RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RMI2Q96E14 147 aa8.19□□□□□ -1.1
LINC00959-201ENST00000456581 DIRC1Q969H9 104 aa8.18□□□□□ -1.1
LINC00959-201ENST00000456581 DNAH9Q9NYC9 4486 aa8.18□□□□□ -1.1
LINC00959-201ENST00000456581 Q6ZRU5 148 aa8.18□□□□□ -1.1
LINC00959-201ENST00000456581 MUC7Q8TAX7 377 aa8.18□□□□□ -1.1
LINC00959-201ENST00000456581 CAMK2N2Q96S95 79 aa8.18□□□□□ -1.1
LINC00959-201ENST00000456581 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
LINC00959-201ENST00000456581 KRTAP26-1Q6PEX3 210 aa8.17□□□□□ -1.1
LINC00959-201ENST00000456581 TM2D3Q9BRN9 247 aa8.17□□□□□ -1.1
LINC00959-201ENST00000456581 LOC110117498A0A087WWA1 95 aa8.16□□□□□ -1.1
LINC00959-201ENST00000456581 ATP5EP2Q5VTU8 51 aa8.16□□□□□ -1.1
LINC00959-201ENST00000456581 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.1
LINC00959-201ENST00000456581 COX7BP24311 80 aa8.15□□□□□ -1.1
LINC00959-201ENST00000456581 DNAH10Q8IVF4 4471 aa8.15□□□□□ -1.11
LINC00959-201ENST00000456581 H7BZZ5 65 aa8.15□□□□□ -1.11
LINC00959-201ENST00000456581 VPREB1P12018 145 aa8.15□□□□□ -1.11
LINC00959-201ENST00000456581 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
LINC00959-201ENST00000456581 Q6ZRP5 223 aa8.13□□□□□ -1.11
LINC00959-201ENST00000456581 C15orf56Q8N910 161 aa8.13□□□□□ -1.11
LINC00959-201ENST00000456581 DEFB105AQ8NG35 78 aa8.13□□□□□ -1.11
LINC00959-201ENST00000456581 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
LINC00959-201ENST00000456581 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
LINC00959-201ENST00000456581 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
LINC00959-201ENST00000456581 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
LINC00959-201ENST00000456581 LINC01556Q5JQF7 62 aa8.12□□□□□ -1.11
LINC00959-201ENST00000456581 CASC10Q5T4H9 136 aa8.11□□□□□ -1.11
LINC00959-201ENST00000456581 DNHD1Q96M86 4753 aa8.11□□□□□ -1.11
LINC00959-201ENST00000456581 TRBV7-4A0A0J9YYF1 115 aa8.11□□□□□ -1.11
LINC00959-201ENST00000456581 C3orf84H3BNL1 204 aa8.11□□□□□ -1.11
LINC00959-201ENST00000456581 GVQW2A0A096LPI5 108 aaPredicted RBP8.11□□□□□ -1.11
LINC00959-201ENST00000456581 BPY2O14599 106 aa8.11□□□□□ -1.11
LINC00959-201ENST00000456581 FAM236DA0A1B0GTK5 79 aa8.1□□□□□ -1.11
LINC00959-201ENST00000456581 FAM236CP0DP71 79 aa8.1□□□□□ -1.11
LINC00959-201ENST00000456581 PRKDCP78527 4128 aaKnown RBP8.1□□□□□ -1.11
LINC00959-201ENST00000456581 F8WEM9 126 aa8.09□□□□□ -1.11
LINC00959-201ENST00000456581 SERTAD4-AS1Q5TG53 156 aa8.09□□□□□ -1.11
LINC00959-201ENST00000456581 LINC00474Q9P2X8 69 aa8.09□□□□□ -1.11
LINC00959-201ENST00000456581 DNAH1Q9P2D7 4330 aa8.09□□□□□ -1.11
LINC00959-201ENST00000456581 RPL37AP8A6NKH3 93 aa8.08□□□□□ -1.12
LINC00959-201ENST00000456581 LINC00528Q8N1L1 170 aa8.08□□□□□ -1.12
LINC00959-201ENST00000456581 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
LINC00959-201ENST00000456581 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
LINC00959-201ENST00000456581 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
LINC00959-201ENST00000456581 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
LINC00959-201ENST00000456581 MEGF8Q7Z7M0 2845 aa8.07□□□□□ -1.12
LINC00959-201ENST00000456581 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
LINC00959-201ENST00000456581 M0R378 163 aa8.06□□□□□ -1.12
LINC00959-201ENST00000456581 A0A0G2JQZ4 141 aa8.06□□□□□ -1.12
LINC00959-201ENST00000456581 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
LINC00959-201ENST00000456581 CXCL6P80162 114 aa8.05□□□□□ -1.12
LINC00959-201ENST00000456581 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
LINC00959-201ENST00000456581 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
LINC00959-201ENST00000456581 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
LINC00959-201ENST00000456581 C7orf33Q8WU49 177 aa8.02□□□□□ -1.12
LINC00959-201ENST00000456581 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
LINC00959-201ENST00000456581 ST20-AS1Q8NBB2 130 aa8.02□□□□□ -1.13
LINC00959-201ENST00000456581 KRTAP1-5Q9BYS1 174 aa8.02□□□□□ -1.13
LINC00959-201ENST00000456581 TRBV7-6A0A0J9YX20 115 aa8.02□□□□□ -1.13
LINC00959-201ENST00000456581 PDE6GP18545 87 aa8.02□□□□□ -1.13
LINC00959-201ENST00000456581 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
LINC00959-201ENST00000456581 TGP01266 2768 aa8.01□□□□□ -1.13
LINC00959-201ENST00000456581 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
LINC00959-201ENST00000456581 Q8N377 158 aa8.01□□□□□ -1.13
LINC00959-201ENST00000456581 BCE1O60756 84 aa8.01□□□□□ -1.13
LINC00959-201ENST00000456581 NREPQ16612 68 aa8.01□□□□□ -1.13
LINC00959-201ENST00000456581 IGKV4-1P06312 121 aa8□□□□□ -1.13
LINC00959-201ENST00000456581 NKAPP1Q8N9T2 125 aa8□□□□□ -1.13
LINC00959-201ENST00000456581 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
LINC00959-201ENST00000456581 PRO0628Q9UI54 55 aa7.99□□□□□ -1.13
LINC00959-201ENST00000456581 Q9BRP9 147 aa7.98□□□□□ -1.13
LINC00959-201ENST00000456581 KRTAP7-1Q8IUC3 87 aa7.97□□□□□ -1.13
LINC00959-201ENST00000456581 ERC2-IT1O76042 136 aa7.97□□□□□ -1.13
LINC00959-201ENST00000456581 HIGD2AQ9BW72 106 aa7.97□□□□□ -1.13
LINC00959-201ENST00000456581 TMEM254Q8TBM7 123 aa7.96□□□□□ -1.13
LINC00959-201ENST00000456581 LRCOL1A6NCL2 159 aa7.96□□□□□ -1.14
LINC00959-201ENST00000456581 B9D2Q9BPU9 175 aa7.95□□□□□ -1.14
LINC00959-201ENST00000456581 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
LINC00959-201ENST00000456581 FAM30AQ9NZY2 134 aa7.95□□□□□ -1.14
LINC00959-201ENST00000456581 DYNC2H1Q8NCM8 4307 aaKnown RBP7.95□□□□□ -1.14
LINC00959-201ENST00000456581 A0A1W2PNM2 257 aa7.94□□□□□ -1.14
LINC00959-201ENST00000456581 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
LINC00959-201ENST00000456581 H3BQ85 93 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 APLNQ9ULZ1 77 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 F8WDY8 70 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 UBE2DNLQ8IWF7 75 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 SMIM29Q86T20 159 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 OCR1Q9BZK8 76 aa7.93□□□□□ -1.14
LINC00959-201ENST00000456581 Q6ZRX8 168 aa7.92□□□□□ -1.14
LINC00959-201ENST00000456581 PKIGQ9Y2B9 76 aa7.91□□□□□ -1.14
LINC00959-201ENST00000456581 FBN3Q75N90 2809 aa7.91□□□□□ -1.14
LINC00959-201ENST00000456581 KMT2AQ03164 3969 aa7.9□□□□□ -1.15
LINC00959-201ENST00000456581 C1orf137Q5JT78 98 aa7.9□□□□□ -1.15
LINC00959-201ENST00000456581 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
LINC00959-201ENST00000456581 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
LINC00959-201ENST00000456581 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
LINC00959-201ENST00000456581 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
LINC00959-201ENST00000456581 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.89□□□□□ -1.15
LINC00959-201ENST00000456581 PRR4Q16378 134 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms