RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 WIPF1O43516 503 aa8.92□□□□□ -0.98
POLR1B-209ENST00000448770 DNAH1Q9P2D7 4330 aa8.91□□□□□ -0.98
POLR1B-209ENST00000448770 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
POLR1B-209ENST00000448770 FLNBO75369 2602 aaKnown RBP8.91□□□□□ -0.98
POLR1B-209ENST00000448770 EPM2AB3EWF7 344 aa8.91□□□□□ -0.98
POLR1B-209ENST00000448770 C5orf47Q569G3 176 aa8.91□□□□□ -0.98
POLR1B-209ENST00000448770 BPY2O14599 106 aa8.9□□□□□ -0.98
POLR1B-209ENST00000448770 IGKV2D-24A0A075B6R9 120 aa8.9□□□□□ -0.99
POLR1B-209ENST00000448770 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.99
POLR1B-209ENST00000448770 F8WEM9 126 aa8.89□□□□□ -0.99
POLR1B-209ENST00000448770 IGKV4-1P06312 121 aa8.89□□□□□ -0.99
POLR1B-209ENST00000448770 H3BNG1 76 aa8.89□□□□□ -0.99
POLR1B-209ENST00000448770 C3orf84H3BNL1 204 aa8.89□□□□□ -0.99
POLR1B-209ENST00000448770 Q8N377 158 aa8.89□□□□□ -0.99
POLR1B-209ENST00000448770 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
POLR1B-209ENST00000448770 C1orf43Q9BWL3 253 aa8.89□□□□□ -0.99
POLR1B-209ENST00000448770 DEFB105AQ8NG35 78 aa8.88□□□□□ -0.99
POLR1B-209ENST00000448770 FAM168BA1KXE4 195 aa8.87□□□□□ -0.99
POLR1B-209ENST00000448770 SYCNQ0VAF6 134 aa8.87□□□□□ -0.99
POLR1B-209ENST00000448770 NREPQ16612 68 aa8.87□□□□□ -0.99
POLR1B-209ENST00000448770 CASC10Q5T4H9 136 aa8.87□□□□□ -0.99
POLR1B-209ENST00000448770 F8P00451 2351 aa8.86□□□□□ -0.99
POLR1B-209ENST00000448770 KCNQ1DNQ9H478 68 aa8.86□□□□□ -0.99
POLR1B-209ENST00000448770 BAHCC1Q9P281 2608 aa8.86□□□□□ -0.99
POLR1B-209ENST00000448770 KRTAP7-1Q8IUC3 87 aa8.86□□□□□ -0.99
POLR1B-209ENST00000448770 LINC01556Q5JQF7 62 aa8.85□□□□□ -0.99
POLR1B-209ENST00000448770 RPL37AP8A6NKH3 93 aa8.85□□□□□ -0.99
POLR1B-209ENST00000448770 Q9BRP9 147 aa8.85□□□□□ -0.99
POLR1B-209ENST00000448770 SERP1Q9Y6X1 66 aa8.83□□□□□ -1
POLR1B-209ENST00000448770 KRTAP4-16G5E9R7 235 aaPredicted RBP8.82□□□□□ -1
POLR1B-209ENST00000448770 ST20-AS1Q8NBB2 130 aa8.82□□□□□ -1
POLR1B-209ENST00000448770 NKAPP1Q8N9T2 125 aa8.82□□□□□ -1
POLR1B-209ENST00000448770 OCR1Q9BZK8 76 aa8.82□□□□□ -1
POLR1B-209ENST00000448770 DNAH3Q8TD57 4116 aa8.82□□□□□ -1
POLR1B-209ENST00000448770 IGLV5-48A0A075B6I7 105 aa8.81□□□□□ -1
POLR1B-209ENST00000448770 DEFB131BA0A096LNP1 70 aa8.81□□□□□ -1
POLR1B-209ENST00000448770 A0A1W2PNM2 257 aa8.81□□□□□ -1
POLR1B-209ENST00000448770 TMEM254Q8TBM7 123 aa8.81□□□□□ -1
POLR1B-209ENST00000448770 FP248Q71RG6 208 aaPredicted RBP8.8□□□□□ -1
POLR1B-209ENST00000448770 FBN1P35555 2871 aaKnown RBP8.8□□□□□ -1
POLR1B-209ENST00000448770 ERC2-IT1O76042 136 aa8.79□□□□□ -1
POLR1B-209ENST00000448770 TNP2Q05952 138 aa8.79□□□□□ -1
POLR1B-209ENST00000448770 Q6ZRX8 168 aa8.79□□□□□ -1
POLR1B-209ENST00000448770 DNAH10Q8IVF4 4471 aa8.79□□□□□ -1
POLR1B-209ENST00000448770 MAST4O15021 2626 aa8.79□□□□□ -1
POLR1B-209ENST00000448770 STAB1Q9NY15 2570 aa8.78□□□□□ -1
POLR1B-209ENST00000448770 DNAH10OSP0CZ25 163 aa8.78□□□□□ -1
POLR1B-209ENST00000448770 IGLV1-50A0A075B6I6 118 aa8.77□□□□□ -1.01
POLR1B-209ENST00000448770 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
POLR1B-209ENST00000448770 A0A0U1RQV1 116 aa8.76□□□□□ -1.01
POLR1B-209ENST00000448770 TLX1NBP0CAT3 122 aa8.76□□□□□ -1.01
POLR1B-209ENST00000448770 SPRR1AP35321 89 aa8.76□□□□□ -1.01
POLR1B-209ENST00000448770 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
POLR1B-209ENST00000448770 A0A0G2JQZ4 141 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 F8WDY8 70 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 FAM229BQ4G0N7 80 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 LINC00588Q9Y4M8 146 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 NOTCH1P46531 2555 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 LYSTQ99698 3801 aa8.75□□□□□ -1.01
POLR1B-209ENST00000448770 HIGD2AQ9BW72 106 aa8.74□□□□□ -1.01
POLR1B-209ENST00000448770 PLA2G2DQ9UNK4 145 aa8.74□□□□□ -1.01
POLR1B-209ENST00000448770 C1orf137Q5JT78 98 aa8.74□□□□□ -1.01
POLR1B-209ENST00000448770 HUWE1Q7Z6Z7 4374 aaKnown RBP8.73□□□□□ -1.01
POLR1B-209ENST00000448770 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
POLR1B-209ENST00000448770 NDUFC1O43677 76 aa8.73□□□□□ -1.01
POLR1B-209ENST00000448770 PRYO14603 147 aa8.72□□□□□ -1.01
POLR1B-209ENST00000448770 FAM30AQ9NZY2 134 aa8.72□□□□□ -1.01
POLR1B-209ENST00000448770 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
POLR1B-209ENST00000448770 ETDCA0A1B0GVM5 59 aa8.72□□□□□ -1.01
POLR1B-209ENST00000448770 MRAPQ8TCY5 172 aa8.72□□□□□ -1.01
POLR1B-209ENST00000448770 DSCR10P59022 87 aa8.71□□□□□ -1.01
POLR1B-209ENST00000448770 KRTAP24-1Q3LI83 254 aa8.71□□□□□ -1.01
POLR1B-209ENST00000448770 Q8NBF4 154 aa8.71□□□□□ -1.01
POLR1B-209ENST00000448770 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
POLR1B-209ENST00000448770 DNAH9Q9NYC9 4486 aa8.7□□□□□ -1.02
POLR1B-209ENST00000448770 FUSP35637 526 aaKnown RBP eCLIP8.7□□□□□ -1.02
POLR1B-209ENST00000448770 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
POLR1B-209ENST00000448770 PRB2P02812 416 aaPredicted RBP8.69□□□□□ -1.02
POLR1B-209ENST00000448770 K7EQZ3 153 aa8.69□□□□□ -1.02
POLR1B-209ENST00000448770 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
POLR1B-209ENST00000448770 SPRR4Q96PI1 79 aa8.69□□□□□ -1.02
POLR1B-209ENST00000448770 UBE2BP63146 152 aa8.66□□□□□ -1.02
POLR1B-209ENST00000448770 LCE6AA0A183 80 aa8.65□□□□□ -1.02
POLR1B-209ENST00000448770 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.02
POLR1B-209ENST00000448770 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.02
POLR1B-209ENST00000448770 NBEAL1Q6ZS30 2694 aa8.64□□□□□ -1.03
POLR1B-209ENST00000448770 SRRM2Q9UQ35 2752 aaKnown RBP8.64□□□□□ -1.03
POLR1B-209ENST00000448770 DEFB116Q30KQ4 102 aa8.63□□□□□ -1.03
POLR1B-209ENST00000448770 PRLHP81277 87 aa8.62□□□□□ -1.03
POLR1B-209ENST00000448770 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
POLR1B-209ENST00000448770 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
POLR1B-209ENST00000448770 A0A1B0GW54 56 aa8.61□□□□□ -1.03
POLR1B-209ENST00000448770 IGFL1Q6UW32 110 aa8.61□□□□□ -1.03
POLR1B-209ENST00000448770 CSMD3Q7Z407 3707 aa8.61□□□□□ -1.03
POLR1B-209ENST00000448770 A0A096LNI7 61 aa8.61□□□□□ -1.03
POLR1B-209ENST00000448770 MPLKIPQ8TAP9 179 aa8.6□□□□□ -1.03
POLR1B-209ENST00000448770 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
POLR1B-209ENST00000448770 COL6A5A8TX70 2615 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms