RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ZNF73O43830 326 aaPredicted RBP9.69□□□□□ -0.86
SF1-211ENST00000448404 LAMTOR3Q9UHA4 124 aa9.69□□□□□ -0.86
SF1-211ENST00000448404 RPL37AP8A6NKH3 93 aa9.69□□□□□ -0.86
SF1-211ENST00000448404 NDUFC2-KCTD14E9PQ53 114 aa9.69□□□□□ -0.86
SF1-211ENST00000448404 SYCNQ0VAF6 134 aa9.69□□□□□ -0.86
SF1-211ENST00000448404 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
SF1-211ENST00000448404 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
SF1-211ENST00000448404 TM2D3Q9BRN9 247 aa9.68□□□□□ -0.86
SF1-211ENST00000448404 TRAV10A0A0B4J240 114 aa9.67□□□□□ -0.86
SF1-211ENST00000448404 CCKP06307 115 aa9.67□□□□□ -0.86
SF1-211ENST00000448404 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
SF1-211ENST00000448404 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
SF1-211ENST00000448404 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
SF1-211ENST00000448404 PLECQ15149 4684 aaKnown RBP9.66□□□□□ -0.86
SF1-211ENST00000448404 TMEM256-PLSCR3K7ERE1 68 aa9.65□□□□□ -0.86
SF1-211ENST00000448404 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
SF1-211ENST00000448404 DNHD1Q96M86 4753 aa9.63□□□□□ -0.87
SF1-211ENST00000448404 COX7BP24311 80 aa9.63□□□□□ -0.87
SF1-211ENST00000448404 DEFB105AQ8NG35 78 aa9.63□□□□□ -0.87
SF1-211ENST00000448404 FAM236DA0A1B0GTK5 79 aa9.62□□□□□ -0.87
SF1-211ENST00000448404 FAM236CP0DP71 79 aa9.62□□□□□ -0.87
SF1-211ENST00000448404 C7orf33Q8WU49 177 aa9.61□□□□□ -0.87
SF1-211ENST00000448404 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
SF1-211ENST00000448404 M0R378 163 aa9.6□□□□□ -0.87
SF1-211ENST00000448404 LINC00336Q6ZUF6 198 aa9.6□□□□□ -0.87
SF1-211ENST00000448404 RBM3P98179 157 aaKnown RBP9.6□□□□□ -0.87
SF1-211ENST00000448404 ELOF1P60002 83 aaKnown RBP9.59□□□□□ -0.87
SF1-211ENST00000448404 NKAPP1Q8N9T2 125 aa9.58□□□□□ -0.88
SF1-211ENST00000448404 SNURFQ9Y675 71 aa9.58□□□□□ -0.88
SF1-211ENST00000448404 JMJD7-PLA2G4BH0Y9G9 81 aa9.58□□□□□ -0.88
SF1-211ENST00000448404 UBL5Q9BZL1 73 aa9.58□□□□□ -0.88
SF1-211ENST00000448404 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.58□□□□□ -0.88
SF1-211ENST00000448404 SCXQ7RTU7 201 aa9.58□□□□□ -0.88
SF1-211ENST00000448404 IGKV2-24A0A0C4DH68 120 aa9.57□□□□□ -0.88
SF1-211ENST00000448404 H7BZZ5 65 aa9.57□□□□□ -0.88
SF1-211ENST00000448404 Q6ZQT0 140 aa9.57□□□□□ -0.88
SF1-211ENST00000448404 STARD9Q9P2P6 4700 aa9.57□□□□□ -0.88
SF1-211ENST00000448404 ATP5EP2Q5VTU8 51 aa9.56□□□□□ -0.88
SF1-211ENST00000448404 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
SF1-211ENST00000448404 MUC7Q8TAX7 377 aa9.55□□□□□ -0.88
SF1-211ENST00000448404 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.885e-13■□□□□ 10.2
SF1-211ENST00000448404 HAMPP81172 84 aa9.54□□□□□ -0.88
SF1-211ENST00000448404 RMI2Q96E14 147 aa9.54□□□□□ -0.88
SF1-211ENST00000448404 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
SF1-211ENST00000448404 PRO0628Q9UI54 55 aa9.54□□□□□ -0.88
SF1-211ENST00000448404 SERP1Q9Y6X1 66 aa9.54□□□□□ -0.88
SF1-211ENST00000448404 ST20-AS1Q8NBB2 130 aa9.53□□□□□ -0.88
SF1-211ENST00000448404 MEGF8Q7Z7M0 2845 aa9.53□□□□□ -0.88
SF1-211ENST00000448404 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
SF1-211ENST00000448404 TGP01266 2768 aa9.52□□□□□ -0.89
SF1-211ENST00000448404 A0A0G2JQZ4 141 aa9.51□□□□□ -0.89
SF1-211ENST00000448404 A0A1W2PNN7 141 aa9.51□□□□□ -0.89
SF1-211ENST00000448404 TRAV7A0A075B6U4 112 aa9.51□□□□□ -0.89
SF1-211ENST00000448404 CHTF8P0CG12 524 aa9.51□□□□□ -0.89
SF1-211ENST00000448404 UBE2DNLQ8IWF7 75 aa9.51□□□□□ -0.89
SF1-211ENST00000448404 F8WEM9 126 aa9.5□□□□□ -0.89
SF1-211ENST00000448404 ERC2-IT1O76042 136 aa9.5□□□□□ -0.89
SF1-211ENST00000448404 Q9BRP9 147 aa9.5□□□□□ -0.89
SF1-211ENST00000448404 FP248Q71RG6 208 aaPredicted RBP9.49□□□□□ -0.89
SF1-211ENST00000448404 LINC00474Q9P2X8 69 aa9.49□□□□□ -0.89
SF1-211ENST00000448404 LINC01547P58512 204 aaPredicted RBP9.49□□□□□ -0.89
SF1-211ENST00000448404 KMT2AQ03164 3969 aa9.49□□□□□ -0.89
SF1-211ENST00000448404 EPM2AB3EWF7 344 aa9.48□□□□□ -0.89
SF1-211ENST00000448404 PSCAO43653 123 aa9.48□□□□□ -0.89
SF1-211ENST00000448404 A0A096LNI7 61 aa9.47□□□□□ -0.89
SF1-211ENST00000448404 C3orf84H3BNL1 204 aa9.47□□□□□ -0.89
SF1-211ENST00000448404 Q6ZVQ6 151 aa9.47□□□□□ -0.89
SF1-211ENST00000448404 Q8N9L7 120 aa9.47□□□□□ -0.89
SF1-211ENST00000448404 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
SF1-211ENST00000448404 Q8N377 158 aa9.46□□□□□ -0.89
SF1-211ENST00000448404 KLKP1Q107X0 134 aa9.46□□□□□ -0.9
SF1-211ENST00000448404 IGLV1-50A0A075B6I6 118 aa9.45□□□□□ -0.9
SF1-211ENST00000448404 LOC110117498A0A087WWA1 95 aa9.45□□□□□ -0.9
SF1-211ENST00000448404 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
SF1-211ENST00000448404 SMIM26A0A096LP01 95 aa9.44□□□□□ -0.9
SF1-211ENST00000448404 TRBV7-4A0A0J9YYF1 115 aa9.44□□□□□ -0.9
SF1-211ENST00000448404 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
SF1-211ENST00000448404 PRLHP81277 87 aa9.43□□□□□ -0.9
SF1-211ENST00000448404 KRTAP11-1Q8IUC1 163 aa9.43□□□□□ -0.9
SF1-211ENST00000448404 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
SF1-211ENST00000448404 TRBV7-6A0A0J9YX20 115 aa9.42□□□□□ -0.9
SF1-211ENST00000448404 A0A0U1RQV1 116 aa9.42□□□□□ -0.9
SF1-211ENST00000448404 TLX1NBP0CAT3 122 aa9.42□□□□□ -0.9
SF1-211ENST00000448404 UBE2BP63146 152 aa9.42□□□□□ -0.9
SF1-211ENST00000448404 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
SF1-211ENST00000448404 Q6ZRX8 168 aa9.42□□□□□ -0.9
SF1-211ENST00000448404 BRK1Q8WUW1 75 aa9.41□□□□□ -0.9
SF1-211ENST00000448404 DYNC2H1Q8NCM8 4307 aaKnown RBP9.41□□□□□ -0.9
SF1-211ENST00000448404 PANO1I0J062 215 aa9.39□□□□□ -0.91
SF1-211ENST00000448404 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
SF1-211ENST00000448404 BCE1O60756 84 aa9.38□□□□□ -0.91
SF1-211ENST00000448404 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
SF1-211ENST00000448404 B9D2Q9BPU9 175 aa9.36□□□□□ -0.91
SF1-211ENST00000448404 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
SF1-211ENST00000448404 F8WDY8 70 aa9.36□□□□□ -0.91
SF1-211ENST00000448404 DNAH2Q9P225 4427 aa9.36□□□□□ -0.91
SF1-211ENST00000448404 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
SF1-211ENST00000448404 BPY2O14599 106 aa9.35□□□□□ -0.91
SF1-211ENST00000448404 FRAS1Q86XX4 4008 aa9.35□□□□□ -0.91
SF1-211ENST00000448404 VPS13DQ5THJ4 4388 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms