ -0.95
ERCC3-205ENST00000460485 Q6JHZ5 121 aa9.09□□□□□ -0.95
ERCC3-205ENST00000460485 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
ERCC3-205ENST00000460485 DNAH10Q8IVF4 4471 aa9.08□□□□□ -0.96
ERCC3-205ENST00000460485 Q6ZRX8 168 aa9.08□□□□□ -0.96
ERCC3-205ENST00000460485 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
ERCC3-205ENST00000460485 ETDCA0A1B0GVM5 59 aa9.07□□□□□ -0.96
ERCC3-205ENST00000460485 Q6ZQT0 140 aa9.06□□□□□ -0.96
ERCC3-205ENST00000460485 KRTAP4-16G5E9R7 235 aaPredicted RBP9.05□□□□□ -0.96
ERCC3-205ENST00000460485 SMCR5Q8TEV8 140 aa9.05□□□□□ -0.96
ERCC3-205ENST00000460485 A0A1B0GW54 56 aa9.04□□□□□ -0.96
ERCC3-205ENST00000460485 B5MCH6 92 aa9.04□□□□□ -0.96
ERCC3-205ENST00000460485 NDUFV3P56181 108 aaKnown RBP9.04□□□□□ -0.96
ERCC3-205ENST00000460485 UBL5Q9BZL1 73 aa9.04□□□□□ -0.96
ERCC3-205ENST00000460485 TRBV7-4A0A0J9YYF1 115 aa9.03□□□□□ -0.96
ERCC3-205ENST00000460485 LINC00846Q9NV44 126 aa9.03□□□□□ -0.96
ERCC3-205ENST00000460485 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
ERCC3-205ENST00000460485 FAM19A5Q7Z5A7 132 aaPredicted RBP9.02□□□□□ -0.97
ERCC3-205ENST00000460485 C9orf163Q8N9P6 203 aa9.02□□□□□ -0.97
ERCC3-205ENST00000460485 ANAPC13Q9BS18 74 aa9.01□□□□□ -0.97
ERCC3-205ENST00000460485 A0A096LNI7 61 aa9□□□□□ -0.97
ERCC3-205ENST00000460485 LRCOL1A6NCL2 159 aa9□□□□□ -0.97
ERCC3-205ENST00000460485 Q6ZRN7 208 aaPredicted RBP9□□□□□ -0.97
ERCC3-205ENST00000460485 IGLV5-48A0A075B6I7 105 aa8.99□□□□□ -0.97
ERCC3-205ENST00000460485 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
ERCC3-205ENST00000460485 LINC00336Q6ZUF6 198 aa8.98□□□□□ -0.97
ERCC3-205ENST00000460485 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
ERCC3-205ENST00000460485 RPL37AP8A6NKH3 93 aa8.97□□□□□ -0.97
ERCC3-205ENST00000460485 H0Y9J4 135 aa8.97□□□□□ -0.97
ERCC3-205ENST00000460485 VPS13DQ5THJ4 4388 aa8.96□□□□□ -0.97
ERCC3-205ENST00000460485 ABCA13Q86UQ4 5058 aa8.96□□□□□ -0.97
ERCC3-205ENST00000460485 PKHD1P08F94 4074 aa8.96□□□□□ -0.98
ERCC3-205ENST00000460485 A0A1B0GVY2 172 aa8.94□□□□□ -0.98
ERCC3-205ENST00000460485 UBE2BP63146 152 aa8.94□□□□□ -0.98
ERCC3-205ENST00000460485 Q9BRP9 147 aa8.94□□□□□ -0.98
ERCC3-205ENST00000460485 KRTAP4-5Q9BYR2 181 aa8.94□□□□□ -0.98
ERCC3-205ENST00000460485 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.93□□□□□ -0.98
ERCC3-205ENST00000460485 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
ERCC3-205ENST00000460485 FAM236AA0A1B0GUQ0 79 aa8.93□□□□□ -0.98
ERCC3-205ENST00000460485 FAM236BA0A1B0GV22 79 aa8.93□□□□□ -0.98
ERCC3-205ENST00000460485 ATOX1O00244 68 aa8.93□□□□□ -0.98
ERCC3-205ENST00000460485 CXCL6P80162 114 aa8.93□□□□□ -0.98
ERCC3-205ENST00000460485 Q6ZR54 194 aa8.93□□□□□ -0.98
ERCC3-205ENST00000460485 LINC01547P58512 204 aaPredicted RBP8.92□□□□□ -0.98
ERCC3-205ENST00000460485 HIST1H4AP62805 103 aaKnown RBP8.92□□□□□ -0.98
ERCC3-205ENST00000460485 Q8N377 158 aa8.92□□□□□ -0.98
ERCC3-205ENST00000460485 A0A087WTM6 91 aa8.9□□□□□ -0.98
ERCC3-205ENST00000460485 EPM2AB3EWF7 344 aa8.9□□□□□ -0.98
ERCC3-205ENST00000460485 F8WEM9 126 aa8.9□□□□□ -0.98
ERCC3-205ENST00000460485 FUSP35637 526 aaKnown RBP eCLIP8.9□□□□□ -0.98
ERCC3-205ENST00000460485 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
ERCC3-205ENST00000460485 TNP2Q05952 138 aa8.89□□□□□ -0.99
ERCC3-205ENST00000460485 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
ERCC3-205ENST00000460485 BCE1O60756 84 aa8.88□□□□□ -0.99
ERCC3-205ENST00000460485 Q6ZVQ6 151 aa8.88□□□□□ -0.99
ERCC3-205ENST00000460485 FAM19A1Q7Z5A9 133 aa8.88□□□□□ -0.99
ERCC3-205ENST00000460485 FAT2Q9NYQ8 4349 aa8.87□□□□□ -0.99
ERCC3-205ENST00000460485 IGKV3D-7A0A0C4DH55 119 aa8.87□□□□□ -0.99
ERCC3-205ENST00000460485 SPACA4Q8TDM5 124 aa8.86□□□□□ -0.99
ERCC3-205ENST00000460485 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
ERCC3-205ENST00000460485 IGLV8-61A0A075B6I0 122 aa8.85□□□□□ -0.99
ERCC3-205ENST00000460485 C1orf134Q5TEV5 83 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms