RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CXCL6P80162 114 aa9.15□□□□□ -0.94
TOP3B-213ENST00000457179 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.95
TOP3B-213ENST00000457179 CHCHD10Q8WYQ3 142 aaPredicted RBP9.14□□□□□ -0.95
TOP3B-213ENST00000457179 REG3AQ06141 175 aa9.14□□□□□ -0.95
TOP3B-213ENST00000457179 C6orf223Q8N319 242 aa9.14□□□□□ -0.95
TOP3B-213ENST00000457179 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.951e-7■□□□□ 9.3
TOP3B-213ENST00000457179 MUC7Q8TAX7 377 aa9.13□□□□□ -0.95
TOP3B-213ENST00000457179 CSMD3Q7Z407 3707 aa9.13□□□□□ -0.95
TOP3B-213ENST00000457179 ESRGQ1W209 222 aa9.13□□□□□ -0.95
TOP3B-213ENST00000457179 LINC00612Q8N6U2 182 aa9.13□□□□□ -0.95
TOP3B-213ENST00000457179 PRYO14603 147 aa9.12□□□□□ -0.95
TOP3B-213ENST00000457179 KPRPQ5T749 579 aaPredicted RBP9.12□□□□□ -0.95
TOP3B-213ENST00000457179 Q8IZM0 81 aa9.12□□□□□ -0.95
TOP3B-213ENST00000457179 WFDC10BQ8IUB3 73 aa9.11□□□□□ -0.95
TOP3B-213ENST00000457179 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
TOP3B-213ENST00000457179 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
TOP3B-213ENST00000457179 A0A1B0GUV1 79 aa9.1□□□□□ -0.95
TOP3B-213ENST00000457179 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.09□□□□□ -0.95
TOP3B-213ENST00000457179 C11orf45Q8TAV5 145 aa9.08□□□□□ -0.96
TOP3B-213ENST00000457179 DEFB131BA0A096LNP1 70 aa9.08□□□□□ -0.96
TOP3B-213ENST00000457179 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
TOP3B-213ENST00000457179 CD164L2Q6UWJ8 174 aa9.07□□□□□ -0.96
TOP3B-213ENST00000457179 UNQ6190/PRO20217Q6UXQ8 127 aa9.07□□□□□ -0.96
TOP3B-213ENST00000457179 PDE6GP18545 87 aa9.06□□□□□ -0.96
TOP3B-213ENST00000457179 HIGD2BQ4VC39 106 aa9.06□□□□□ -0.96
TOP3B-213ENST00000457179 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
TOP3B-213ENST00000457179 MDFIQ99750 246 aa9.06□□□□□ -0.96
TOP3B-213ENST00000457179 PSPHP1O15172 72 aa9.05□□□□□ -0.96
TOP3B-213ENST00000457179 SPAG11BQ08648 103 aa9.04□□□□□ -0.96
TOP3B-213ENST00000457179 PMAIP1Q13794 54 aa9.04□□□□□ -0.96
TOP3B-213ENST00000457179 TGP01266 2768 aa9.04□□□□□ -0.96
TOP3B-213ENST00000457179 C3orf84H3BNL1 204 aa9.03□□□□□ -0.96
TOP3B-213ENST00000457179 LELP1Q5T871 98 aa9.03□□□□□ -0.96
TOP3B-213ENST00000457179 XAGE1AQ9HD64 81 aa9.03□□□□□ -0.96
TOP3B-213ENST00000457179 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
TOP3B-213ENST00000457179 COX17Q14061 63 aa9.02□□□□□ -0.97
TOP3B-213ENST00000457179 PRR4Q16378 134 aa9.02□□□□□ -0.97
TOP3B-213ENST00000457179 IGKV4-1P06312 121 aa9.01□□□□□ -0.97
TOP3B-213ENST00000457179 OCR1Q9BZK8 76 aa9.01□□□□□ -0.97
TOP3B-213ENST00000457179 IGKV2D-24A0A075B6R9 120 aa9.01□□□□□ -0.97
TOP3B-213ENST00000457179 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
TOP3B-213ENST00000457179 DIRC1Q969H9 104 aa9□□□□□ -0.97
TOP3B-213ENST00000457179 K7EIL1 84 aa8.99□□□□□ -0.97
TOP3B-213ENST00000457179 ERC2-IT1O76042 136 aa8.99□□□□□ -0.97
TOP3B-213ENST00000457179 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
TOP3B-213ENST00000457179 Q6ZRP5 223 aa8.98□□□□□ -0.97
TOP3B-213ENST00000457179 COX7BP24311 80 aa8.97□□□□□ -0.97
TOP3B-213ENST00000457179 SMIM29Q86T20 159 aa8.97□□□□□ -0.97
TOP3B-213ENST00000457179 PRR15Q8IV56 129 aa8.97□□□□□ -0.97
TOP3B-213ENST00000457179 LYSTQ99698 3801 aa8.97□□□□□ -0.97
TOP3B-213ENST00000457179 ZNF73O43830 326 aaPredicted RBP8.96□□□□□ -0.98
TOP3B-213ENST00000457179 C1orf64Q8NEQ6 169 aa8.96□□□□□ -0.98
TOP3B-213ENST00000457179 CMYA5Q8N3K9 4069 aa8.96□□□□□ -0.98
TOP3B-213ENST00000457179 hDV103S1A0JD37 113 aa8.96□□□□□ -0.98
TOP3B-213ENST00000457179 DEFB105AQ8NG35 78 aa8.93□□□□□ -0.98
TOP3B-213ENST00000457179 C6orf48Q9UBA6 75 aa8.93□□□□□ -0.98
TOP3B-213ENST00000457179 CAMK2N2Q96S95 79 aa8.92□□□□□ -0.98
TOP3B-213ENST00000457179 A8MU10 97 aa8.92□□□□□ -0.98
TOP3B-213ENST00000457179 H3BQ85 93 aa8.91□□□□□ -0.98
TOP3B-213ENST00000457179 TRAV22A0A0B4J277 110 aa8.9□□□□□ -0.98
TOP3B-213ENST00000457179 Q6ZRU5 148 aa8.9□□□□□ -0.98
TOP3B-213ENST00000457179 PRR34Q9NV39 138 aa8.9□□□□□ -0.98
TOP3B-213ENST00000457179 ELOF1P60002 83 aaKnown RBP8.89□□□□□ -0.99
TOP3B-213ENST00000457179 A8MUN3 132 aa8.88□□□□□ -0.99
TOP3B-213ENST00000457179 Q1T7F1 81 aa8.88□□□□□ -0.99
TOP3B-213ENST00000457179 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
TOP3B-213ENST00000457179 CASC10Q5T4H9 136 aa8.86□□□□□ -0.99
TOP3B-213ENST00000457179 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
TOP3B-213ENST00000457179 HUWE1Q7Z6Z7 4374 aaKnown RBP8.84□□□□□ -0.99
TOP3B-213ENST00000457179 DNHD1Q96M86 4753 aa8.83□□□□□ -1
TOP3B-213ENST00000457179 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
TOP3B-213ENST00000457179 ST20-AS1Q8NBB2 130 aa8.82□□□□□ -1
TOP3B-213ENST00000457179 C15orf56Q8N910 161 aa8.81□□□□□ -1
TOP3B-213ENST00000457179 SPTSSBQ8NFR3 76 aa8.81□□□□□ -1
TOP3B-213ENST00000457179 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.81□□□□□ -1
TOP3B-213ENST00000457179 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
TOP3B-213ENST00000457179 CD164Q04900 197 aa8.8□□□□□ -1
TOP3B-213ENST00000457179 SYCNQ0VAF6 134 aa8.79□□□□□ -1
TOP3B-213ENST00000457179 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
TOP3B-213ENST00000457179 H3BNG1 76 aa8.79□□□□□ -1
TOP3B-213ENST00000457179 PSCAO43653 123 aa8.79□□□□□ -1
TOP3B-213ENST00000457179 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
TOP3B-213ENST00000457179 ETDCA0A1B0GVM5 59 aa8.79□□□□□ -1
TOP3B-213ENST00000457179 DEFB116Q30KQ4 102 aa8.79□□□□□ -1
TOP3B-213ENST00000457179 VPREB1P12018 145 aa8.78□□□□□ -1
TOP3B-213ENST00000457179 CHKB-CPT1BH3BT56 60 aa8.78□□□□□ -1
TOP3B-213ENST00000457179 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
TOP3B-213ENST00000457179 K7EQZ3 153 aa8.77□□□□□ -1
TOP3B-213ENST00000457179 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1
TOP3B-213ENST00000457179 GVQW2A0A096LPI5 108 aaPredicted RBP8.76□□□□□ -1.01
TOP3B-213ENST00000457179 M0R378 163 aa8.76□□□□□ -1.01
TOP3B-213ENST00000457179 IGKV2-24A0A0C4DH68 120 aa8.75□□□□□ -1.01
TOP3B-213ENST00000457179 ZCCHC13Q8WW36 166 aaKnown RBP8.75□□□□□ -1.01
TOP3B-213ENST00000457179 DNAH10Q8IVF4 4471 aa8.75□□□□□ -1.01
TOP3B-213ENST00000457179 Q8N377 158 aa8.75□□□□□ -1.01
TOP3B-213ENST00000457179 RPL37AP8A6NKH3 93 aa8.74□□□□□ -1.01
TOP3B-213ENST00000457179 Q5VV11 94 aa8.74□□□□□ -1.01
TOP3B-213ENST00000457179 A0A1W2PNM2 257 aa8.74□□□□□ -1.01
TOP3B-213ENST00000457179 LCE6AA0A183 80 aa8.73□□□□□ -1.01
TOP3B-213ENST00000457179 FAM168BA1KXE4 195 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms