RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 C7orf33Q8WU49 177 aa10.4□□□□□ -0.74
AP000253.1-201ENST00000449339 PLA2G2DQ9UNK4 145 aa10.4□□□□□ -0.74
AP000253.1-201ENST00000449339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.39□□□□□ -0.75
AP000253.1-201ENST00000449339 LINC00528Q8N1L1 170 aa10.39□□□□□ -0.75
AP000253.1-201ENST00000449339 KCNQ1DNQ9H478 68 aa10.39□□□□□ -0.75
AP000253.1-201ENST00000449339 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
AP000253.1-201ENST00000449339 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
AP000253.1-201ENST00000449339 FAM168BA1KXE4 195 aa10.38□□□□□ -0.75
AP000253.1-201ENST00000449339 H3BQ85 93 aa10.38□□□□□ -0.75
AP000253.1-201ENST00000449339 LINC00846Q9NV44 126 aa10.38□□□□□ -0.75
AP000253.1-201ENST00000449339 RBM3P98179 157 aaKnown RBP10.37□□□□□ -0.75
AP000253.1-201ENST00000449339 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
AP000253.1-201ENST00000449339 IMUPQ9GZP8 106 aa10.37□□□□□ -0.75
AP000253.1-201ENST00000449339 TGP01266 2768 aa10.37□□□□□ -0.75
AP000253.1-201ENST00000449339 LOC107984640A0A0U1RRK4 108 aa10.36□□□□□ -0.75
AP000253.1-201ENST00000449339 M0R2N4 97 aa10.35□□□□□ -0.75
AP000253.1-201ENST00000449339 GHRHP01286 108 aa10.35□□□□□ -0.75
AP000253.1-201ENST00000449339 IGLV5-37A0A075B6J1 123 aa10.35□□□□□ -0.75
AP000253.1-201ENST00000449339 KRTAP7-1Q8IUC3 87 aa10.34□□□□□ -0.75
AP000253.1-201ENST00000449339 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.33□□□□□ -0.76
AP000253.1-201ENST00000449339 RPL37AP8A6NKH3 93 aa10.33□□□□□ -0.76
AP000253.1-201ENST00000449339 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
AP000253.1-201ENST00000449339 Q6ZQT0 140 aa10.32□□□□□ -0.76
AP000253.1-201ENST00000449339 LOC110117498A0A087WWA1 95 aa10.31□□□□□ -0.76
AP000253.1-201ENST00000449339 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
AP000253.1-201ENST00000449339 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
AP000253.1-201ENST00000449339 DSCR8Q96T75 97 aa10.31□□□□□ -0.76
AP000253.1-201ENST00000449339 Q6ZRN7 208 aaPredicted RBP10.3□□□□□ -0.76
AP000253.1-201ENST00000449339 MRPL55Q7Z7F7 128 aaKnown RBP10.3□□□□□ -0.76
AP000253.1-201ENST00000449339 PRYO14603 147 aa10.29□□□□□ -0.76
AP000253.1-201ENST00000449339 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
AP000253.1-201ENST00000449339 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
AP000253.1-201ENST00000449339 Q6JHZ5 121 aa10.28□□□□□ -0.76
AP000253.1-201ENST00000449339 SPRR1AP35321 89 aa10.27□□□□□ -0.76
AP000253.1-201ENST00000449339 C5orf47Q569G3 176 aa10.27□□□□□ -0.76
AP000253.1-201ENST00000449339 Q6ZRX8 168 aa10.27□□□□□ -0.76
AP000253.1-201ENST00000449339 C3orf22Q8N5N4 141 aa10.27□□□□□ -0.76
AP000253.1-201ENST00000449339 A0A096LNI7 61 aa10.27□□□□□ -0.77
AP000253.1-201ENST00000449339 C16orf90A8MZG2 172 aa10.27□□□□□ -0.77
AP000253.1-201ENST00000449339 PDE6GP18545 87 aa10.27□□□□□ -0.77
AP000253.1-201ENST00000449339 C14orf177Q52M58 125 aa10.27□□□□□ -0.77
AP000253.1-201ENST00000449339 KMT2AQ03164 3969 aa10.26□□□□□ -0.77
AP000253.1-201ENST00000449339 IGKV2-24A0A0C4DH68 120 aa10.26□□□□□ -0.77
AP000253.1-201ENST00000449339 FAM236AA0A1B0GUQ0 79 aa10.26□□□□□ -0.77
AP000253.1-201ENST00000449339 FAM236BA0A1B0GV22 79 aa10.26□□□□□ -0.77
AP000253.1-201ENST00000449339 UQCRQO14949 82 aa10.26□□□□□ -0.77
AP000253.1-201ENST00000449339 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
AP000253.1-201ENST00000449339 ETDCA0A1B0GVM5 59 aa10.26□□□□□ -0.77
AP000253.1-201ENST00000449339 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
AP000253.1-201ENST00000449339 TRBV7-4A0A0J9YYF1 115 aa10.25□□□□□ -0.77
AP000253.1-201ENST00000449339 Q9BRP9 147 aa10.24□□□□□ -0.77
AP000253.1-201ENST00000449339 C9orf153Q5TBE3 101 aa10.23□□□□□ -0.77
AP000253.1-201ENST00000449339 UBL5Q9BZL1 73 aa10.23□□□□□ -0.77
AP000253.1-201ENST00000449339 RPS28P62857 69 aaKnown RBP10.22□□□□□ -0.77
AP000253.1-201ENST00000449339 DEFB105AQ8NG35 78 aa10.22□□□□□ -0.77
AP000253.1-201ENST00000449339 J3KT08 172 aa10.21□□□□□ -0.77
AP000253.1-201ENST00000449339 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
AP000253.1-201ENST00000449339 A0A1W2PNN7 141 aa10.21□□□□□ -0.78
AP000253.1-201ENST00000449339 REG3GQ6UW15 175 aa10.2□□□□□ -0.78
AP000253.1-201ENST00000449339 Q6ZR54 194 aa10.2□□□□□ -0.78
AP000253.1-201ENST00000449339 Q8N377 158 aa10.2□□□□□ -0.78
AP000253.1-201ENST00000449339 DNAH2Q9P225 4427 aa10.2□□□□□ -0.78
AP000253.1-201ENST00000449339 FUSP35637 526 aaKnown RBP eCLIP10.19□□□□□ -0.78
AP000253.1-201ENST00000449339 LINC01547P58512 204 aaPredicted RBP10.19□□□□□ -0.78
AP000253.1-201ENST00000449339 ATP5EP2Q5VTU8 51 aa10.19□□□□□ -0.78
AP000253.1-201ENST00000449339 LY6G6CO95867 125 aa10.18□□□□□ -0.78
AP000253.1-201ENST00000449339 C9orf163Q8N9P6 203 aa10.18□□□□□ -0.78
AP000253.1-201ENST00000449339 CRYGAP11844 174 aa10.17□□□□□ -0.78
AP000253.1-201ENST00000449339 COX7CP15954 63 aa10.17□□□□□ -0.78
AP000253.1-201ENST00000449339 UBE2BP63146 152 aa10.17□□□□□ -0.78
AP000253.1-201ENST00000449339 A0A087WTM6 91 aa10.16□□□□□ -0.78
AP000253.1-201ENST00000449339 A0A087WVE0 104 aa10.16□□□□□ -0.78
AP000253.1-201ENST00000449339 WWC2-AS2Q96NR7 200 aa10.16□□□□□ -0.78
AP000253.1-201ENST00000449339 HIST1H4AP62805 103 aaKnown RBP10.15□□□□□ -0.78
AP000253.1-201ENST00000449339 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.78
AP000253.1-201ENST00000449339 PKIGQ9Y2B9 76 aa10.15□□□□□ -0.78
AP000253.1-201ENST00000449339 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
AP000253.1-201ENST00000449339 Q6ZVQ6 151 aa10.15□□□□□ -0.78
AP000253.1-201ENST00000449339 IGLV5-48A0A075B6I7 105 aa10.14□□□□□ -0.79
AP000253.1-201ENST00000449339 PANO1I0J062 215 aa10.13□□□□□ -0.79
AP000253.1-201ENST00000449339 HECTD4Q9Y4D8 3996 aa10.12□□□□□ -0.79
AP000253.1-201ENST00000449339 LINC00476Q8WZB0 136 aa10.11□□□□□ -0.79
AP000253.1-201ENST00000449339 ATOX1O00244 68 aa10.11□□□□□ -0.79
AP000253.1-201ENST00000449339 HAMPP81172 84 aa10.11□□□□□ -0.79
AP000253.1-201ENST00000449339 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
AP000253.1-201ENST00000449339 C1orf134Q5TEV5 83 aa10.1□□□□□ -0.79
AP000253.1-201ENST00000449339 FAM19A1Q7Z5A9 133 aa10.1□□□□□ -0.79
AP000253.1-201ENST00000449339 PRLHP81277 87 aa10.1□□□□□ -0.79
AP000253.1-201ENST00000449339 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
AP000253.1-201ENST00000449339 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
AP000253.1-201ENST00000449339 DNAH17Q9UFH2 4485 aa10.08□□□□□ -0.8
AP000253.1-201ENST00000449339 TNP2Q05952 138 aa10.08□□□□□ -0.8
AP000253.1-201ENST00000449339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
AP000253.1-201ENST00000449339 TMEM258P61165 79 aa10.06□□□□□ -0.8
AP000253.1-201ENST00000449339 CXCL6P80162 114 aa10.06□□□□□ -0.8
AP000253.1-201ENST00000449339 RTL8CO15255 209 aa10.06□□□□□ -0.8
AP000253.1-201ENST00000449339 DPH3Q96FX2 82 aa10.06□□□□□ -0.8
AP000253.1-201ENST00000449339 DNAH6Q9C0G6 4158 aa10.06□□□□□ -0.8
AP000253.1-201ENST00000449339 HIGD2AQ9BW72 106 aa10.05□□□□□ -0.8
AP000253.1-201ENST00000449339 ALMS1Q8TCU4 4167 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms